Page 1 of 22 12311 ... LastLast
Results 1 to 10 of 219

Thread: Michal's World K25 calculator

  1. #1
    Registered Users
    Posts
    730
    Sex
    Location
    Krakow
    Ethnicity
    Polish
    Nationality
    Pole
    Y-DNA
    R1a > M458 > Y23110
    mtDNA
    J1c1

    Poland

    Michal's World K25 calculator

    Hi all,

    I've prepared yet another calc for you. This time it is World K25 calc.
    I've created this calc using unsupervised ADMXITURE this time.
    The calc was created based on two datasets: Lazaridis and the recent one for Russian ethnic groups.
    Hopefully this means that the estimates for Uralic, Altaic, Kamchatkan, Siberian, Caucasian, Eskimoic and Northeast-European would be even better than in the calculators not using this new Russian dataset.
    Calc files: https://www.dropbox.com/s/o9vf6ry5ze...25.tar.gz?dl=0

    Note there is this k25.scores containing all the scores/results for the individuals in my merged dataset.

    Details regarding components:
    Nasoic - peaks in Nasoi people. High in Australians.
    Uralic - peaks in Khanty and Mansi people.
    South-Amerindian - peaks in Surui (Paiter) people.
    North-Indian - peaks in Punjabi and Gujarati people.
    Central-African - peaks in Mbuti and Biaka people.
    Altaic - peaks in Tubalar people. Also high in Tuvans.
    Kamchatkan - peaks in Itelmen and Koryak people. High in Chukchis.
    Mediterranean - peaks in Sardinians and Basques.
    Eskimoic - peaks in Eskimo people.
    Siberian - peaks in Ket people. Also high in Nganassans.
    Caucasian - peaks in Abkhaz, Megrel and Georgian people.
    Amazonian - peaks in Karitiana people of South America/Amazon region.
    East-Asian - peaks in Naxi, Korean and Chinese people.
    East-African - peaks in Hadza people.
    Druzian - peaks in Druze people. Also high in Yemenite Jews and Palestinians.
    North-Amerindian - peaks in Pima and Mixe people.
    Arabic - peaks in Bedouins and Saudis.
    Berberic - peaks in Mozabite and Saharawi people.
    Papuan - peaks in Papuans.
    Northeast-European - peaks in Lithuanians, Estonians, Belarusians and Karel people.
    Khomani-San - peaks in Khomani and Ju_hoan people.
    Taiwanese-Aborigenal - peaks in Atayal and Ami people of Taiwan.
    Kalash - peaks in Kalash people.
    Northeast-Asian - peaks in Yakuts and Dolgans.
    West-African - peaks in Yoruba, Esan and Mandenka people.

    My results:
    0.00% Nasoic
    2.77% Uralic
    1.22% South-Amerindian
    2.05% North-Indian
    0.21% Central-African
    1.92% Altaic
    0.12% Kamchatkan
    17.49% Mediterranean
    0.57% Eskimoic
    0.76% Siberian
    7.46% Caucasian
    0.03% Amazonian
    0.00% East-Asian
    0.11% East-African
    6.78% Druzian
    0.72% North-Amerindian
    2.81% Arabic
    1.66% Berberic
    0.06% Papuan
    51.79% Northeast-European
    0.10% Khomani-San
    0.00% Taiwanese-Aborigenal
    1.38% Kalash
    0.00% Northeast-Asian
    0.00% West-African

    I hope this is finally not only fun but also useful and at least a decent quality calculator


    A spreadsheet has been created by Volat where you can enter your results. We can do PCA based on this:

    GOOGLE DOC SPREADSHEET LINK
    Last edited by khanabadoshi; 02-06-2018 at 03:49 AM. Reason: OP Request: edited to include spreadsheet link for visibiliy.

