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Thread: Are there updated G25 modern scaled and unscaled spreadsheets?

  1. #41
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    Quote Originally Posted by Generalissimo View Post
    There will be ancient Danish samples available from the Middle Ages soon. If they're high coverage, they'll be better than using modern samples because they'll be less mixed locally.
    Do you have northern German samples at all, modern and/or ancient? I guess Anglo-Saxons would qualify if they are not mixed with Britons..

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     JMcB (07-08-2019)

  3. #42
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    Calne,England
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    H67

    United Kingdom Scotland England Ireland
    ^ That suggests to my simple mind(about this) that the women brought over from Ireland and Scotland gradually tailed off , and since then Icelanders have interacted more with people from Norway and Sweden .

    Just for fun top 5 check fits for scaled and unscaled.

    Scaled

    1 Icelandic:Average Norwegian_Averaged Averaged 1.439
    4 Icelandic:Average Scottish_Averaged Averaged 1.574
    5 Icelandic:Average Orcadian_Averaged Averaged 1.575
    6 Icelandic:Average Swedish_Averaged Averaged 1.645
    8 Icelandic:Average Irish_Averaged Averaged 1.65

    Unscaled


    1 Icelandic:Average Scottish_Averaged Averaged 0.789
    2 Icelandic:Average Dutch_Averaged Averaged 0.836
    4 Icelandic:Average Orcadian_Averaged Averaged 0.858
    5 Icelandic:Average English_Averaged Averaged 0.88
    6 Icelandic:Average Irish_Averaged Averaged 0.894
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  5. #43
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    Quote Originally Posted by evon View Post
    Do you have northern German samples at all, modern and/or ancient? I guess Anglo-Saxons would qualify if they are not mixed with Britons..
    There are likely to be Northern Germans among the main German sample set. You just have to isolate them somehow.

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     evon (07-09-2019)

  7. #44
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    Greece United States of America
    Dave, thanks for adding so many of those samples from the Damgaard Inner Eurasia paper to the G25. Lots of new North Caucasian samples in particular really expand the dataset quite nicely. I noticed many of the samples listed in the supplement aren't included, though. Not good enough coverage?
    Ελευθερία ή θάνατος.

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  9. #45
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    Quote Originally Posted by firemonkey View Post
    ^ That suggests to my simple mind(about this) that the women brought over from Ireland and Scotland gradually tailed off , and since then Icelanders have interacted more with people from Norway and Sweden .

    Just for fun top 5 check fits for scaled and unscaled.

    Scaled

    1 Icelandic:Average Norwegian_Averaged Averaged 1.439
    4 Icelandic:Average Scottish_Averaged Averaged 1.574
    5 Icelandic:Average Orcadian_Averaged Averaged 1.575
    6 Icelandic:Average Swedish_Averaged Averaged 1.645
    8 Icelandic:Average Irish_Averaged Averaged 1.65

    Unscaled


    1 Icelandic:Average Scottish_Averaged Averaged 0.789
    2 Icelandic:Average Dutch_Averaged Averaged 0.836
    4 Icelandic:Average Orcadian_Averaged Averaged 0.858
    5 Icelandic:Average English_Averaged Averaged 0.88
    6 Icelandic:Average Irish_Averaged Averaged 0.894
    - https://www.nature.com/scitable/defi...etic-drift-201

    Genetic drift describes random fluctuations in the numbers of gene variants in a population. Genetic drift takes place when the occurrence of variant forms of a gene, called alleles, increases and decreases by chance over time. These variations in the presence of alleles are measured as changes in allele frequencies.

    Typically, genetic drift occurs in small populations, where infrequently occurring alleles face a greater chance of being lost. Once it begins, genetic drift will continue until the involved allele is either lost by a population or until it is the only allele present in a population at a particular locus. Both possibilities decrease the genetic diversity of a population. Genetic drift is common after population bottlenecks, which are events that drastically decrease the size of a population. In these cases, genetic drift can result in the loss of rare alleles and decrease the gene pool. Genetic drift can cause a new population to be genetically distinct from its original population, which has led to the hypothesis that genetic drift plays a role in the evolution of new species.

