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Thread: PCA G25_scaled - Africans only (Users & Ancients/Modern Avgs)

  1. #351
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    Canada African Union
    Quote Originally Posted by Angoliga View Post
    Samples added from the Wang et al paper (#15 total), along with "ITA_Sardinia_C_o" and "Iberia_Central_CA_Afr":
    Did a quick run with ancients plus Dinka plus Wang samples:


     

    Target: Luhya_Kenya
    Distance: 5.1131% / 0.05113127
    57.8 COG_NgongoMbata_220BP
    25.0 Dinka
    14.2 COG_Kindoki_230BP
    3.0 KEN_IA_Deloraine

    Target: Luo:Ayodo_502C
    Distance: 3.4409% / 0.03440940
    64.6 COG_NgongoMbata_220BP
    35.0 Dinka
    0.4 KEN_IA_Deloraine

    Target: Luo:Ayodo_412C
    Distance: 4.3279% / 0.04327892
    64.6 COG_NgongoMbata_220BP
    25.2 Dinka
    6.0 COG_Kindoki_230BP
    1.8 CMR_Shum_Laka_3000BP
    1.8 KEN_IA_Deloraine
    0.6 CMR_Shum_Laka_8000BP

    Target: Hutu_scaled
    Distance: 2.3162% / 0.02316234
    38.8 COG_NgongoMbata_220BP
    33.8 COG_Kindoki_230BP
    15.4 KEN_MoloCave_1500BP
    6.0 Dinka
    2.2 BWA_Taukome_1100BP
    1.8 BWA_Xaro_1400BP
    1.2 KEN_IA_Deloraine
    0.8 CMR_Shum_Laka_8000BP

    Target: Tutsi_AB
    Distance: 2.7579% / 0.02757879
    27.2 KEN_MoloCave_1500BP
    26.4 Dinka
    14.2 KEN_LuKENHill_3500BP
    14.0 COG_NgongoMbata_220BP
    7.6 KEN_HyraxHill_2300BP
    6.0 COG_Kindoki_230BP
    3.0 LUX_Loschbour
    1.6 KEN_Nyarindi_3500BP

    Target: Tutsi_DRC_2
    Distance: 1.7254% / 0.01725440
    38.8 KEN_MoloCave_1500BP
    19.4 KEN_HyraxHill_2300BP
    17.4 Dinka
    12.0 COG_NgongoMbata_220BP
    5.8 BWA_Taukome_1100BP
    5.2 COG_Kindoki_230BP
    0.6 LUX_Loschbour
    0.4 MAR_EN
    0.4 MAR_LN

    Target: Tutsi_DRC_1
    Distance: 2.0680% / 0.02068010
    28.2 KEN_MoloCave_1500BP
    20.6 Dinka
    19.6 KEN_LuKENHill_3500BP
    18.0 COG_NgongoMbata_220BP
    9.8 KEN_HyraxHill_2300BP
    2.4 BWA_Taukome_1100BP
    1.2 LUX_Loschbour
    0.2 Anatolia_Pinarbasi_HG

    Target: Hima_royal
    Distance: 2.0936% / 0.02093556
    39.4 KEN_LuKENHill_3500BP
    21.4 KEN_MoloCave_1500BP
    19.8 COG_NgongoMbata_220BP
    17.6 Dinka
    1.8 LUX_Loschbour

    Target: Kikuyu_Ayodo_4
    Distance: 1.9323% / 0.01932332
    32.4 KEN_MoloCave_1500BP
    32.0 COG_NgongoMbata_220BP
    15.4 COG_Kindoki_230BP
    8.4 Dinka
    7.8 KEN_HyraxHill_2300BP
    3.0 KEN_LuKENHill_3500BP
    1.0 Anatolia_Boncuklu_N

    Target: Kikuyu_Ayodo_2
    Distance: 1.8327% / 0.01832684
    33.8 COG_NgongoMbata_220BP
    24.8 KEN_MoloCave_1500BP
    23.2 Dinka
    9.4 KEN_LuKENHill_3500BP
    3.8 KEN_HyraxHill_2300BP
    3.2 COG_Kindoki_230BP
    0.8 Levant_PPNB
    0.6 Anatolia_Pinarbasi_HG
    0.4 LUX_Loschbour
    Last edited by Wangari; 06-30-2020 at 05:33 PM.

