PDA

View Full Version : newbie looking for help with morleydna ysnp subclade predictor



choilledun
08-13-2018, 02:28 PM
i was looking for help in understand my results.

most likely results I2a1b CTS11030, CTS1293, CTS176, CTS1802, CTS5375, CTS5985, CTS7218, CTS8239, CTS8486, L178/S328, M423

thank you

choilledun
08-13-2018, 02:38 PM
A0-T AF3, L1085, L1089, L1090, L1093, L1095, L1098, L1099, L1101, L1105, L1116, L1118, L1120, L1121, L1123, L1124, L1125, L1127, L1128, L1129, L1130, L1132, L1135, L1136, L1137, L1142, L1143, L1145, L1150, L1155, L1235
A1 CTS3331, P305, V168, V171, V174, V238, V241, V250, L985, L986, L989, L1002, L1003, L1004, L1005, L1009, L1013, L1053, L1084, L1112, L1153, V161R
A1b P108, V221
BT M139, M42, M94/PF1081, L440, L1061/PF1101, L1062/PF302, PK1, PF1407/V29, PF1411/V59, PF1412/V64, PF1406/V102, V187, L413/PF1409/V31, L418, L438, L604/PF1243, L957, L962, L969, L970/PF1065, L971, L977, L1060/PF1021, M91, M299, P97, PAGE65/SRY1532/SRY10831R, V202, PF1410/V235
CT PF1269, PF258, CTS125, CTS5318, PF954, M294, PF779, PF110, PF821, PF1276, V189, PF192, CTS10362, CTS109, CTS11358, CTS11575, CTS1996, CTS3431, CTS3662, CTS4364, CTS4368, CTS4740, CTS5457, CTS5532, CTS6383, CTS6800, CTS6907, CTS7922, CTS7933, CTS8243, CTS8980, CTS9828, M168/PF1416, PF1016, PF1029, PF1031, PF1040, PF1046, PF1061, PF1092, PF1097, PF1203, PF210, PF212, PF223, PF234, PF263, PF272, PF278, PF292, PF316, PF325, PF342, PF500, PF667, PF719, PF725, PF796, PF803, PF815, PF840, PF844, PF892, PF937, PF951, PF970, V52, V9, P9R
CF P143
F F2048, PF2745, F2075, PF2631, F1320, F2142, F1302, F3111, F2710, F2985, L498, PF2599, CTS11726, CTS12632, CTS3536, CTS3654, CTS3868, CTS3996, CTS4443, CTS6135, F1046, F1209, F1329, F1704, F1714, F1753, F1767, F2155, F2402, F2587, F2688, F2837, F2993, F3136, F3335, F3556, F3692, F719, L350, L468, L470, PF2591, PF2593, PF2600, PF2608, PF2611, PF2615, PF2624, PF2643, PF2747, PF2748, PF2749, PF2770, V186, V205, L132R, M89/PF2746, M235/PAGE80/PF2665, PF2704/P14, PF2741/P135, PF2762/P136, PF2655/P138, PF2602/P141, PF2617/P145, PF2623/P146, PF2734/P148, PF2625/P151, PF2706/P158, PF2717/P159, PF2618/P160, PF2702/P166, PF2632/P187, M213/P137/PAGE38, P133, P134, P139, P140, P142, P149, P157, P161, P163, P316
IJK M523/L15/PF3492/S137, M522/L16/PF3493/S138
IJ L748, CTS6932, CTS9240, F1450, F1460, F2345, F2366, F2794, F3368, F3402, F4188, F922, L403, PF3504, PF3514, PF3515, PF3517, PF3518, PF3534, PF3560, PF3561, PF3562, YSC0000056, YSC0000265, PF3554/P123, PF3553/P124, PF3558/P126, PF3526/P127, PF3525/P130/S22, M429/P125, P129, S2
I PF3618, CTS10058, CTS11441, CTS2193, CTS2514/PF3706, CTS2536, CTS3517, CTS4088, CTS4848, CTS4982, CTS5650, CTS5908, CTS6265, CTS674, CTS7329, CTS7502, CTS7831, CTS8333, CTS8345, CTS8420, CTS88, CTS8876, CTS9264, L578, L751, L755, L756, L758, L772, PF3574, PF3575, PF3578, PF3586, PF3588, PF3590, PF3594, PF3596, PF3600, PF3604, PF3605, PF3611, PF3612, PF3616, PF3622, PF3625, PF3639, PF3640, PF3641, PF3642, PF3654, PF3660, PF3666, PF3672, PF3675, PF3677, PF3686, PF3694, PF3780, PF3800, PF3804, PF3806, PF3807, PF3809, PF3811, PF3814, PF3815, PF3819, PF3822, PF3836, PF3837, YSC0000256, YSC0000260, YSC0000267, YSC0000272, YSC0000280, YSC0000281, YSC0000298, YSC0000300, M170/PF3715, L41/PF3787, M258/PF3721, P19R, P38, P212, U179
I2 PF3634, PF3623, PF3664, CTS3296, CTS4039, CTS5727, PF3595, PF3607, PF3621, PF3626, PF3644, PF3651, PF3652, PF3657, PF3658, PF3667, PF3669, PF3671, PF3798, PF3801, PF3802, PF3812, PF3820, PF3849, L68/S329, M438/P215/PF3853/S31
I2a PF3573, PF3876, L460/PF3647/S238
I2a1 CTS410, CTS5044, PF3606, PF3638, PF3966, PF4058, P37R
I2a1a PF4076, PF3988, CTS10400, CTS1049, CTS11143, CTS11548, CTS1272, CTS3353, CTS5932, CTS6027, CTS7373, CTS7671, L158/PF4073/S433, M26/PF4056, PF3576, PF3577, PF3584, PF3609, PF3865, PF3875, PF3962, PF3963, PF3965, PF3968, PF3969, PF3971, PF3972, PF3973, PF3975, PF3977, PF3978, PF3980, PF4046, PF4047, PF4048, PF4050, PF4061, PF4069, PF4075, PF4079, PF4080, PF4098, L159/S169R
I2a1a1 CTS11229, CTS11972, CTS2111, CTS6406, CTS7201, CTS8038, CTS9062, L160/PF4013, PF4053, PF4060, PF4086, PF4089, PF4096
I2a1a1~1 PF4088
I2a1a1~2 F1295
I2a1a~1 L247R, F1915, YSC0000078
I2a1a~2 PF6947
I2a1a~3 CTS8632
I2a1b CTS11030, CTS1293, CTS176, CTS1802, CTS5375, CTS5985, CTS7218, CTS8239, CTS8486, L178/S328, M423
I2a1b1 M359/P41R
I2a1b2 L161/S185R
I2a1b2~1 F2633
I2a1b2~2 L170
I2a1b2~3 F3744
I2a1b2~4 PF4135
I2a1b3 CTS1027, CTS1846, CTS4012, CTS7175, CTS7213, CTS9349, F3145, L621/S392
I2a1b3~1 CTS10936, CTS11768, CTS4002
I2a1c L233/S183, L485
I2a1~1 L340