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  11. #46
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    Ancient

    • PEN=0
      [1] "distance%=2.3275"


      TZA_Pemba_600BP,41.8
      EGY_Hellenistic,13.4
      KEN_Pastoral_IA,11.6
      EGY_Late_Period,11.2
      MAR_EN,10.6
      AFG_Darra_i_kur_low_res,3.6
      MAR_LN,3.4
      Levant_Canaanite_MBA,2
      Anatolia_N_Kumtepe_low_res,1.2
      Iberia_Central_CA_Afr,0.4
      Levant_JOR_EBA,0.4
      TZN_PN,0.4
    • PEN=DEF
      [1] "distance%=7.4147"

      TZA_Luxmanda_3100BP,21.4
      KEN_Pastoral_IA,10
      TZN_PN,9.2
      KEN_IA_Deloraine,8.8
      KEN_Pastoral_N,6.2
      TZA_Pemba_600BP,5.4
      ZAF_400BP,5.2
      MAR_EN,2.4
      Canary_Islands_Guanche,2.2
      ETH_4500BP,2
      Iberia_Central_CA_Afr,2
      KEN_400BP,2
      KEN_LSA,2
      MAR_Iberomaurusian,2
      KEN_Pastoral_N_Elmenteitan,0.8
      EGY_Hellenistic,0.6
      England_Roman_Near_Eastern_o,0.6
      Levant_JOR_EBA,0.6
      Levant_LBN_MA_NE,0.6
      MAR_LN,0.6
      Anatolia_Tepecik_Ciftlik_N,0.4
      BGR_IA,0.4
      HUN_Protoboleraz_LCA,0.4
      Iberia_Central_CA,0.4
      Iberia_Northeast_RomP,0.4
      Iberia_Southeast_c.3-4CE,0.4
      Iberia_Southeast_c.5-8CE,0.4
      IRN_Hasanlu_IA,0.4
      POL_BKG_N,0.4
      RUS_Maykop,0.4
      RUS_Ust_Ishim,0.4
      TKM_Parkhai_LBA,0.4
      TKM_Tepe_Anau_En,0.4
      TZN_PN_o,0.4
      AFG_Darra_i_kur_low_res,0.2
      Anatolia_Barcin_N,0.2
      Anatolia_Boncuklu_N,0.2
      Anatolia_Isparta_EBA,0.2
      Anatolia_Kaman-Kalehoyuk_MLBA_low_res,0.2
      Anatolia_N_Kumtepe_low_res,0.2
      ARM_Lchashen_MBA,0.2
      AUT_LBK_N,0.2
      Bell_Beaker_HUN_EBA,0.2
      Bell_Beaker_ITA,0.2
      BGR_EBA,0.2
      BGR_Krepost_N,0.2
      BGR_Late_C,0.2
      Corded_Ware_CZE_o,0.2
      England_CA_EBA,0.2
      GRC_N,0.2
      HRV_Early_IA,0.2
      HRV_Impressa_N,0.2
      HRV_Sopot_MN,0.2
      HUN_LBK_MN,0.2
      HUN_LCA,0.2
      HUN_Tisza_LN,0.2
      IRN_Ganj_Dareh_Historic,0.2
      IRN_Seh_Gabi_C,0.2
      IRN_Seh_Gabi_LN,0.2
      IRN_Tepe_Abdul_Hosein_N,0.2
      KAZ_Oy_Dzhaylau_MLBA_o2,0.2
      KEN_Pastoral_N_o,0.2
      LAO_Hoabinhian,0.2
      Levant_Canaanite_MBA,0.2
      Levant_Natufian,0.2
      Levant_PPNB,0.2
      Levant_PPNC,0.2
      Malaysia_LN,0.2
      MKD_N,0.2
      Mongolia_XiongNu_WE,0.2
      MWI_Chencherere_5200BP,0.2
      PAK_Swat_Aligrama_IA,0.2
      PAK_Swat_Loebanr_IA,0.2
      RUS_Altai_IA,0.2
      RUS_Maykop_Late,0.2
      RUS_Maykop_Novosvobodnaya,0.2
      RUS_Steppe_Maykop_o,0.2
      RUS_Sunghir_MA,0.2
      Scotland_N,0.2
      TKM_Namazga_Tepe_En,0.2
      UZB_Sappali_Tepe_BA,0.2
      UZB_Sappali_Tepe_BA_o,0.2
      VUT_2500BP,0.2


