ChrisR
03-24-2016, 07:49 AM
Added by Debbie to http://www.isogg.org/wiki/Next_generation_sequencing#Resources
DNA (whole genome) Sequencing and library preparation.
genohub Comparison parameters:
Number of samples to sequence
Minimum coverage per sample OR Minimum number of reads per sample
Current two cheapest prices for 10 WGS 20x (https://genohub.com/shop-by-next-gen-sequencing-project/#query=3efbb09815):
Total: $11,250.00
Academic Provider Location: Darlinghurst, Australia
Instrument: Illumina - HiSeq X
Allocation: 6 lane(s) , 10 sample(s)
Turnaround: ~48 days
Sequencing: $10,200.00
Library prep: $1,000.00
Coverage per sample: ~21.1 X
Output per sample: ~67,500 Mb
Reads per sample: ~450 M Reads
Read length: 2 x 150 (Paired End)
Library type: DNA (whole genome)
Kit: Illumina TruSeq Nano DNA
Notes: For Human WGS Applications Only
Total: $13,118.00
Non-profit Provider CLIA Certified Location: Alabama, USA
Instrument: Illumina - HiSeq X
Allocation: 6 lane(s) , 10 sample(s)
Turnaround: ~45 days
Sequencing: $10,608.00
Library prep: $2,510.00
Coverage per sample: ~21.1 X
Output per sample: ~67,500 Mb
Reads per sample: ~450 M Reads
Read length: 2 x 150 (Paired End)
Library type: DNA (whole genome)
Kit: Illumina TruSeq DNA PCR-Free
Notes: Price includes quality control check, DNA library preparation, and library quality control check.
The Illumina - HiSeq X platform has almost no competition when the cost matters: the most expensive HiSeq X offer is $30,498.00 - only HiSeq 3000/4000 and HiSeq High-Output v4 platforms have offers under this price. Other platforms go well over $100,000.
Will be interesting to see how the prices develop. And by the way: FGC has very competitive offers, since they offer additional handling and interpretation. See the price for one WGS 20x of the same two providers above:
$1,850.00 and $1,989.00
DNA (whole genome) Sequencing and library preparation.
genohub Comparison parameters:
Number of samples to sequence
Minimum coverage per sample OR Minimum number of reads per sample
Current two cheapest prices for 10 WGS 20x (https://genohub.com/shop-by-next-gen-sequencing-project/#query=3efbb09815):
Total: $11,250.00
Academic Provider Location: Darlinghurst, Australia
Instrument: Illumina - HiSeq X
Allocation: 6 lane(s) , 10 sample(s)
Turnaround: ~48 days
Sequencing: $10,200.00
Library prep: $1,000.00
Coverage per sample: ~21.1 X
Output per sample: ~67,500 Mb
Reads per sample: ~450 M Reads
Read length: 2 x 150 (Paired End)
Library type: DNA (whole genome)
Kit: Illumina TruSeq Nano DNA
Notes: For Human WGS Applications Only
Total: $13,118.00
Non-profit Provider CLIA Certified Location: Alabama, USA
Instrument: Illumina - HiSeq X
Allocation: 6 lane(s) , 10 sample(s)
Turnaround: ~45 days
Sequencing: $10,608.00
Library prep: $2,510.00
Coverage per sample: ~21.1 X
Output per sample: ~67,500 Mb
Reads per sample: ~450 M Reads
Read length: 2 x 150 (Paired End)
Library type: DNA (whole genome)
Kit: Illumina TruSeq DNA PCR-Free
Notes: Price includes quality control check, DNA library preparation, and library quality control check.
The Illumina - HiSeq X platform has almost no competition when the cost matters: the most expensive HiSeq X offer is $30,498.00 - only HiSeq 3000/4000 and HiSeq High-Output v4 platforms have offers under this price. Other platforms go well over $100,000.
Will be interesting to see how the prices develop. And by the way: FGC has very competitive offers, since they offer additional handling and interpretation. See the price for one WGS 20x of the same two providers above:
$1,850.00 and $1,989.00