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Thread: España y Portugal en modelos simples

  1. #101
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    Hola todos, aquí un nuevo estudio que incluye nuevas muestras españolas de Granada y Huelva, el sur de Portugal y también 3 grupos Bereberes de Marruecos.
    the file are genotyped, se pueden incluir en G25.

    https://academic.oup.com/mbe/advance...msz288/5670533

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  3. #102
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    Ya he mandado PM a Davidski, lo más interesante para mi son las muestras del Sur de Portugal que aún no tenemos
    YDNA E-Y31991>PF4428>Y134097>Y134104>Y168273>FT17866 (TMRCA ~1000AD) - Domingos Rodrigues, b. circa 1690 Hidden Content , Viana do Castelo, Portugal - Stonemason, miller.
    mtDNA H20 - Monica Vieira, b. circa 1700 Hidden Content , Porto, Portugal

    Hidden Content
    Global25 PCA West Eurasia dataset Hidden Content

    [1] "distance%=1.5077"

    Ruderico

    Iberia_IA,41.2
    Gaul_Velaux_IA,39.8
    Berber_EMA,11.6
    Roman_Colonial,7.4

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  5. #103
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    Quote Originally Posted by Amhas View Post
    Hola todos, aquí un nuevo estudio que incluye nuevas muestras españolas de Granada y Huelva, el sur de Portugal y también 3 grupos Bereberes de Marruecos.
    the file are genotyped, se pueden incluir en G25.

    https://academic.oup.com/mbe/advance...msz288/5670533
    Thanks!!!
    Do you have a question or topic about genetics in Spain and/or prefer to use Spanish language? Visit the new subforum!

    Hidden Content

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  7. #104
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    Quote Originally Posted by Amhas View Post
    Hola todos, aquí un nuevo estudio que incluye nuevas muestras españolas de Granada y Huelva, el sur de Portugal y también 3 grupos Bereberes de Marruecos.
    the file are genotyped, se pueden incluir en G25.

    https://academic.oup.com/mbe/advance...msz288/5670533
    Estoy particularmente interesado en las muestras del sur de Portugal.

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  9. #105
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    Quote Originally Posted by Endovelicus View Post
    Estoy particularmente interesado en las muestras del sur de Portugal.
    Assim a olhometro parecem ser idênticas às Portuguesas actuais do G25.
    Os Galegos são os novos do G25, repara nos resultados (se não estou em erro usaram amostras do Norte de Marrocos):



    Com o modelo da Idade do Ferro, usando amostras Guanches (idênticos aos Marroquinos do Norte):
    [1] "distance%=0.7629"

    Spanish_Galicia

    Iberia_IA,66.4
    Guanche,10
    Germanic_IA,9.8
    ITA_Rome_Imperial,8
    Levant_Roman,5.8


    [1] "distance%=0.9177"

    Portuguese

    Iberia_IA,63.8
    Guanche,11.2
    Germanic_IA,11
    ITA_Rome_Imperial,8.8
    Levant_Roman,5.2



    Não parece haver diferença entre estes Portugueses do Sul e os disponíveis no G25. As referências deles para o Near East já não são iguais às minhas, mas o resultado virtualmente igual do Norte de África parece ser um sinal positivo para o modelo (e para o G25 no geral)
    YDNA E-Y31991>PF4428>Y134097>Y134104>Y168273>FT17866 (TMRCA ~1000AD) - Domingos Rodrigues, b. circa 1690 Hidden Content , Viana do Castelo, Portugal - Stonemason, miller.
    mtDNA H20 - Monica Vieira, b. circa 1700 Hidden Content , Porto, Portugal

    Hidden Content
    Global25 PCA West Eurasia dataset Hidden Content

    [1] "distance%=1.5077"

    Ruderico

    Iberia_IA,41.2
    Gaul_Velaux_IA,39.8
    Berber_EMA,11.6
    Roman_Colonial,7.4

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  11. #106
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    Quote Originally Posted by Ruderico View Post
    Ya he mandado PM a Davidski, lo más interesante para mi son las muestras del Sur de Portugal que aún no tenemos
    In the study they mention another study about Canarians "Genomic Analyses of Human European Diversity at the Southwestern Edge: Isolation, African Influence and Disease Associations in the Canary Islands" from 2018:

    https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6278859

    with data from "416 individuals (34 from El Hierro, 35 from La Palma, 78 from La Gomera, 64 from Tenerife, 117 from Gran Canaria, 32 from Fuerteventura, and 56 from Lanzarote)" !

