Roman Soldier FN2 buried in Germany in Veeramah et al. 2018 didn't have the Y-DNA SNPs listed in the study, as far as I could tell, so I went ahead and downloaded the BAM file from here then I ran it through the BAM Analysis Kit. If the results are correct, which they seem to be since the results don't seem illogical, then he is positive for G-L43 and everything directly upstream and negative for everything downstream from G-L43 that he was tested for that was in the Ybrowse snps_hg19.csv file from 2017-12-17 that I compared the positions to.
Here are some of what was reported. The full SNP results are attached in a spreadsheet here. Are there any G-L43 experts that can take a look and determine which subclades weren't tested or were tested but don't have a name in the spreadsheet? The filters can be changed to show tested positions without a longhand name or associated shorthand SNP.
Code:
hg19 position genotype SNP and synonyms Result Ancestral Derived 2017 Longhand Haplogroup 13646167 T Z735 + C T G2a2b2a1a1b1 17234236 G S19395/Z6380 + T G G2a2b2a1a1b1 17234258 T CTS7012 + A T G2a2b2a1a1b1 22784020 C Z1900 + T C G2a2b2a1a1b1 2816687 C Z3035 + T C G2a2b2a1a1b1 6979140 G CTS730 + C G G2a2b2a1a1b1 8341813 G Z729 + T G G2a2b2a1a1b1 14748116 A Z741/CTS3226 + C A G2a2b2a1a1b1a 16009691 C Z745/CTS5089 + T C G2a2b2a1a1b1a 16471001 G Z1819/CTS5762 + C G G2a2b2a1a1b1a 16837337 G Z1817 + C G G2a2b2a1a1b1a 18156635 A Z752/CTS8701 + C A G2a2b2a1a1b1a 21304697 C Z6900 + A C G2a2b2a1a1b1a 7550025 G Z727 + A G G2a2b2a1a1b1a 7844120 G Z3195 + C G G2a2b2a1a1b1a 14370143 T Z30640 + C T G2a2b2a1a1b1a1 17937365 G L43/S147 + A G G2a2b2a1a1b1a1 23631793 G Y10621/Z30642 - G A G2a2b2a1a1b1a1a 9848214 T Y11074/Z30641 - T C G2a2b2a1a1b1a1a 17353144 C YSC0000033 - C T G2a2b2a1a1b1a1a1a1b 15474070 T Z17783 - T C G2a2b2a1a1b1a1a1c 9816131 A Z17780 - A T G2a2b2a1a1b1a1a1c 6755279 G S2786/AMM490.1 - G T G2a2b2a1a1b1a1a2a1c1a 23592051 G F3484.2 - G A G2a2b2a1a1b1a1a2a2a 17437224 A CTS7357 - A G G2a2b2a1a1b1a1a3 14871922 T Z16771/Y14681 - T C G2a2b2a1a1b1a1b2b1 16351365 A Y14326/Z16773 - A G G2a2b2a1a1b1a1b2b1 17106280 G Z17394/Y14683 - G A G2a2b2a1a1b1a1b2b1 7690970 T Z16770 - T C G2a2b2a1a1b1a1b2b1 23559310 C M10375 - C G G2a2b2a1a1b1a1b2b1a2 16201203 A M4977 - A G G2a2b2a1a1b1a1b2b1d~ 16571728 C M10506 - C T G2a2b2a1a1b1a1b2b1e~ 17111777 T Z726/CTS6796 - T C G2a2b2a1a1b1a2 15833180 G CTS4803 - G A G2a2b2a1a1b1a2a 19431505 C CTS10391 - C G G2a2b2a1a1b1a2a1a 21690692 A S23438 - A G G2a2b2a1a1b1a2a1a 16767022 G S18765 - G T G2a2b2a1a1b1a2a1a2 6964003 C CTS702 - C T G2a2b2a1a1b1a2a1a5~ 7037735 G CTS826 - G C G2a2b2a1a1b1a2a1a5~ 16407298 G S2796 - G A G2a2b2a1a1b1a2a1d~ 17237855 C S2798 - C T G2a2b2a1a1b1a2a1d~ 2883881 G S2784 - G A G2a2b2a1a1b1a2a1d~ 7216816 G S2788 - G A G2a2b2a1a1b1a2a1d2~ 17533255 G M2226/CTS7551/L667 - G A G2a2b2a1a1b1a2a6~ 14097558 G F1694 - G A G2a2b2a1a1b1a2a7~ 2735219 G F720 - G A G2a2b2a1a1b1a2a8~ 17341707 C Z16775 - C A G2a2b2a1a1b1a2b 13936849 G Z6383 - G T G2a2b2a1a1b1a2c~ 15261567 T Z6385 - T A G2a2b2a1a1b1a2c~ 16970203 T Z6386 - T G G2a2b2a1a1b1a2c~ 18198733 T Z6031 - T C G2a2b2a1a1b1a2c~ 6885921 C Z6152 - C T G2a2b2a1a1b1a2c~ 7017280 C Z6151 - C T G2a2b2a1a1b1a2c~ 15897972 C Z6750/FGC499 - C T G2a2b2a1a1b1a3 15097650 C CTS3664 - C T G2a2b2a1a1b1a6~ 6973218 C CTS718 - C T G2a2b2a1a1b1a6~ 15034018 G S16691 - G T G2a2b2a1a1b1b 22753244 G S24652 - G A G2a2b2a1a1b1b 7653602 G S10458 - G A G2a2b2a1a1b1b
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Originally Posted by ArmandoR1b
