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View Full Version : How Does Anzick-1 Score On Eurogenes K=7/ K=8



Neo
01-31-2015, 02:09 AM
I am aware Anzick-1 has ANE but lets speak in terms of his non-ANE component(s). How does this ancient Native American sample score on K=7/K=8? Which Eurasians is he closely related to when you deduct its ANE admixture?

As a matter of fact how do Amerindians socre on K=6 or K=8?

jesus
01-31-2015, 02:25 AM
ANE K7

Population
ANE 34.01%
ASE 3.52%
WHG-UHG 5.15%
East_Eurasian 55.30%
West_African 0.08%
East_African 1.95%
ENF -



Eurogenes K13 Oracle results:

K13 Oracle ref data revised 21 Nov 2013

Kit F999919

Admix Results (sorted):

# Population Percent
1 Amerindian 89.1
2 Siberian 4.8
3 Baltic 2.36
4 West_Med 1.17
5 East_Asian 1.16
6 North_Atlantic 0.57
7 Oceanian 0.42
8 Northeast_African 0.41

Single Population Sharing:

# Population (source) Distance
1 Pima 1.37
2 Mayan 6.04
3 Karitiana 13.36
4 North_Amerindian 25.07
5 East_Greenlander 67.81
6 West_Greenlander 70.14
7 MA-1 85.38
8 Chukchi 94.27
9 Koryak 104.59
10 Shors 105.82
11 Aghan_Hazara 106.1
12 Uygur 106.19
13 Afghan_Turkmen 106.56
14 Uzbeki 106.61
15 Turkmen 106.83
16 Tatar 106.9
17 Nogay 106.91
18 Hazara 107.07
19 Afghan_Tadjik 107.38
20 Tadjik 107.67

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 99.6% Pima + 0.4% Lithuanian @ 1.31
2 99.7% Pima + 0.3% Estonian @ 1.32
3 99.7% Pima + 0.3% Estonian_Polish @ 1.32
4 99.7% Pima + 0.3% Belorussian @ 1.32
5 99.7% Pima + 0.3% Russian_Smolensk @ 1.32
6 99.7% Pima + 0.3% Erzya @ 1.32
7 99.7% Pima + 0.3% La_Brana-1 @ 1.32
8 99.7% Pima + 0.3% Ukrainian_Belgorod @ 1.32
9 99.7% Pima + 0.3% Southwest_Russian @ 1.32
10 99.7% Pima + 0.3% Polish @ 1.32
11 99.7% Pima + 0.3% Kargopol_Russian @ 1.32
12 99.7% Pima + 0.3% East_Finnish @ 1.32
13 99.7% Pima + 0.3% Finnish @ 1.32
14 99.7% Pima + 0.3% Ukrainian @ 1.33
15 99.7% Pima + 0.3% Ukrainian_Lviv @ 1.33
16 99.7% Pima + 0.3% South_Polish @ 1.33
17 99.7% Pima + 0.3% Southwest_Finnish @ 1.33
18 99.7% Pima + 0.3% Croatian @ 1.34
19 99.7% Pima + 0.3% Chuvash @ 1.34
20 99.8% Pima + 0.2% North_Swedish @ 1.34

jesus
01-31-2015, 02:30 AM
As a matter of fact how do Amerindians socre on K=6 or K=8?

Karitiana

42.6% ANE
57% East Eurasian

https://docs.google.com/spreadsheets/d/1x8pm8sVcHqceiNFJMO082kxaBF5ePr4__bAK05VQRFw/edit#gid=62882571

Generalissimo
01-31-2015, 02:30 AM
The high coverage sequence from the VCF file here (http://www.cbs.dtu.dk/suppl/clovis/) scores ~40% ANE using ADMIXTURE directly (not a calculator algorithm). The rest is East Eurasian and ~1% Oceanian.

Neo
01-31-2015, 07:34 PM
Karitiana

42.6% ANE
57% East Eurasian

https://docs.google.com/spreadsheets/d/1x8pm8sVcHqceiNFJMO082kxaBF5ePr4__bAK05VQRFw/edit#gid=62882571


ANE K7

Population
ANE 34.01%
ASE 3.52%
WHG-UHG 5.15%
East_Eurasian 55.30%
West_African 0.08%
East_African 1.95%
ENF -



Eurogenes K13 Oracle results:

K13 Oracle ref data revised 21 Nov 2013

Kit F999919

Admix Results (sorted):

# Population Percent
1 Amerindian 89.1
2 Siberian 4.8
3 Baltic 2.36
4 West_Med 1.17
5 East_Asian 1.16
6 North_Atlantic 0.57
7 Oceanian 0.42
8 Northeast_African 0.41

Single Population Sharing:

# Population (source) Distance
1 Pima 1.37
2 Mayan 6.04
3 Karitiana 13.36
4 North_Amerindian 25.07
5 East_Greenlander 67.81
6 West_Greenlander 70.14
7 MA-1 85.38
8 Chukchi 94.27
9 Koryak 104.59
10 Shors 105.82
11 Aghan_Hazara 106.1
12 Uygur 106.19
13 Afghan_Turkmen 106.56
14 Uzbeki 106.61
15 Turkmen 106.83
16 Tatar 106.9
17 Nogay 106.91
18 Hazara 107.07
19 Afghan_Tadjik 107.38
20 Tadjik 107.67

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 99.6% Pima + 0.4% Lithuanian @ 1.31
2 99.7% Pima + 0.3% Estonian @ 1.32
3 99.7% Pima + 0.3% Estonian_Polish @ 1.32
4 99.7% Pima + 0.3% Belorussian @ 1.32
5 99.7% Pima + 0.3% Russian_Smolensk @ 1.32
6 99.7% Pima + 0.3% Erzya @ 1.32
7 99.7% Pima + 0.3% La_Brana-1 @ 1.32
8 99.7% Pima + 0.3% Ukrainian_Belgorod @ 1.32
9 99.7% Pima + 0.3% Southwest_Russian @ 1.32
10 99.7% Pima + 0.3% Polish @ 1.32
11 99.7% Pima + 0.3% Kargopol_Russian @ 1.32
12 99.7% Pima + 0.3% East_Finnish @ 1.32
13 99.7% Pima + 0.3% Finnish @ 1.32
14 99.7% Pima + 0.3% Ukrainian @ 1.33
15 99.7% Pima + 0.3% Ukrainian_Lviv @ 1.33
16 99.7% Pima + 0.3% South_Polish @ 1.33
17 99.7% Pima + 0.3% Southwest_Finnish @ 1.33
18 99.7% Pima + 0.3% Croatian @ 1.34
19 99.7% Pima + 0.3% Chuvash @ 1.34
20 99.8% Pima + 0.2% North_Swedish @ 1.34

Do Karitina and Anzick-1 have score any ANI or ASI on any of the K runs? I am surprised Anzick is scoring neglible ASE and East African.

Tomenable
09-26-2015, 01:16 AM
Karitiana

42.6% ANE
57% East Eurasian

https://docs.google.com/spreadsheets/d/1x8pm8sVcHqceiNFJMO082kxaBF5ePr4__bAK05VQRFw/edit#gid=62882571

This is probably no longer valid after the recent discovery of Australasian admixture in Karitiana ???

They must be less ANE than 43% because there will be no room left for Australasian component.