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  3. #352
    Registered Users
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    33
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    Canada African Union
    Quote Originally Posted by Angoliga View Post
    Samples added from the Wang et al paper (#15 total), along with "ITA_Sardinia_C_o" and "Iberia_Central_CA_Afr":


    Source Samples:

     
    KEN_LSA,-0.522448,0.044683,-0.010936,0.006137,0.004308,-0.006414,0.085309,-0.06692,0.076287,-0.06925,-0.011367,0.010491,-0.033003,0.000138,0.00855,-0.014983,0.021383,0.038513,-0.002137,-0.005253,-0.007612,-0.002968,0.002342,0.004699,-0.000718
    ETH_4500BP,-0.511066,0.043668,0.000754,0.000969,-0.00277,-0.011435,0.050997,-0.045229,0.089172,-0.087838,-0.012991,-0.002997,-0.031219,0.000688,0.02158,-0.029965,0.027772,0.039273,0.00176,-0.009004,0.000374,0.006183,-0.003451,-0.00241,-0.000838
    KEN_Pastoral_N,-0.3004929,0.0954598,-0.0263607,-0.0737732,0.0007384,-0.0365346,-0.0094944,-0.0014769,0.1220598,-0.0880928,-0.0057811,-0.0097713,-0.0017243,-0.0018993,0.0229232,-0.0209888,0.0222697,-0.0004942,0.0076929,-0.0014882,0.0019467,0.00298,-0.0040671,-0.0013375,-0.0010058
    Levant_JOR_EBA,0.0758823,0.147929,-0.0599623,-0.11402,-0.0056417,-0.0476903,-0.0108887,-0.013307,0.0336783,0.0075323,0.0157517,-0.0196823,0.041526,-0.0008717,-0.0031217,0.0228937,0.0018253,0.0010137,-0.0030583,0.0170917,0.0050743,0.011706,-0.0038617,0.0042577,-0.0071053
    Levant_PPNB,0.072847,0.1639064,-0.0316026,-0.1361132,0.0332986,-0.0645352,-0.0134426,-0.0147684,0.0741604,0.03601,0.0188046,-0.0150764,0.035738,0.0025596,-0.0217696,0.006099,0.0098048,-0.0013176,-0.0047264,0.0188088,-0.001797,0.0071472,0.0008872,-0.0056874,-0.0037602
    Levant_PPNC,0.067156,0.168578,-0.023004,-0.150842,0.028621,-0.071954,-0.013866,-0.017999,0.077719,0.037905,0.006496,-0.013188,0.032705,-0.000275,-0.014929,0.008486,-0.000913,-0.007728,-0.013575,0.012381,-0.009982,0.01014,0.002958,0.003012,-0.001916
    CHN_Tianyuan,-0.027318,-0.260991,-0.075424,0.071383,0.033545,-0.018407,-0.00799,-0.003,0.040291,0.021322,-0.006333,-0.005995,-0.003568,-0.00523,-0.000407,-0.000663,0.008084,0.002407,-0.001131,0.027263,-0.001747,0.008037,-0.008874,-0.010845,0.011256
    Yamnaya_UKR,0.119514,0.088351,0.044123,0.110144,-0.032006,0.038487,0.00799,0.002308,-0.05788,-0.076721,-0.002761,-0.002398,0.000743,-0.021056,0.033387,0.01485,0.004955,-0.008235,-0.002263,0.015007,0.002121,0.003462,0.002958,0.023 256,0.002874
    Anatolia_Barcin_N,0.1175998,0.180118,0.0035312,-0.101158,0.0510443,-0.0483875,-0.0043582,-0.0069334,0.0362287,0.0807473,0.0079718,0.0118803,-0.0234545,0.0004691,-0.0419807,-0.0101913,0.0233091,0.0019866,0.0136954,-0.0097489,-0.0142249,0.0057723,-0.0041232,-0.0031658,-0.0043437
    Levant_Natufian,0.020488,0.1431895,-0.0377125,-0.1387295,0.030775,-0.079484,-0.025616,-0.0175375,0.114329,0.002005,0.0332085,-0.0222555,0.076486,0.002133,0.0153365,0.009016,-0.0154505,-0.001014,-0.02206,0.040832,0.001497,0.0001235,-0.003636,-0.0044585,0.006287
