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Thread: Dante Labs (WGS)

  1. #511
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    After all my WGS raw data from Dante Labs- finally received on a HDD, now shifting to YFULL for detailed Y+Mt analysis. Sharing fisrt statistics.YFULL.stat-04-Novel-SNPs.pngYFULL.stat-01-Y.pngYFULL.stat-02-SNPs.pngYFULL.stat-03-STRs.pngYFULL.stat-05-Mt-DNA.png

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  3. #512
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    How long it takes from hard disk order ... to receive it?
    Last edited by Giosta; 03-20-2019 at 06:21 PM.

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  5. #513
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    Quote Originally Posted by Giosta View Post
    How long it takes from hard disk order ... to receive it?
    It took us (me and Dante) quite longer than expected:

    2018.08.15: Order WGS 30x (with shipment back included + explicit requirement for HDD with raw data included)

    2018.08.29HL shipment-initiated by Dante Labs
    2018.09.04HL shipment-back-departed from me to Dante (after some problems with the label for pre-payed shipment back)
    2018.09.05.DHL.shipment-delivered to Dante (RESULTS-EXPECTED-10--12-weeks according to Dante's commercial, i.e. 06-20 Nov.2018)

    2018.12.07: Link to my Rare diseases file- uploaded in the web site of Dante. Plus a refund notification.
    2018.12.09: Link to my VCF file- finally uploaded in the web site of Dante.

    2018.12.09: Question about the other raw data (Bam, fastq, fasta),
    2018.12.09: Dante Labs reply that if I need the pre-payed raw data cited, they can add me to their HDD shipping queue?!
    2018.12.10: My requirements for shipping without any other unncessary confirmations plus a tracking number of the shipment.

    2019.03.13: 30 weeks after VCF receiving (~43 weeks after ordering)- DHL-Shipment by DANTE of the HDD with all raw data.

    At the end of the day, the price-quality proved to be good enough for me (and hopefully shaping an industry standard trend rather than a limited time project with EU funding for ... let's say Rare diseases...which could explain their web site and other issues). Anyway realistic time-frame offer could have/can greatly help Dante's image and our patience
    Thank god everything is behind, now- shifting to next stage. Good luck to all of you guys and see you in other forums.

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  7. #514
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    There is some Dante data on the PGP site if anyone is interested in having a peek - also some Gencove* (Nebula Genomics?) low-read examples and a Chromium LR too.

    https://my.pgp-hms.org/public_genetic_data

    To save anyone wasting a download, sample hu57D7DD looks to be hg E-P147. But if you just want an idea of data quality go ahead as there is a Y only extract BAM.

    * their drop down list has 'Gencove (eg Nebula Genomics)', not sure who sold the individual test.
    Last edited by MacUalraig; 03-22-2019 at 08:52 AM.
    YSEQ:#37; YFull: YF01405 (Y Elite 2013)
    WGS (Full Genomes Nov 2015, YSEQ Feb 2019, Dante Mar 2019, FGC-10X Linked Reads Apr 2019, Dante-Nanopore May 2019, Chronomics Jan 2020, Sano Genetics Feb 2020, Nebula Genomics June 2020)
    Ancestry GCs: Scots in central Scotland & Ulster, Ireland; English in Yorkshire & Pennines
    Hidden Content
    FBIMatch: A------ (autosomal DNA) for segment matching DO NOT POST ADMIXTURE REPORTS USING MY KIT

  8. #515
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    Can somebody who actually received their BAM data on disk (preferably someone in/shipped-to the USA) let me know which email address at Dante they contacted to make that request before it actually went through? I've sent another request for BAM data for this kit with no response, though they did tell me months ago I would be in line to receive BAM data. Of course, they also said the VCF would be in hg38 and that didn't happen either so I am not particularly confident in receiving BAM data until I have a disk in hand. I have been using the generic contact @ dantelabs.com support email address. I don't know if it is a language barrier or just weak processes on their side but their replies have never inspired confidence, even if the VCF data looks legit.

  9. #516
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    Quote Originally Posted by bjp View Post
    Can somebody who actually received their BAM data on disk (preferably someone in/shipped-to the USA) let me know which email address at Dante they contacted to make that request before it actually went through? I've sent another request for BAM data for this kit with no response, though they did tell me months ago I would be in line to receive BAM data. Of course, they also said the VCF would be in hg38 and that didn't happen either so I am not particularly confident in receiving BAM data until I have a disk in hand. I have been using the generic contact @ dantelabs.com support email address. I don't know if it is a language barrier or just weak processes on their side but their replies have never inspired confidence, even if the VCF data looks legit.
    Did you pay and place an order via

    https://www.dantelabs.com/products/5...-your-raw-data

    Order History
    Order Date Payment Fulfillment Total
    #EU56xxW March 06, 2019 Paid Unfulfilled 59.00 EUR
    #EU18xxW July 17, 2018 Paid Fulfilled 299.00 EUR
    YSEQ:#37; YFull: YF01405 (Y Elite 2013)
    WGS (Full Genomes Nov 2015, YSEQ Feb 2019, Dante Mar 2019, FGC-10X Linked Reads Apr 2019, Dante-Nanopore May 2019, Chronomics Jan 2020, Sano Genetics Feb 2020, Nebula Genomics June 2020)
    Ancestry GCs: Scots in central Scotland & Ulster, Ireland; English in Yorkshire & Pennines
    Hidden Content
    FBIMatch: A------ (autosomal DNA) for segment matching DO NOT POST ADMIXTURE REPORTS USING MY KIT

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  11. #517
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    I ordered the BAM+FASTQ hard disk today. I used WELCOME10 discount code to get 10% lower price.

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  13. #518
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    Israel Israel Jerusalem Star of David
    I've received this email from Dante Labs today:

    "Your DNA Sequencing was completed with success
    Dear Customer,

    We're excited to let you know that we completed the sequencing on your sample.

    We are now preparing the reports and the data for delivery.

    Please do not hesitate to contact me if you need any further assistance.

    Best regards,

    Dante Labs' Team"

    How long should I expect before seeing my report and raw data?
    Check out my Hidden Content

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  15. #519
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    Quote Originally Posted by MacUalraig View Post
    Thank you so much for that URL! No I did not, and no company rep ever directed me to it when previously telling me that I would be in the shipping queue.

    (Edit to add: that link shows an order price in Euros when I visit it not logged in, but redirects me to the base us.dantelabs.com site when I visit it while logged in to my account. The runaround to get a simple answer out of that group is really something.)
    Last edited by bjp; 03-22-2019 at 05:24 PM.

  16. #520
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    Ireland England Netherlands Germany France
    So Dante Labs is making you all pay around 70 Euro for something their rep said would be a free download during the Black Friday sale window? That is quite disappointing.

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