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Abdulaziz
04-09-2016, 07:09 AM
Hello,

I am wondering if the BAM file is available for sample HGDP00146 ? (from the Human Genome Diversity Project)

I have seen some HGDP samples on YFull.com ( In which they require the BAM file for their analysis )

I found the following links about the HGDP00146 sample:

ftp://ftp.cephb.fr/hgdp_supp14/

in the ( SNPlist.txt ) file.

and

ftp://ftp.cephb.fr/hgdp_supp10/Harvard_HGDP-CEPH/

It is in included in Panel 4 ( sample_panel4.txt )

I am not sure if the panel4.ped.gz or panel4.map.gz file can help in generating the BAM file for HGDP00146 ?