  2. The Following 25 Users Say Thank You to michal3141 For This Useful Post:

     Просигој (02-04-2018),  Abd.H (07-21-2018),  Aldric (02-05-2018),  Arlus (02-07-2018),  Aspar (05-17-2018),  Canarioguanche (07-22-2018),  cercle (02-04-2018),  Exosuits (02-06-2018),  Hayden (02-07-2018),  jellybee (07-21-2018),  jortita (02-05-2018),  kingjohn (02-04-2018),  Lupus82 (02-04-2018),  Modernancientdna (02-05-2018),  MonkeyDLuffy (02-04-2018),  Nibelung (02-05-2018),  Onur Dincer (03-17-2019),  poi (02-06-2018),  RealmOfGenghis (05-17-2018),  sammygene (02-07-2018),  Sea Warrior (02-05-2018),  sktibo (05-17-2018),  StarDS9 (05-17-2018),  Tomenable (02-07-2018),  Vestri (02-04-2018)

  3. #2
    Banned
    Posts
    6,337
    Sex
    Location
    Torun
    Ethnicity
    Central 75% + 25% Mazovia
    Nationality
    Pole
    Y-DNA
    R1a > M198 > YP 1337

    Poland
    Lazaridis dataset only?

  4. The Following User Says Thank You to lukaszM For This Useful Post:

     Oleg (Rus) (02-04-2018)

  5. #3
    Gold Member Class
    Posts
    2,809
    Sex
    Location
    Calne,England
    Ethnicity
    British and Irish
    Nationality
    Great Britain
    Y-DNA
    E-Y45878
    mtDNA
    H67

    United Kingdom Scotland England Ireland
    I'm not sure about the lack of a NW European component, but could someone do mine for me please.
    Please support Mental health research and world community grid

    Hidden Content
    Hidden Content
    Hidden Content
    Hidden Content

  6. The Following User Says Thank You to firemonkey For This Useful Post:

     michal3141 (02-04-2018)

  7. #4
    Registered Users
    Posts
    730
    Sex
    Location
    Krakow
    Ethnicity
    Polish
    Nationality
    Pole
    Y-DNA
    R1a > M458 > Y23110
    mtDNA
    J1c1

    Poland
    Quote Originally Posted by lukaszM View Post
    Lazaridis dataset only?
    Nope. Read carefully. I've merged Lazaridis with this recent Russian dataset. Maybe this can add some interesting flavor to this calc.

  8. The Following User Says Thank You to michal3141 For This Useful Post:

     Tomenable (02-07-2018)

  9. #5
    Banned
    Posts
    6,337
    Sex
    Location
    Torun
    Ethnicity
    Central 75% + 25% Mazovia
    Nationality
    Pole
    Y-DNA
    R1a > M198 > YP 1337

    Poland
    Quote Originally Posted by michal3141 View Post
    Hi all,

    Hopefully this means that the estimates for Uralic, Altaic, Kamchatkan, Siberian, Caucasian, Eskimoic and Northeast-European would be even better than in the calculators not using this new Russian dataset.
    Inuits in Lazaridis have decent amount of Euro admixture. Not all but you must check them one by one.

  10. The Following 2 Users Say Thank You to lukaszM For This Useful Post:

     michal3141 (02-04-2018),  Tomenable (02-07-2018)

  11. #6
    Registered Users
    Posts
    730
    Sex
    Location
    Krakow
    Ethnicity
    Polish
    Nationality
    Pole
    Y-DNA
    R1a > M458 > Y23110
    mtDNA
    J1c1

    Poland
    Quote Originally Posted by firemonkey View Post
    I'm not sure about the lack of a NW European component, but could someone do mine for me please.
    firemonkey, The lack of NW European is because it simply does not show as a separate component when running the unsupervised ADMIXTURE.

    NW European is modeled by ADMIXTURE as a mix of Northeast-European and Mediterranean. This can be seen in your results.

    Your results:

    0.00% Nasoic
    3.35% Uralic
    0.58% South-Amerindian
    4.05% North-Indian
    0.00% Central-African
    0.33% Altaic
    0.00% Kamchatkan
    31.07% Mediterranean
    0.66% Eskimoic
    0.00% Siberian
    7.02% Caucasian
    0.46% Amazonian
    0.00% East-Asian
    0.93% East-African
    3.21% Druzian
    0.98% North-Amerindian
    1.90% Arabic
    1.04% Berberic
    0.37% Papuan
    41.70% Northeast-European
    0.00% Khomani-San
    0.47% Taiwanese-Aborigenal
    1.88% Kalash
    0.00% Northeast-Asian
    0.00% West-African