    Modern
    • PEN=0
      [1] "distance%=1.5617"

      Gambian,19.2
      Berber_MAR_TIZ,18.6
      Saudi,15.2
      Dinka,14.4
      Berber_Algeria,8.2
      Yoruba,5.8
      Luhya_Kenya,5
      Georgian_Imer,3.8
      Ethiopian_Jew,3.2
      Egyptian,2.8
      Saharawi,1.6
      Yemenite_Ma'rib,1
      Papuan,0.6
      Ethiopian_Afar,0.4
      Palestinian,0.2
    • PEN=DEF
      [1] "distance%=2.244"

      Berber_Algeria,58.4
      Ethiopian_Afar,2.2
      Somali,2.2
      Ethiopian_Amhara,1.8
      Ethiopian_Jew,1.8
      Ethiopian_Oromo,1.8
      Ethiopian_Wolayta,1.8
      Gambian,1.8
      Kikuyu,1.6
      Yoruba,1.6
      Luo,1.4
      Ethiopian_Tigray,1.2
      Igbo,1.2
      Luhya_Kenya,1.2
      Mandenka,1.2
      Masai,1.2
      Bantu_Kenya,1
      Datog,1
      Dinka,1
      Eritrean,0.8
      Mende_Sierra_Leone,0.8
      Sudanese,0.8
      Egyptian,0.6
      Iranian_Zoroastrian,0.6
      Kongo,0.6
      Yemenite_Mahra,0.6
      Berber_Tunisia_Sen,0.4
      Esan_Nigeria,0.4
      Ethiopian_Anuak,0.4
      Ethiopian_Ari_cultivator,0.4
      Ethiopian_Gumuz,0.4
      Libyan,0.4
      Moroccan_South,0.4
      Palestinian,0.4
      Turkish_Trabzon,0.4
      Algerian,0.2
      Ashkenazi_Jew,0.2
      Assyrian,0.2
      Bantu_S.E.,0.2
      Bantu_S.W.,0.2
      Basque_French,0.2
      Basque_Spanish,0.2
      BedouinA,0.2
      BedouinB,0.2
      Cypriot,0.2
      Georgian_Imer,0.2
      Georgian_Jew,0.2
      Iranian_Lor,0.2
      Iranian_Mazandarani,0.2
      Iranian_Persian,0.2
      Iraqi_Jew,0.2
      Iyer,0.2
      Karachay,0.2
      Lebanese_Christian,0.2
      Lebanese_Druze,0.2
      Moroccan_Jew,0.2
      Saharawi,0.2
      Sandawe,0.2
      Spanish_Cantabria,0.2
      Syrian,0.2
      Uthmankhel,0.2
      Yadava,0.2
      Yemenite_Al_Bayda,0.2
      Yemenite_Al_Jawf,0.2
      Yemenite_Amran,0.2
      Yemenite_Dhamar,0.2
    Regions of Ancestry
    West Africa - East Africa - North Africa - Levant - Arabia - Southern Europe - South Asia - Oceania - Northern Europe - Asia East
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  13. #47
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    Ancient
    • PEN=0
      [1] "distance%=4.1174"

      TZA_Pemba_600BP,66.6
      MAR_EN,13
      KEN_Pastoral_IA,11.2
      AFG_Darra_i_kur_low_res,6.2
      Iberia_Central_CA_Afr,2
      MAR_LN,1
    • PEN=DEF
      [1] "distance%=6.6342"