    Yoruba,-0.6300625,0.0625011,0.022113,0.0167079,0.0005035,0 .0124741,-0.044417,0.0477673,-0.0488813,0.0327694,0.0046205,0.0007904,0.0230561, 0.0009509,0.0125232,-0.0096067,0.0070763,0.0004491,0.006022,-0.00299,0.0015542,0.0023156,-0.0017592,-0.0004711,-0.0004246
    Dinka,-0.577083,0.0507765,-0.0003773,-0.0075098,-0.0053855,-0.0016735,-0.0176848,0.0204222,0.081145,-0.0969495,-0.02107,0.022742,-0.0383172,-0.0011698,0.0101452,-0.021347,0.0186125,-0.0094382,0.0241968,-0.0241678,0.002402,0.003308,0.001479,0.0009038,0.0 096995
    Ju_hoan_North,-0.616466,0.0601194,0.0211942,0.028424,0.0025852,-0.0038486,0.2541404,-0.199192,0.0240112,0.007909,0.0032478,-0.0723558,-0.0255104,0.00867,0.0283928,-0.0321662,0.0461558,0.4102178,-0.1364076,0.003877,-0.0556018,-0.0051686,0.0126206,-0.0044826,0.0028978
    Mbuti,-0.6493608,0.0578852,0.0250785,0.038437,-0.001077,0.0054385,0.3631505,-0.291911,0.0193278,0.0323013,-0.0090938,0.2169692,0.1242805,3.45E-05,0.0080072,0.0017568,0.000717,-0.049567,0.015901,0.004471,0.0049288,-0.0020402,-0.002465,0.0057838,0.000389
    IRN_Wezmeh_N,0.037562,0.072103,-0.165556,-0.016473,-0.11756,0.01506,0.017861,-0.003231,-0.071583,-0.046835,0.003085,-0.003147,0.00669,0.000688,0.022122,0.053036,-0.011735,0.001014,0.014581,-0.035267,0.009358,-0.023741,-0.006655,-0.032896,0.019998
    IRN_Ganj_Dareh_N,0.0455292,0.0660095,-0.1518855,0.0026648,-0.1250232,0.0204982,0.0170972,-0.0017305,-0.0814005,-0.0579968,0.0004465,-0.001611,0.0072845,-0.0087735,0.0294512,0.0567152,-0.005248,0.0084882,0.007259,-0.037018,0.0075492,-0.0286258,-0.010322,-0.0404578,0.0265842
    ITA_Villabruna,0.121791,0.114755,0.18592,0.184111, 0.156337,0.060798,0.020211,0.035998,0.092445,0.018 041,-0.016239,-0.016186,0.016947,-0.010046,0.054017,0.067356,0.000782,0.005448,-0.008422,0.053526,0.100073,0.010758,-0.048313,-0.163517,0.01928
    GEO_CHG,0.091058,0.102568,-0.083344,-0.00323,-0.08617,0.020638,0.024911,-0.001846,-0.128236,-0.074717,-0.006333,0.023979,-0.054856,0.004404,0.026601,-0.03275,0.02386,-0.013429,-0.022249,0.034767,0.033815,-0.007048,0.006532,-0.025787,-0.002036
    MAR_LN,0.021626,0.148267,0.003394,-0.095285,0.047393,-0.054384,-0.027731,0.008769,0.083855,0.054124,0.020136,0.001 798,0.002973,-0.028901,0.004343,0.009944,0.032726,-0.014062,-0.033938,-5.00E-04,-0.018343,-0.02201,0.011709,-0.009881,-0.004191
    MAR_EN,-0.1735805,0.0919055,-0.0258325,-0.083657,0.0283125,-0.0596825,-0.079316,0.021461,0.1500185,0.0043735,0.0222475,-0.0264515,0.075148,-0.0461725,0.069353,-0.03381,0.0171455,-0.05549,-0.1487635,0.0340785,-0.038245,-0.118212,0.0826995,-0.009941,0.021615
    MAR_Iberomaurusian,-0.189857,0.0814452,-0.0242866,-0.085595,0.027636,-0.0552202,-0.0705968,0.0184146,0.155397,0.003499,0.0209156,-0.0318316,0.0747168,-0.0513334,0.0711988,-0.0363032,0.0052676,-0.066106,-0.1424162,0.0389938,-0.0376836,-0.1255322,0.0730118,-0.0137606,0.0164534
    Another quick run with the source samples above plus the new Wang samples:

