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Thread: Corded Ware, Beakers and Minoan G25 Calculator

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  1. #1
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    Corded Ware, Beakers and Minoan G25 Calculator

    I've created a simple K5 calculator based on G25 Scaled coordinates.
    The main goal of this calculator is to estimate ancestry proportions from major cultures in Europe 4000-5000 years ago: Bell Beakers (represented by Beaker_Iberia), Corded Ware (represented by CWC_Baltic) and Minoans (represented by Minoan_Lasithi)
    Additionally I've added two non-European populations: Nganassans (proxy for Siberian and East Asian ancestry) and Yoruba (proxy for SubSaharan ancestry).
    Note that this is a calculator for Europeans only and I suggest using it with default penalty.

    Datasheet:

    Code:
    ,PC1,PC2,PC3,PC4,PC5,PC6,PC7,PC8,PC9,PC10,PC11,PC12,PC13,PC14,PC15,PC16,PC17,PC18,PC19,PC20,PC21,PC22,PC23,PC24,PC25
    Beaker_Iberia,0.127027,0.14583,0.059887,0.013889,0.05995,-0.001227,-0.007191,0.002631,0.034565,0.043882,-0.003865,0.012259,-0.023994,-0.017396,0.007709,0.000583,0.00412,0.003269,2.5e-05,4e-04,0.008086,0.005119,-0.00599,-0.017834,0.001126
    CWC_Baltic,0.125205,0.114417,0.071024,0.093455,0.031596,0.028819,0.009322,0.008077,-0.006408,-0.027275,0.002869,-0.005545,0.006095,-0.000183,0.015834,0.010475,0.002912,0.000549,0.00352,0.00371,0.005158,0.002638,-0.002177,-0.004298,2e-04
    Minoan_Lasithi,0.119287,0.170609,-0.018177,-0.093993,0.029544,-0.039826,-0.001316,-0.003461,0.010349,0.05981,0.002988,0.015316,-0.025124,-5.5e-05,-0.037459,-0.010952,0.017393,-0.001242,0.008874,-0.013632,-0.013376,0.008384,-0.005078,-0.00106,-0.002443
    Nganassan,0.047692,-0.406618,0.155789,0.00239,-0.159445,-0.088213,0.028507,0.043337,0.031088,0.012848,0.102857,0.009412,-0.004073,-0.026162,-0.021973,-0.012331,-0.001095,0.013416,0.026837,-0.00085,0.043136,-0.011895,0.03361,0.000398,0.013556
    Yoruba,-0.630062,0.062501,0.022113,0.016708,0.000503,0.012474,-0.044417,0.047767,-0.048881,0.032769,0.004621,0.00079,0.023056,0.000951,0.012523,-0.009607,0.007076,0.000449,0.006022,-0.00299,0.001554,0.002316,-0.001759,-0.000471,-0.000425
    My results:

    [1] "distance%=4.3583"

    michal3141

    CWC_Baltic,82.8
    Beaker_Iberia,9.4
    Minoan_Lasithi,7.2
    Nganassan,0.6

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  3. #2
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    [1] "distance%=3.9604"

    Sorcelow_scaled

    Minoan_Lasithi,55.4
    CWC_Baltic,43.4
    Nganassan,0.6
    Yoruba,0.6

    But this model makes more sense for me

    [1] "distance%=2.8027"

    Sorcelow_scaled

    Minoan_Lasithi,55.2
    Yamnaya_Kalmykia,20.8
    Russian_Tver,10.8
    Russian_Kursk,10.4
    Russian_Smolensk,2.8

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  5. #3
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    Quote Originally Posted by Sorcelow View Post
    But this model makes more sense for me

    [1] "distance%=2.8027"

    Sorcelow_scaled

    Minoan_Lasithi,55.2
    Yamnaya_Kalmykia,20.8
    Russian_Tver,10.8
    Russian_Kursk,10.4
    Russian_Smolensk,2.8
    So, you are from Λακεδαίμων, good! If your ancestors are all from this region of Greece, do you believe that the ancient Spartans looked like you from an autosomal standpoint?
    IMHO they were probably more pulled towards Minoans, but with a strong touch of Yamnaya (the same level as you).
    Eurogenes G25: 47% DEU_Halberstadt_LBA+36% ITL_Proto-Villanovan+17% GRC_Mycenaean

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  7. #4
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    Here are some results:

    Me:

    [1] "distance%=3.1007"

    Beaker_Iberia,50
    CWC_Baltic,37.2
    Minoan_Lasithi,12.4
    Nganassan,0.4

    Dad:

    [1] "distance%=3.6645"

    CWC_Baltic,42.2
    Beaker_Iberia,40
    Minoan_Lasithi,15.8
    Nganassan,2

    Mom:

    [1] "distance%=3.0442"

    Beaker_Iberia,44.2
    CWC_Baltic,44
    Minoan_Lasithi,11.8

    Wife:

    [1] "distance%=3.2938"

    CWC_Baltic,46.8
    Beaker_Iberia,39.8
    Minoan_Lasithi,13.4

    Father in law:

    [1] "distance%=4.829"

    CWC_Baltic,53
    Beaker_Iberia,37.4
    Minoan_Lasithi,8.8
    Yoruba,0.8

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  9. #5
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    Could someone run mine please?