choilledun
08-13-2018, 07:20 PM
Admix Results (sorted):

# Population Percent
1 North_Atlantic 43.78
2 Baltic 19.47
3 West_Med 13.56
4 Amerindian 8.09
5 East_Med 6.98
6 West_Asian 6.36


Finished reading population data. 204 populations found.
13 components mode.

--------------------------------

Least-squares method.

Using 1 population approximation:
1 West_German 8.416496
2 South_Dutch 8.831864
3 French 11.016146
4 Southeast_English 11.106226
5 North_German 12.353237
6 Orcadian 12.600924
7 Southwest_English 12.698088
8 Danish 13.144314
9 North_Dutch 13.144670
10 Irish 13.259393
11 West_Scottish 13.693085
12 Austrian 14.871096
13 Norwegian 15.234203
14 East_German 16.293634
15 Swedish 16.295254
16 Spanish_Cataluna 18.020571
17 Hungarian 18.624224
18 Portuguese 19.176994
19 Spanish_Castilla_Y_Leon 19.189676
20 Spanish_Galicia 19.274786

Using 2 populations approximation:
1 50% West_German +50% West_German 8.416496


Using 3 populations approximation:
1 50% Irish +25% Irish +25% West_Sicilian 7.933840


Using 4 populations approximation:
++++++++++++++++++++++++++++++++++++++++++++++++++ ++++++++++++++++++++++++++++++++++++++++++++++++++ +++++++++++++
1 Irish + Irish + Irish + West_Sicilian 7.933840
2 Greek_Thessaly + Irish + West_Scottish + West_Scottish 7.961804
3 Irish + Irish + Orcadian + West_Sicilian 7.962286
4 Irish + Irish + Norwegian + West_Sicilian 7.964523
5 Greek_Thessaly + Irish + Irish + West_Scottish 7.968762
6 Greek_Thessaly + West_Scottish + West_Scottish + West_Scottish 7.970806
7 Irish + Irish + West_Scottish + West_Sicilian 7.980317
8 Irish + Norwegian + West_Scottish + West_Sicilian 7.991580
9 Greek_Thessaly + Irish + Irish + Irish 7.995108
10 Greek_Thessaly + Orcadian + West_Scottish + West_Scottish 8.003580
11 Irish + Irish + Italian_Abruzzo + Orcadian 8.004163
12 Greek_Thessaly + Irish + Orcadian + West_Scottish 8.005142
13 Irish + Italian_Abruzzo + Orcadian + Orcadian 8.011540
14 Irish + Orcadian + West_Scottish + West_Sicilian 8.015398
15 Greek_Thessaly + Irish + Irish + Orcadian 8.028194
16 Irish + Norwegian + Orcadian + West_Sicilian 8.028843
17 Norwegian + West_Scottish + West_Scottish + West_Sicilian 8.029604
18 Irish + Italian_Abruzzo + Orcadian + West_Scottish 8.034044
19 Irish + Orcadian + Orcadian + West_Sicilian 8.034168
20 Irish + Irish + Irish + Italian_Abruzzo 8.038807

choilledun
08-14-2018, 09:50 PM
L178/S328, M423