    Some brief observations:
    • I wonder why KenPN spikes in Kikuyu?
    • Surprisingly, the common denominator in all these groups is Dinka!
    • DRC Tutsi have the highest amounts of KEN_MoloCave_1500BP - perhaps this might point to their migration route?

     


    Target: Masai_Ayodo_103M
    Distance: 2.0356% / 0.02035593
    40.2 Dinka
    32.0 KEN_Pastoral_N
    9.4 COG_NgongoMbata_220BP
    7.2 KEN_Kakapel_300BP
    4.2 Levant_PPNC
    3.8 KEN_Kakapel_900BP
    1.6 Mbuti
    0.6 IRN_Ganj_Dareh_N
    0.6 ITA_Villabruna
    0.4 CMR_Shum_Laka_8000BP

    Target: Masai_Ayodo_101M
    Distance: 1.6919% / 0.01691867
    44.4 Dinka
    37.8 KEN_Pastoral_N
    8.2 KEN_Kakapel_300BP
    2.0 CMR_Shum_Laka_3000BP
    2.0 KEN_Kakapel_900BP
    1.8 COG_NgongoMbata_220BP
    1.8 IRN_Wezmeh_N
    1.0 Mbuti
    0.6 ITA_Villabruna
    0.4 Levant_Natufian

    Target: Masai
    Distance: 1.2127% / 0.01212736
    41.4 KEN_Pastoral_N
    39.0 Dinka
    14.0 KEN_Kakapel_900BP
    2.6 CMR_Shum_Laka_8000BP
    2.2 Anatolia_Barcin_N
    0.8 KEN_Kakapel_3900BP

    Target: Sengwer
    Distance: 1.7152% / 0.01715223
    50.2 Dinka
    13.6 KEN_LuKENHill_3500BP
    9.8 KEN_HyraxHill_2300BP
    8.6 KEN_Kakapel_900BP
    8.0 KEN_MoloCave_1500BP
    4.8 KEN_LSA
    4.6 KEN_Kakapel_3900BP
    0.2 ITA_Villabruna
    0.2 Mbuti

    Target: Luhya_Kenya
    Distance: 2.1789% / 0.02178883
    77.8 KEN_Kakapel_300BP
    18.4 COG_NgongoMbata_220BP
    3.8 Dinka

    Target: Luo:Ayodo_430C
    Distance: 2.4493% / 0.02449269
    63.2 KEN_Kakapel_300BP
    20.4 Dinka
    9.6 BWA_Taukome_1100BP
    6.6 COG_Kindoki_230BP
    0.2 CMR_Shum_Laka_3000BP

    Target: Luo:Ayodo_412C
    Distance: 2.2806% / 0.02280573
    60.4 KEN_Kakapel_300BP
    29.0 COG_NgongoMbata_220BP
    8.2 Dinka
    2.0 CMR_Shum_Laka_3000BP
    0.4 Mbuti

    Target: Hutu_scaled
    Distance: 1.1552% / 0.01155200
    36.0 KEN_Kakapel_300BP
    21.8 COG_NgongoMbata_220BP
    13.2 COG_Kindoki_230BP
    10.0 BWA_Taukome_1100BP
    8.6 Dinka
    5.6 Levant_Natufian
    3.2 CMR_Shum_Laka_3000BP
    0.8 Yoruba
    0.6 KEN_LuKENHill_3500BP
    0.2 Levant_PPNB

    Target: Kikuyu_Nyeri_4
    Distance: 1.6769% / 0.01676883
    24.0 COG_NgongoMbata_220BP
    19.0 KEN_MoloCave_1500BP
    14.8 Dinka
    12.0 KEN_Pastoral_N
    10.6 KEN_Kakapel_300BP
    9.8 COG_Kindoki_230BP
    5.0 Levant_PPNC
    2.4 BWA_Taukome_1100BP
    1.0 CMR_Shum_Laka_3000BP
    1.0 KEN_Kakapel_900BP
    0.4 KEN_HyraxHill_2300BP

    Target: Kikuyu_Nyeri_1
    Distance: 2.3739% / 0.02373863
    27.6 Dinka
    21.6 KEN_Kakapel_300BP
    21.6 KEN_Pastoral_N
    18.0 COG_NgongoMbata_220BP
    3.6 Levant_PPNB
    2.8 COG_Kindoki_230BP
    1.8 Yoruba
    1.6 Ju_hoan_North
    1.0 BWA_Taukome_1100BP
    0.4 Anatolia_Barcin_N

    Target: Kikuyu_Average
    Distance: 1.1729% / 0.01172852
    30.8 KEN_Pastoral_N
    20.4 KEN_Kakapel_300BP
    19.4 COG_NgongoMbata_220BP
    19.4 Dinka
    3.8 BWA_Taukome_1100BP
    2.8 COG_Kindoki_230BP
    1.8 Levant_PPNC
    1.0 Yoruba
    0.6 Ju_hoan_North