    I asked David also if he could include them into G25
    Last edited by E_M81_I3A; 12-11-2019 at 08:30 PM.
    G25 Davidski's Ancient scaled (Distance: 2.6158% R5P):
    50.6 Anatolia_Barcin_N
    26.6 Yamnaya_RUS_Samara
    11.9 MAR_Taforalt
    5.8 WHG
    5.1 Yoruba


    Eurogenes Basal-Rich K7:
    Basal-rich 43.73
    Villabruna-related 42.73
    Ancient_North_Eurasian 7.74
    Sub-Saharan 4.67
    East_Eurasian 1.02


    G25 scaled:Hidden Content Hidden Content
    Commercial:Hidden Content Hidden Content Hidden Content


    "L'homme ne saurait avoir de plus noble occupation que de parcourir et de décrire l'astre qu'il habite" (T.Gautier)

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  13. #107
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    David have put the 416 Canarians here:

    https://drive.google.com/open?id=17u...RqDPkOOFx3LCwt
    G25 Davidski's Ancient scaled (Distance: 2.6158% R5P):
    50.6 Anatolia_Barcin_N
    26.6 Yamnaya_RUS_Samara
    11.9 MAR_Taforalt
    5.8 WHG
    5.1 Yoruba


    Eurogenes Basal-Rich K7:
    Basal-rich 43.73
    Villabruna-related 42.73
    Ancient_North_Eurasian 7.74
    Sub-Saharan 4.67
    East_Eurasian 1.02


    G25 scaled:Hidden Content Hidden Content
    Commercial:Hidden Content Hidden Content Hidden Content


    "L'homme ne saurait avoir de plus noble occupation que de parcourir et de décrire l'astre qu'il habite" (T.Gautier)

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  15. #108
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    Quote Originally Posted by Amhas View Post
    Hola todos, aquí un nuevo estudio que incluye nuevas muestras españolas de Granada y Huelva, el sur de Portugal y también 3 grupos Bereberes de Marruecos.
    the file are genotyped, se pueden incluir en G25.

    https://academic.oup.com/mbe/advance...msz288/5670533
    Is there a link to the genotype data anywhere? David is asking for it
    YDNA E-Y31991>PF4428>Y134097>Y134104>Y168273>FT17866 (TMRCA ~1000AD) - Domingos Rodrigues, b. circa 1690 Hidden Content , Viana do Castelo, Portugal - Stonemason, miller.
    mtDNA H20 - Monica Vieira, b. circa 1700 Hidden Content , Porto, Portugal

    Hidden Content
    Global25 PCA West Eurasia dataset Hidden Content

    [1] "distance%=1.5077"

    Ruderico

    Iberia_IA,41.2
    Gaul_Velaux_IA,39.8
    Berber_EMA,11.6
    Roman_Colonial,7.4

  16. #109
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    Quote Originally Posted by Ruderico View Post
    Is there a link to the genotype data anywhere? David is asking for it
    https://www.ebi.ac.uk/ega/studies/EGAS00001003901


    The data can only be used by someone who got access, I don't know if David could do it.




    Quote Originally Posted by E_M81_I3A View Post
    David have put the 416 Canarians here:

    https://drive.google.com/open?id=17u...RqDPkOOFx3LCwt

    Some individuals can reach 35% North African, but again part of it is Iberian derived.
    Last edited by Amhas; 12-12-2019 at 11:07 AM.

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  18. #110
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    Thanks a lot, I'll send him the link. Lets hope he can access the files
    YDNA E-Y31991>PF4428>Y134097>Y134104>Y168273>FT17866 (TMRCA ~1000AD) - Domingos Rodrigues, b. circa 1690 Hidden Content , Viana do Castelo, Portugal - Stonemason, miller.
    mtDNA H20 - Monica Vieira, b. circa 1700 Hidden Content , Porto, Portugal

    Hidden Content
    Global25 PCA West Eurasia dataset Hidden Content

    [1] "distance%=1.5077"

    Ruderico

    Iberia_IA,41.2
    Gaul_Velaux_IA,39.8
    Berber_EMA,11.6
    Roman_Colonial,7.4

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