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Thread: South Asian Genotype Project - Razib Khan

  1. #1
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    South Asian Genotype Project - Razib Khan

    Razib Khan, well known for his South Asian genome blogging in the past, has recently started the South Asian Genotype Project to sort of take over Zack's Harappa Project which he has now put aside completely.

    https://www.gnxp.com/WordPress/2017/...otype-project/


    Looks like he is starting from scratch and not sure as of right now how dedicated he will be to it. Here are his spreadsheet results (both group averages + individual participants) for his first calculator:

    https://docs.google.com/spreadsheets...gid=1109543936

    Code:
    If you want to add yourself to the project, follow these rules:
    
    The way it works is simple: send me a 23andMe, Ancestry, or Family Tree DNA raw genotype file to contactgnxp -at- gmail.com (though 23andMe’s new chip has far less overlap with other platforms earlier, so probably best if you were typed before August 2017).
    
    In the subject please put:
    
    “South Asian Genotype Project”
    The state/province your family is from
    Ethnolinguistic group
    If applicable, caste
    In the body of the email you can put Y and mtDNA and any other information you want. Obviously your data is confidential and I won’t identify you by name, just ethnolinguistic group and such
    I haven't sent him my data yet as I feel like waiting until his calculators are more fine tuned. Especially, since the "Punjabi Jatt" sample he has is scoring the following:

    23% Armenian
    35% Belorussian
    1% Dai
    41% NW Indian

    It's not even remotely similar to the other NW South Asian project participants he has so far.

    Last edited by Sapporo; 01-02-2018 at 12:04 PM.

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  3. #2
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    Quote Originally Posted by Sapporo View Post
    Razib Khan, well known for his South Asian genome blogging in the past, has recently started the South Asian Genotype Project to sort of take over Zack's Harappa Project which he has now put aside completely.

    https://www.gnxp.com/WordPress/2017/...otype-project/


    Looks like he is starting from scratch and not sure as of right now how dedicated he will be to it. Here are his spreadsheet results (both group averages + individual participants) for his first calculator:

    https://docs.google.com/spreadsheets...gid=1109543936

    Code:
    If you want to add yourself to the project, follow these rules:
    
    The way it works is simple: send me a 23andMe, Ancestry, or Family Tree DNA raw genotype file to contactgnxp -at- gmail.com (though 23andMe’s new chip has far less overlap with other platforms earlier, so probably best if you were typed before August 2017).
    
    In the subject please put:
    
    “South Asian Genotype Project”
    The state/province your family is from
    Ethnolinguistic group
    If applicable, caste
    In the body of the email you can put Y and mtDNA and any other information you want. Obviously your data is confidential and I won’t identify you by name, just ethnolinguistic group and such
    I haven't sent him my data yet as I feel like waiting until his calculators are more fine tuned. Especially, since the "Punjabi Jatt" sample he has is scoring the following:

    23% Armenian
    35% Belorussian
    1% Dai
    41% NW Indian

    It's not even remotely similar to the other NW South Asian project participants he has so far.

    ive sent him my kit - interested in what he finds

  4. #3
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    I sent him my family data which he ran in the first calculator.

    The Punjabi Jatt results really did stand out as very odd - I think he said himself that he didn't think the components were very robust yet.

    He said he'd have another look at the calculator over the holiday period.

    Will definitely be interesting to see his take on matters.

    Who knows how different it'll all look post the IVC ancient DNA samples..!

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    I'll send him mine today, his selection of components is interesting.
    Deg Teg Fateh - Victory to Charity and Arms

  7. #5
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    Quote Originally Posted by Sapporo View Post
    Razib Khan, well known for his South Asian genome blogging in the past, has recently started the South Asian Genotype Project to sort of take over Zack's Harappa Project which he has now put aside completely.

    https://www.gnxp.com/WordPress/2017/...otype-project/


    Looks like he is starting from scratch and not sure as of right now how dedicated he will be to it. Here are his spreadsheet results (both group averages + individual participants) for his first calculator:

    https://docs.google.com/spreadsheets...gid=1109543936

    Code:
    If you want to add yourself to the project, follow these rules:
    
    The way it works is simple: send me a 23andMe, Ancestry, or Family Tree DNA raw genotype file to contactgnxp -at- gmail.com (though 23andMe’s new chip has far less overlap with other platforms earlier, so probably best if you were typed before August 2017).
    
    In the subject please put:
    
    “South Asian Genotype Project”
    The state/province your family is from
    Ethnolinguistic group
    If applicable, caste
    In the body of the email you can put Y and mtDNA and any other information you want. Obviously your data is confidential and I won’t identify you by name, just ethnolinguistic group and such
    I haven't sent him my data yet as I feel like waiting until his calculators are more fine tuned. Especially, since the "Punjabi Jatt" sample he has is scoring the following:

    23% Armenian
    35% Belorussian
    1% Dai
    41% NW Indian


    It's not even remotely similar to the other NW South Asian project participants he has so far.

    To paraphrase khanabadoshi's quip - as long as it adds up to 100% it's good!

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    I just sent him my data. Thanks!
    Kashmir

  10. #7
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    Quote Originally Posted by noman View Post
    I just sent him my data. Thanks!
    Nice! I might send mine shortly. Still mulling it over.

  11. #8
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    Quote Originally Posted by Sapporo View Post
    Nice! I might send mine shortly. Still mulling it over.
    What are you mulling over lol?

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    Quote Originally Posted by Reza View Post
    What are you mulling over lol?
    Saps mulling over mulled wine or desi daru, one of the 2

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  14. #10
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    Quote Originally Posted by Reza View Post
    What are you mulling over lol?
    Sending over my data when it looks like his calculator still needs a lot of work. 58% combined Belorussian and Armenian for a member of my ethno-linguistic group seems way off.

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