    Target: Tutsi_AB
    Distance: 1.7515% / 0.01751499
    39.4 KEN_Pastoral_N
    25.0 KEN_Kakapel_300BP
    24.0 Dinka
    3.8 Levant_Natufian
    2.8 KEN_Kakapel_900BP
    2.8 KEN_Nyarindi_3500BP
    0.8 ITA_Villabruna
    0.8 Ju_hoan_North
    0.6 COG_Kindoki_230BP

    Target: Tutsi_DRC_3
    Distance: 1.5332% / 0.01533247
    28.6 KEN_MoloCave_1500BP
    24.4 Dinka
    12.8 KEN_Pastoral_N
    12.0 KEN_Kakapel_300BP
    8.6 BWA_Taukome_1100BP
    6.6 Levant_Natufian
    3.4 MAR_EN
    2.0 KEN_Nyarindi_3500BP
    1.2 ITA_Villabruna
    0.4 Mbuti

    Target: Tutsi_DRC_2
    Distance: 1.4307% / 0.01430736
    37.6 KEN_MoloCave_1500BP
    22.0 Dinka
    10.0 KEN_Kakapel_300BP
    7.8 Yoruba
    6.4 KEN_HyraxHill_2300BP
    5.2 KEN_Pastoral_N
    4.8 BWA_Taukome_1100BP
    3.6 Levant_Natufian
    1.2 MAR_EN
    0.6 MAR_LN
    0.6 Mbuti
    0.2 ITA_Villabruna

    Target: Tutsi_DRC_1
    Distance: 1.5382% / 0.01538190
    35.0 Dinka
    22.4 KEN_Pastoral_N
    13.0 KEN_MoloCave_1500BP
    9.4 KEN_Kakapel_300BP
    8.0 BWA_Taukome_1100BP
    4.2 Levant_PPNC
    4.0 Levant_Natufian

    2.2 KEN_LuKENHill_3500BP
    1.2 MAR_EN
    0.4 Ju_hoan_North
    0.2 ITA_Villabruna

    Target: Hima_royal
    Distance: 1.6585% / 0.01658459
    42.8 Dinka
    13.4 KEN_Pastoral_N
    11.6 Levant_Natufian
    10.0 COG_NgongoMbata_220BP
    8.0 KEN_LuKENHill_3500BP
    7.8 KEN_MoloCave_1500BP
    3.0 Levant_PPNB
    1.8 Ju_hoan_North
    1.4 KEN_Kakapel_900BP
    0.2 Mbuti
    Last edited by Wangari; 06-30-2020 at 05:39 PM.

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  5. #353
    Registered Users
    Posts
    50
    Ethnicity
    Nyiginya Clan
    Nationality
    Rwanda
    Y-DNA (P)
    E-M293
    mtDNA (M)
    L1

    Rwanda
    Quote Originally Posted by Wangari View Post
    Another quick run with the source samples above plus the new Wang samples:

    I wonder why KenPN spikes in Kikuyu? Surprisingly, the common denominator in all these groups is Dinka! DRC Tutsi have the highest amounts of KEN_MoloCave_1500BP - perhaps this might point to their migration route?

     


    Target: Masai_Ayodo_103M
    Distance: 2.0356% / 0.02035593
    40.2 Dinka
    32.0 KEN_Pastoral_N
    9.4 COG_NgongoMbata_220BP
    7.2 KEN_Kakapel_300BP
    4.2 Levant_PPNC
    3.8 KEN_Kakapel_900BP
    1.6 Mbuti
    0.6 IRN_Ganj_Dareh_N
    0.6 ITA_Villabruna
    0.4 CMR_Shum_Laka_8000BP

    Target: Masai_Ayodo_101M
    Distance: 1.6919% / 0.01691867
    44.4 Dinka
    37.8 KEN_Pastoral_N
    8.2 KEN_Kakapel_300BP
    2.0 CMR_Shum_Laka_3000BP
    2.0 KEN_Kakapel_900BP
    1.8 COG_NgongoMbata_220BP
    1.8 IRN_Wezmeh_N
    1.0 Mbuti
    0.6 ITA_Villabruna
    0.4 Levant_Natufian

    Target: Masai
    Distance: 1.2127% / 0.01212736
    41.4 KEN_Pastoral_N
    39.0 Dinka
    14.0 KEN_Kakapel_900BP
    2.6 CMR_Shum_Laka_8000BP
    2.2 Anatolia_Barcin_N
    0.8 KEN_Kakapel_3900BP

    Target: Sengwer
    Distance: 1.7152% / 0.01715223
    50.2 Dinka
    13.6 KEN_LuKENHill_3500BP
    9.8 KEN_HyraxHill_2300BP
    8.6 KEN_Kakapel_900BP
    8.0 KEN_MoloCave_1500BP
    4.8 KEN_LSA
    4.6 KEN_Kakapel_3900BP
    0.2 ITA_Villabruna
    0.2 Mbuti