      KEN_IA_Deloraine,27.8
      TZA_Pemba_600BP,26.8
      ZAF_400BP,15.2
      KEN_Pastoral_IA,10.8
      KEN_Pastoral_N,3.2
      KEN_Pastoral_N_Elmenteitan,3.2
      MAR_Iberomaurusian,1.6
      KEN_Early_Pastoral_N,1.4
      KEN_Pastoral_N_o,1.2
      TZN_PN,1.2
      TZA_Luxmanda_3100BP,1
      Canary_Islands_Guanche,0.6
      Iberia_Central_CA_Afr,0.6
      TZN_PN_o,0.6
      MAR_EN,0.4
      PAK_Swat_Udegram_IA,0.4
      BGR_MLBA,0.2
      Corded_Ware_Proto-Unetice_POL,0.2
      HRV_Sopot_MN,0.2
      HUN_Sopot_LN,0.2
      HUN_Tisza_LN,0.2
      Iberia_Southeast_c.10-16CE,0.2
      JPN_Jomon,0.2
      KAZ_Kyzlbulak_MLBA2,0.2
      KAZ_Wusun,0.2
      Kura-Araxes_ARM_Kaps,0.2
      Levant_JOR_EBA,0.2
      Levant_Natufian,0.2
      NPL_Samdzong_1500BP,0.2
      POL_BKG_N_o2,0.2
      ROU_N,0.2
      RUS_Ust_Ishim,0.2
      TJK_Sarazm_En,0.2
      TKM_Namazga_Tepe_En,0.2
      TKM_Namazga_Tepe_En_o,0.2
      USA_San_Francisco_May,0.2


    Modern
    • PEN=0
      [1] "distance%=2.1424"

      Yoruba,43.2
      Berber_MAR_TIZ,19
      Dinka,18.8
      Luhya_Kenya,7.8
      Berber_Algeria,5.8
      Somali,2.6
      Madiga,1.8
      Bantu_Kenya,0.6
      Karitiana,0.2
      Mandenka,0.2
    • PEN=DEF
      [1] "distance%=3.7415"

      Kikuyu,35.4
      Mandenka,7.8
      Mende_Sierra_Leone,6.2
      Gambian,6
      Igbo,5.4
      Yoruba,4.8
      Esan_Nigeria,4
      Kongo,4
      Berber_Algeria,3.6
      Luhya_Kenya,2.2
      Bantu_Kenya,1.8
      Ethiopian_Tigray,1.2
      Ethiopian_Amhara,1
      Sudanese,1
      Ethiopian_Afar,0.8
      Luo,0.8
      Algerian,0.6
      Berber_MAR_ERR,0.6
      Berber_Tunisia_Sen,0.6
      Dinka,0.6
      Ethiopian_Jew,0.6
      Moroccan_South,0.6
      Mozabite,0.6
      Saharawi,0.6
      Berber_MAR_TIZ,0.4
      Eritrean,0.4
      Irula,0.4
      Libyan,0.4
      Masai,0.4
      Somali,0.4
      Spanish_Murcia,0.4
      Tunisian,0.4
      Armenian_Hemsheni,0.2
      Azeri,0.2
      Balkar,0.2
      Bantu_S.E.,0.2
      Bantu_S.W.,0.2
      Basque_Spanish,0.2
      Bhumij,0.2
      Bosnian,0.2
      Cypriot,0.2
      English_Cornwall,0.2
      Ethiopian_Anuak,0.2
      Ethiopian_Oromo,0.2
      Finnish_East,0.2
      French_East,0.2
      Kashmiri_Pandit,0.2
      Khonda_Dora,0.2
      Kshatriya,0.2
      Maltese,0.2
      Moroccan,0.2
      North_Kannadi,0.2
      Onge,0.2
      Piramalai,0.2
      Santhal,0.2
      Spanish_Canarias,0.2
      Tajik_Shugnan,0.2
      Tatar_Kazan,0.2
      Turkish_Adana,0.2
      Turkmen,0.2
      Yemenite_Al_Bayda,0.2
      Yemenite_Jew,0.2
    Regions of Ancestry
    West Africa - East Africa - North Africa - Levant - Arabia - Southern Europe - South Asia - Oceania - Northern Europe - Asia East
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