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Calamus
03-23-2014, 04:13 PM
I am interested in sharing Full genomes results with other in Haplogroup I1.
By comparing results, we will hopefully be able to further define the I1 Y-DNA haplogroup tree.


Here are my private SNPs from FGC:
3303478 T A FGC9453+
3388822 T C FGC9454+
3668564 C G FGC9455+
4444936 G A FGC9456+
4987878 A G FGC9457+
5551207 T C FGC9458+
5834796 G T FGC9459+
6103010 A G FGC9460+
6672477 G A FGC9461+
6695480 C T FGC9462+
7197645 G A FGC9463+
7204707 T C FGC9464+
7338341 A G FGC9465+
7456400 A G FGC8764+
7584061 C T FGC9466+
8035203 T C FGC9467+
8208733 T C FGC9468+
8839135 T G FGC9469+
13140276 G T FGC9470+
13592509 G A FGC9471+
13940998 C T FGC9472+
14361248 T C FGC9473+
14383315 G A FGC9474+
14389871 G A FGC9475+
14522697 C G FGC9476+
14592731 G A FGC9477+
14787756 G A FGC9478+
14823182 G A FGC9479+
15275092 G T FGC9480+
16315573 A G FGC9481+
16524548 C A FGC9482+; site of S18432
16790229 T C FGC9483+
17246495 A G FGC9484+
18395614 A T FGC9485+
18593683 A T FGC9486+
18949040 T A FGC9487+
18989021 C A FGC9488+
19061754 G A FGC9489+
19306350 G A FGC9490+
21094601 T A FGC9491+
21384837 C A FGC9492+
21426337 A G FGC9493+
21657006 G C FGC9494+
22208780 C A FGC9495+
22714704 G C FGC9496+
23483502 C G FGC9497+
25031165 T C FGC9498+

and my private INDELs:
2919286 GTAT GT FGC9499+
3709796 TTGGTGG TTGG FGC9500+
3483637 GA GAGACA FGC8694+
18756845 TGG TG FGC9501+
23809031 ACCCC ACCC FGC9502+
24476189 CA C FGC9503+

pyromatic
03-28-2014, 04:04 PM
You and I already found that we share 3 of the following SNPs (between I-L813 and I-Z74),
My private SNPs:
4043226 G A FGC8758+
4892097 T C FGC8759+
6020743 G A FGC8760+
6378130 G T FGC8761+
7069535 C T FGC8762+
7453026 C T FGC8763+
7456400 A G FGC8764+
7624088 G C FGC8765+
7676734 T C FGC8766+
8578046 T A FGC8767+
9084531 A C FGC8768+
9095823 A T FGC8769+
9375815 G T FGC8770+
13197146 C T FGC8771+
13228700 C A FGC8772+
13925632 C T FGC8773+
15438493 T G FGC8774+
15898839 A T FGC8775+
16540880 G A FGC8776+
16626822 T C FGC8777+
17022606 C T FGC8778+
17947290 T G FGC8779+
18088372 G T FGC8780+
19252940 C T FGC8781+
19335055 T C FGC8782+
20818420 A T FGC8783+
21935820 C A FGC8784+
22469979 A T FGC3510+
22473990 T A FGC8785+
22489745 A T FGC8786+
23045728 A G FGC8787+
28764933 G A FGC8788+

And my private INDEL

17062505 TAAA TA FGC8789+

All of the above are of > 99% or 95% reliability per FGC.

pyromatic
03-28-2014, 07:29 PM
I submitted my data for analysis by the yfull team. While I am still digging through their analysis, I am very pleased with both FGC and YFull. The following are the best quality SNPs I was given by YFull.

*ChrY: 2807122***YFS057509 C to T
*ChrY: 4043226***YFS057521 G to A
*ChrY: 4892097***YFS057541 T to C
*ChrY: 6020743***YFS057551 G to A
*ChrY: 6926080***YFS057564 A to G
*ChrY: 7069535***YFS057568 C to T
*ChrY: 7676734***YFS057578 T to C
*ChrY: 8578046***YFS057584 T to A
*ChrY: 9095823***YFS057587 A to T
*ChrY: 9375815***YFS057588 G to T
*ChrY: 13925632***YFS057600 C to T
*ChrY: 15438493***YFS057616 T to G
*ChrY: 15898839***YFS057625 A to T
*ChrY: 16540880***YFS057634 G to A
*ChrY: 16626822***YFS057635 T to C
*ChrY: 17022606***YFS057643 C to T
*ChrY: 17581353***YFS057649 T to A
*ChrY: 17648373***YFS057651 G to C
*ChrY: 17947290***YFS057653 T to G
*ChrY: 18088372***YFS057657 G to T
*ChrY: 19252940***YFS057664 C to T
*ChrY: 19335055***YFS057668 T to C
*ChrY: 20818420***YFS057677 A to T
*ChrY: 21935820***YFS057689 C to A
*ChrY: 22216687***YFS057694 A to T
*ChrY: 23045728***YFS057942 A to G
*ChrY: 28764933***YFS057967 G to A

C.Goodell
07-07-2014, 09:34 PM
Downstream of z74

7549521 Consensus allele: C Reference allele: G Named FGC12551 found in 4 big y kits

Downstream of Cts2208 (Not found in L287 )

6834008 Consensus allele: A Reference allele: G Named FGC12553 found in 2 Big Y Kits
8885613 Consensus allele: T Reference allele: C Named FGC12554 found in 2 Big Y Kits
8885761 Consensus allele: T Reference allele: C Named FGC12555 found in 2 Big Y Kits
15614381 Consensus allele: G Reference allele: T Named FGC12557 found in 2 Big Y Kits
16402552 Consensus allele: A Reference allele: G Named FGC12558 found in 2 Big Y Kits
16475648 Consensus allele: T Reference allele: C Named FGC12559 found in 2 Big Y Kits
17113406 Consensus allele: G Reference allele: C Named FGC12560 found in 2 Big Y Kits
18608123 Consensus allele: G Reference allele: A Named FGC12561 found in 2 Big Y kits
19318850 Consensus allele: C Reference allele: T Named FGC12562 found in 2 Big Y Kits
22302920 Consensus allele: A Reference allele: T Named FGC12563 found in 2 Big Y Kits
23613999 Consensus allele: C Reference allele: T Named FGC12564 found in 2 Big Y Kits

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