    ,PC1,PC2,PC3,PC4,PC5,PC6,PC7,PC8,PC9,PC10,PC11,PC1 2,PC13,PC14,PC15,PC16,PC17,PC18,PC19,PC20,PC21,PC2 2,PC23,PC24,PC25
    Jackson_Devoni_scaled,0.124067188128046,0.12186353 0229515,0.0497799284852841,0.034561165634278,0.029 5439902518262,0.00948228242566103,0.00517023403725 595,0.00207683653665858,0,-0.000911180552909247,0.00308538004142115,-0.00164853268090141,-0.00713571299871288,-0.00302769879611562,0.00773605713525954,0.00570135 247112472,-0.00625843430899454,0.00557429816210077,-0.000754188305398592,-0.00287637966895888,0.00237081631511174,0.00284401 300981553,-0.000246495436063226,0.00602494813255683,0.0040714 9112733897

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  11. #6
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    Quote Originally Posted by J Man View Post
    Could someone run mine please?

    ,PC1,PC2,PC3,PC4,PC5,PC6,PC7,PC8,PC9,PC10,PC11,PC1 2,PC13,PC14,PC15,PC16,PC17,PC18,PC19,PC20,PC21,PC2 2,PC23,PC24,PC25
    Jackson_Devoni_scaled,0.124067188128046,0.12186353 0229515,0.0497799284852841,0.034561165634278,0.029 5439902518262,0.00948228242566103,0.00517023403725 595,0.00207683653665858,0,-0.000911180552909247,0.00308538004142115,-0.00164853268090141,-0.00713571299871288,-0.00302769879611562,0.00773605713525954,0.00570135 247112472,-0.00625843430899454,0.00557429816210077,-0.000754188305398592,-0.00287637966895888,0.00237081631511174,0.00284401 300981553,-0.000246495436063226,0.00602494813255683,0.0040714 9112733897
    "distance%=2.4138"

    Jackson_Devoni_scaled

    CWC_Baltic,61.4
    Beaker_Iberia,19.8
    Minoan_Lasithi,17.2
    Nganassan,1.6

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  13. #7
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    Hello Michal,

    This looks interesting! Would you mind running mine, please?

    JMcB_scaled,0.132035,0.140143,0.065996,0.040052,0. 040931,0.015339,0.005875,0.005307,0.009817,0.00984 1,0.000162,0.00015,-0.016204,-0.012661,0.013436,0.003182,-0.006128,0.002534,0.006536,0.002001,0.009608,0.002 72,0.001109,0.006145,-0.000479

    Thanks in advance!
    Paper Trail: 42.25% English, 31.25% Scottish, 12.5% Irish, 6.25% German, 6.25% Italian & 1.5% French. Or: 86% British Isles, 6.25% German, 6.25% Italian & 1.5% French.
    LDNA(c): 86.3% British Isles (48.6% English, 37.7% Scottish & Irish), 7.8% NW Germanic, 5.9% Europe South (Aegean 3.4%, Tuscany 1.3%, Sardinia 1.1%)
    BigY 700: I1-Z140 >I-F2642 >Y1966 >Y3649 >A13241 >Y3647 >A13248 (circa 620 AD) >A13242/YSEQ (circa 765 AD) >FT80854 (circa 1650 AD).

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  15. #8
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    Quote Originally Posted by JMcB View Post
    Hello Michal,

    This looks interesting! Would you mind running mine, please?

    JMcB_scaled,0.132035,0.140143,0.065996,0.040052,0. 040931,0.015339,0.005875,0.005307,0.009817,0.00984 1,0.000162,0.00015,-0.016204,-0.012661,0.013436,0.003182,-0.006128,0.002534,0.006536,0.002001,0.009608,0.002 72,0.001109,0.006145,-0.000479

    Thanks in advance!
    JMcB.PNG
    distance%=4.6465"
    Barcin_N,47.2
    Yamnaya_Samara,41.4
    WHG,10.6
    Ethiopia_4500BP,0.8


    E-V13 => E-PH1246 => E-BY14160
    Antonio Reale born circa 1710, Ciminà (RC) Italy

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  17. #9
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    Quote Originally Posted by digital_noise View Post

    Thank you, digital, I appreciate it!

    Is this on Poi’s Runner already?
    Paper Trail: 42.25% English, 31.25% Scottish, 12.5% Irish, 6.25% German, 6.25% Italian & 1.5% French. Or: 86% British Isles, 6.25% German, 6.25% Italian & 1.5% French.
    LDNA(c): 86.3% British Isles (48.6% English, 37.7% Scottish & Irish), 7.8% NW Germanic, 5.9% Europe South (Aegean 3.4%, Tuscany 1.3%, Sardinia 1.1%)
    BigY 700: I1-Z140 >I-F2642 >Y1966 >Y3649 >A13241 >Y3647 >A13248 (circa 620 AD) >A13242/YSEQ (circa 765 AD) >FT80854 (circa 1650 AD).

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  19. #10
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    Quote Originally Posted by JMcB View Post
    Is this on Poi’s Runner already?
    You can run this calc (or anything else) directly using http://185.144.156.77:3000/freeform_nmonte.html



    I can still add this to the custom calc list later.

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