    EDIT:

    In fact Northeast-European peaks in Lithuanians and Estonians but this is a common component for Northern Europeans (both Western and Eastern Northern Europeans).
    Last edited by michal3141; 02-04-2018 at 07:48 PM. Reason: Adding more info

  12. The Following 6 Users Say Thank You to michal3141 For This Useful Post:

     firemonkey (02-04-2018),  jortita (02-05-2018),  kingjohn (02-04-2018),  Modernancientdna (02-05-2018),  Nibelung (02-05-2018),  Sea Warrior (02-05-2018)

  13. #7
    Banned
    Posts
    6,337
    Sex
    Location
    Torun
    Ethnicity
    Central 75% + 25% Mazovia
    Nationality
    Pole
    Y-DNA
    R1a > M198 > YP 1337

    Poland
    Academic Latvian sample


    0.986323 genotype rate


    0.67% Nasoic
    2.57% Uralic
    0.23% South-Amerindian
    1.25% North-Indian
    0.85% Central-African
    1.83% Altaic
    0.00% Kamchatkan
    18.98% Mediterranean
    1.43% Eskimoic
    0.03% Siberian
    4.70% Caucasian
    0.22% Amazonian
    0.00% East-Asian
    0.00% East-African
    2.09% Druzian
    0.84% North-Amerindian
    0.41% Arabic
    0.07% Berberic
    0.30% Papuan
    60.91% Northeast-European
    0.00% Khomani-San
    0.05% Taiwanese-Aborigenal
    2.54% Kalash
    0.01% Northeast-Asian
    0.02% West-African

  14. The Following 6 Users Say Thank You to lukaszM For This Useful Post:

     jortita (02-05-2018),  kingjohn (02-04-2018),  michal3141 (02-04-2018),  Modernancientdna (02-05-2018),  Nibelung (02-05-2018),  Sea Warrior (02-05-2018)

  15. #8
    Registered Users
    Posts
    128
    Sex
    Omitted
    Ethnicity
    Serbe/Flamand
    Nationality
    Française
    Y-DNA
    I1 Z140+ Y5497+
    mtDNA
    K1a13a1

    France Flanders Serbia Croatia
    Mom
    1.06% Nasoic
    3.48% Uralic
    0.02% South-Amerindian
    0.03% North-Indian
    0.00% Central-African
    2.53% Altaic
    0.00% Kamchatkan
    23.99% Mediterranean
    0.01% Eskimoic
    0.00% Siberian
    12.27% Caucasian
    0.55% Amazonian
    0.04% East-Asian
    0.00% East-African
    11.37% Druzian
    0.00% North-Amerindian
    2.35% Arabic
    2.69% Berberic
    0.00% Papuan
    35.86% Northeast-European
    0.00% Khomani-San
    0.71% Taiwanese-Aborigenal
    3.05% Kalash
    0.00% Northeast-Asian
    0.00% West-African


    Dad
    0.68% Nasoic
    4.08% Uralic
    0.13% South-Amerindian
    5.16% North-Indian
    0.00% Central-African
    0.00% Altaic
    0.00% Kamchatkan
    32.64% Mediterranean
    0.00% Eskimoic
    0.00% Siberian
    6.52% Caucasian
    1.27% Amazonian
    0.00% East-Asian
    0.08% East-African
    4.72% Druzian
    0.00% North-Amerindian
    0.99% Arabic
    2.36% Berberic
    0.32% Papuan
    40.86% Northeast-European
    0.00% Khomani-San
    0.00% Taiwanese-Aborigenal
    0.11% Kalash
    0.00% Northeast-Asian
    0.10% West-African

    Me
    0.90% Nasoic
    4.79% Uralic
    0.03% South-Amerindian
    1.84% North-Indian
    0.00% Central-African
    1.37% Altaic
    0.00% Kamchatkan
    27.42% Mediterranean
    0.00% Eskimoic
    0.00% Siberian
    10.60% Caucasian
    0.89% Amazonian
    0.00% East-Asian
    0.00% East-African
    8.87% Druzian
    0.00% North-Amerindian
    2.45% Arabic
    2.11% Berberic
    0.01% Papuan
    36.90% Northeast-European
    0.00% Khomani-San
    0.00% Taiwanese-Aborigenal
    1.84% Kalash
    0.00% Northeast-Asian
    0.00% West-African