    Target: Luhya_Kenya
    Distance: 2.1789% / 0.02178883
    77.8 KEN_Kakapel_300BP
    18.4 COG_NgongoMbata_220BP
    3.8 Dinka

    Target: Luo:Ayodo_430C
    Distance: 2.4493% / 0.02449269
    63.2 KEN_Kakapel_300BP
    20.4 Dinka
    9.6 BWA_Taukome_1100BP
    6.6 COG_Kindoki_230BP
    0.2 CMR_Shum_Laka_3000BP

    Target: Luo:Ayodo_412C
    Distance: 2.2806% / 0.02280573
    60.4 KEN_Kakapel_300BP
    29.0 COG_NgongoMbata_220BP
    8.2 Dinka
    2.0 CMR_Shum_Laka_3000BP
    0.4 Mbuti

    Target: Hutu_scaled
    Distance: 1.1552% / 0.01155200
    36.0 KEN_Kakapel_300BP
    21.8 COG_NgongoMbata_220BP
    13.2 COG_Kindoki_230BP
    10.0 BWA_Taukome_1100BP
    8.6 Dinka
    5.6 Levant_Natufian
    3.2 CMR_Shum_Laka_3000BP
    0.8 Yoruba
    0.6 KEN_LuKENHill_3500BP
    0.2 Levant_PPNB

    Target: Kikuyu_Nyeri_4
    Distance: 1.6769% / 0.01676883
    24.0 COG_NgongoMbata_220BP
    19.0 KEN_MoloCave_1500BP
    14.8 Dinka
    12.0 KEN_Pastoral_N
    10.6 KEN_Kakapel_300BP
    9.8 COG_Kindoki_230BP
    5.0 Levant_PPNC
    2.4 BWA_Taukome_1100BP
    1.0 CMR_Shum_Laka_3000BP
    1.0 KEN_Kakapel_900BP
    0.4 KEN_HyraxHill_2300BP

    Target: Kikuyu_Nyeri_1
    Distance: 2.3739% / 0.02373863
    27.6 Dinka
    21.6 KEN_Kakapel_300BP
    21.6 KEN_Pastoral_N
    18.0 COG_NgongoMbata_220BP
    3.6 Levant_PPNB
    2.8 COG_Kindoki_230BP
    1.8 Yoruba
    1.6 Ju_hoan_North
    1.0 BWA_Taukome_1100BP
    0.4 Anatolia_Barcin_N

    Target: Kikuyu_Kiambu
    Distance: 1.7450% / 0.01744998
    38.6 KEN_Kakapel_300BP
    16.8 KEN_LuKENHill_3500BP
    16.2 Dinka
    13.2 KEN_Pastoral_N
    12.8 COG_NgongoMbata_220BP
    2.2 Levant_Natufian
    0.2 KEN_HyraxHill_2300BP

    Target: Kikuyu_Average
    Distance: 1.1729% / 0.01172852
    30.8 KEN_Pastoral_N
    20.4 KEN_Kakapel_300BP
    19.4 COG_NgongoMbata_220BP
    19.4 Dinka
    3.8 BWA_Taukome_1100BP
    2.8 COG_Kindoki_230BP
    1.8 Levant_PPNC
    1.0 Yoruba
    0.6 Ju_hoan_North

    Target: Tutsi_AB
    Distance: 1.7515% / 0.01751499
    39.4 KEN_Pastoral_N
    25.0 KEN_Kakapel_300BP
    24.0 Dinka
    3.8 Levant_Natufian
    2.8 KEN_Kakapel_900BP
    2.8 KEN_Nyarindi_3500BP
    0.8 ITA_Villabruna
    0.8 Ju_hoan_North
    0.6 COG_Kindoki_230BP

    Target: Tutsi_DRC_3
    Distance: 1.5332% / 0.01533247
    28.6 KEN_MoloCave_1500BP
    24.4 Dinka
    12.8 KEN_Pastoral_N
    12.0 KEN_Kakapel_300BP
    8.6 BWA_Taukome_1100BP
    6.6 Levant_Natufian
    3.4 MAR_EN
    2.0 KEN_Nyarindi_3500BP
    1.2 ITA_Villabruna
    0.4 Mbuti

    Target: Tutsi_DRC_2
    Distance: 1.4307% / 0.01430736
    37.6 KEN_MoloCave_1500BP
    22.0 Dinka
    10.0 KEN_Kakapel_300BP
    7.8 Yoruba
    6.4 KEN_HyraxHill_2300BP
    5.2 KEN_Pastoral_N
    4.8 BWA_Taukome_1100BP
    3.6 Levant_Natufian
    1.2 MAR_EN
    0.6 MAR_LN
    0.6 Mbuti
    0.2 ITA_Villabruna

    Target: Tutsi_DRC_1
    Distance: 1.5382% / 0.01538190
    35.0 Dinka
    22.4 KEN_Pastoral_N
    13.0 KEN_MoloCave_1500BP
    9.4 KEN_Kakapel_300BP
    8.0 BWA_Taukome_1100BP
    4.2 Levant_PPNC
    4.0 Levant_Natufian
    2.2 KEN_LuKENHill_3500BP
    1.2 MAR_EN
    0.4 Ju_hoan_North
    0.2 ITA_Villabruna

    Target: Hima_royal
    Distance: 1.6585% / 0.01658459
    42.8 Dinka
    13.4 KEN_Pastoral_N
    11.6 Levant_Natufian
    10.0 COG_NgongoMbata_220BP
    8.0 KEN_LuKENHill_3500BP
    7.8 KEN_MoloCave_1500BP
    3.0 Levant_PPNB
    1.8 Ju_hoan_North
    1.4 KEN_Kakapel_900BP
    0.2 Mbuti
    It is sad we are missing Congo_MatangauTuru_750BP(North East RDC), it would have given us a better picture of how Tutsi/Hima ancestors may have looked like. To me it seems, like we descend from TZA_Luxmanda people like the Congo_MatangaiTuru_750BP who later mixed with PIA people, explaining why the Hima_Royal lady have high cushitic admixtures.

    In some runs, she is consistently ~60+% Somali_Somali, and ~70% Rendille.

    Can you please run Hima_Royal with Somali_Somali, Dinka, Luhya, San, Mbuti, and see what I mean

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  7. #354
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    Quote Originally Posted by Alfa View Post
    It is sad we are missing Congo_MatangauTuru_750BP(North East RDC), it would have given us a better picture of how Tutsi/Hima ancestors may have looked like. To me it seems, like we descend from TZA_Luxmanda people like the Congo_MatangaiTuru_750BP who later mixed with PIA people, explaining why the Hima_Royal lady have high cushitic admixtures.

    In some runs, she is consistently ~60+% Somali_Somali, and ~70% Rendille.

    Can you please run Hima_Royal with Somali_Somali, Dinka, Luhya, San, Mbuti, and see what I mean
    Are the Tutsi/Hima royalty more Cushitic on average than the other Tutsis/related peoples?

    Edit: Somali runs with the new samples

     
    Target: Drobbah_scaled
    Distance: 1.2746% / 0.01274637
    26.4 KEN_Pastoral_N
    23.6 TZA_PN
    21.6 KEN_Pastoral_IA
    13.2 KEN_LuKENHill_3500BP
    8.6 KEN_HyraxHill_2300BP
    2.8 EGY_Hellenistic
    1.0 MAR_EN
    0.8 RUS_Saltovo-Mayaki_low_res
    0.6 KEN_Early_Pastoral_N
    0.4 BLZ_SakiTzul_7400BP
    0.4 RUS_Yana_MA
    0.4 VUT_2350BP
    0.2 TWN_Gongguan

    Target: Mother_scaled
    Distance: 1.6824% / 0.01682396
    41.8 TZA_PN
    30.2 KEN_HyraxHill_2300BP
    17.6 KEN_Pastoral_IA
    6.6 KEN_Pastoral_N_o
    2.8 TUR_Titris_Hoyuk_EBA
    0.8 CHN_Chuanyun_Historic
    0.2 IRN_Wezmeh_N

    Target: Father_scaled
    Distance: 1.5151% / 0.01515143
    47.4 KEN_Pastoral_N
    16.8 KEN_LuKENHill_3500BP
    16.4 TZA_PN
    13.2 KEN_Pastoral_IA
    2.2 KEN_MoloCave_1500BP
    2.0 MAR_EN
    1.0 PER_LaGalgada_4100BP
    0.6 IRN_Wezmeh_N
    0.4 KEN_HyraxHill_2300BP


    Target: Somali_Kenya
    Distance: 1.1110% / 0.01110981
    50.8 KEN_Pastoral_N
    26.2 KEN_Pastoral_IA
    14.2 TZA_PN
    5.0 Levant_Natufian
    2.2 COG_NgongoMbata_220BP
    0.8 IRN_Tepe_Abdul_Hosein_N
    0.4 KEN_Pastoral_N_o
    0.4 PAK_Saidu_Sharif_H_o