  16. The Following 7 Users Say Thank You to cercle For This Useful Post:

     Aldric (02-05-2018),  Camulogène Rix (02-04-2018),  jortita (02-05-2018),  kingjohn (02-04-2018),  Lupus82 (02-04-2018),  michal3141 (02-04-2018),  Modernancientdna (02-05-2018)

  17. #9
    Registered Users
    Posts
    250
    Y-DNA
    G2a-L30
    mtDNA
    N1b1

    Kurdistan
    Looks accurate for me.


    1.23% Nasoic
    0.00% Uralic
    1.30% South-Amerindian
    12.14% North-Indian
    0.62% Central-African
    0.92% Altaic
    1.87% Kamchatkan
    9.83% Mediterranean
    0.05% Eskimoic
    0.00% Siberian
    31.11% Caucasian
    0.05% Amazonian
    0.00% East-Asian
    0.00% East-African
    20.58% Druzian
    0.00% North-Amerindian
    9.83% Arabic
    1.01% Berberic
    0.25% Papuan
    7.48% Northeast-European
    0.00% Khomani-San
    0.00% Taiwanese-Aborigenal
    1.68% Kalash
    0.00% Northeast-Asian
    0.04% West-African

  18. The Following 7 Users Say Thank You to Lupus82 For This Useful Post:

     Aldric (02-05-2018),  cercle (02-04-2018),  Exosuits (02-06-2018),  jortita (02-05-2018),  kingjohn (02-04-2018),  michal3141 (02-04-2018),  Modernancientdna (02-05-2018)

  19. #10
    Registered Users
    Posts
    730
    Sex
    Location
    Krakow
    Ethnicity
    Polish
    Nationality
    Pole
    Y-DNA
    R1a > M458 > Y23110
    mtDNA
    J1c1

    Poland
    kingjohn (components above 5% are in bold font):

    0.00% Nasoic
    1.40% Uralic
    0.17% South-Amerindian
    2.98% North-Indian
    0.08% Central-African
    0.43% Altaic
    0.00% Kamchatkan
    23.37% Mediterranean
    0.03% Eskimoic
    0.20% Siberian
    19.48% Caucasian
    0.00% Amazonian
    0.00% East-Asian
    0.00% East-African
    17.95% Druzian
    0.38% North-Amerindian
    9.89% Arabic
    6.22% Berberic
    0.46% Papuan
    15.76% Northeast-European
    0.00% Khomani-San
    0.00% Taiwanese-Aborigenal
    0.44% Kalash
    0.77% Northeast-Asian
    0.00% West-African

  20. The Following 5 Users Say Thank You to michal3141 For This Useful Post:

     Aldric (02-05-2018),  Exosuits (02-06-2018),  jortita (02-05-2018),  kingjohn (02-04-2018),  Modernancientdna (02-05-2018)

Page 1 of 22 12311 ... LastLast

Similar Threads

  1. New K30 / K47 World Calculator
    By lukaszM in forum Autosomal (auDNA)
    Replies: 2774
    Last Post: 04-11-2019, 05:11 PM
  2. K15 World - new DIY calculator
    By lukaszM in forum Autosomal (auDNA)
    Replies: 264
    Last Post: 03-15-2019, 08:26 PM
  3. K30 World calculator
    By Arnaud Bzh in forum French
    Replies: 5
    Last Post: 08-01-2018, 03:32 PM
  4. Michal's Eurasian K5 calculator
    By michal3141 in forum Autosomal (auDNA)
    Replies: 142
    Last Post: 05-17-2018, 03:06 AM
  5. My first own ADMIXTURE calculator - K4 World test:)
    By lukaszM in forum Autosomal (auDNA)
    Replies: 35
    Last Post: 11-26-2017, 01:10 AM

Posting Permissions

  • You may not post new threads
  • You may not post replies
  • You may not post attachments
  • You may not edit your posts
  •