    Target: Somali
    Distance: 1.3745% / 0.01374451
    28.4 KEN_Pastoral_N
    24.4 TZA_PN
    23.2 KEN_Pastoral_IA
    12.8 KEN_HyraxHill_2300BP
    4.2 Levant_Natufian
    3.4 KEN_Pastoral_N_o
    1.2 IRN_Tepe_Abdul_Hosein_N
    1.0 EGY_Hellenistic
    0.6 MAR_EN
    0.6 PAK_Saidu_Sharif_H_o
    0.2 USA_Island_Chumash_SanMiguel
    Last edited by drobbah; 06-30-2020 at 03:45 PM.

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  9. #355
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    Quote Originally Posted by drobbah View Post
    Are the Tutsi/Hima royalty more Cushitic on average than the other Tutsis/related peoples?

    Edit: Somali runs with the new samples

     
    Target: Drobbah_scaled
    Distance: 1.2746% / 0.01274637
    26.4 KEN_Pastoral_N
    23.6 TZA_PN
    21.6 KEN_Pastoral_IA
    13.2 KEN_LuKENHill_3500BP
    8.6 KEN_HyraxHill_2300BP
    2.8 EGY_Hellenistic
    1.0 MAR_EN
    0.8 RUS_Saltovo-Mayaki_low_res
    0.6 KEN_Early_Pastoral_N
    0.4 BLZ_SakiTzul_7400BP
    0.4 RUS_Yana_MA
    0.4 VUT_2350BP
    0.2 TWN_Gongguan

    Target: Mother_scaled
    Distance: 1.6824% / 0.01682396
    41.8 TZA_PN
    30.2 KEN_HyraxHill_2300BP
    17.6 KEN_Pastoral_IA
    6.6 KEN_Pastoral_N_o
    2.8 TUR_Titris_Hoyuk_EBA
    0.8 CHN_Chuanyun_Historic
    0.2 IRN_Wezmeh_N

    Target: Father_scaled
    Distance: 1.5151% / 0.01515143
    47.4 KEN_Pastoral_N
    16.8 KEN_LuKENHill_3500BP
    16.4 TZA_PN
    13.2 KEN_Pastoral_IA
    2.2 KEN_MoloCave_1500BP
    2.0 MAR_EN
    1.0 PER_LaGalgada_4100BP
    0.6 IRN_Wezmeh_N
    0.4 KEN_HyraxHill_2300BP


    Target: Somali_Kenya
    Distance: 1.1110% / 0.01110981
    50.8 KEN_Pastoral_N
    26.2 KEN_Pastoral_IA
    14.2 TZA_PN
    5.0 Levant_Natufian
    2.2 COG_NgongoMbata_220BP
    0.8 IRN_Tepe_Abdul_Hosein_N
    0.4 KEN_Pastoral_N_o
    0.4 PAK_Saidu_Sharif_H_o

    Target: Somali
    Distance: 1.3745% / 0.01374451
    28.4 KEN_Pastoral_N
    24.4 TZA_PN
    23.2 KEN_Pastoral_IA
    12.8 KEN_HyraxHill_2300BP
    4.2 Levant_Natufian
    3.4 KEN_Pastoral_N_o
    1.2 IRN_Tepe_Abdul_Hosein_N
    1.0 EGY_Hellenistic
    0.6 MAR_EN
    0.6 PAK_Saidu_Sharif_H_o
    0.2 USA_Island_Chumash_SanMiguel
    I don't know much about Ankole royal family, but I would assume they score higher cudhitic than an average Hima.

    I have seen 2 Tutsi (they are much more Mota admixed : 1Munyamulenge_RDC and another one is from Rwanda) are more cushitic than this Hima_Royal person, but those guys are not from royal family. Most likely, Rwanda royal family member even the current Rwanda President are definitely more cushitic than this Hima_Royal lady.

    Royal family member who did not mingle too much with commoners are more cushitic thanbthe average Tutsi/Hima.

    Also, it seems like people who are from traditionally Tutsi dominated area in Bdi/Rda are less West africa, and slightly more cushitic.
    Last edited by Alfa; 06-30-2020 at 04:19 PM.

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  11. #356
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    Quote Originally Posted by drobbah View Post
    Are the Tutsi/Hima royalty more Cushitic on average than the other Tutsis/related peoples?

    Edit: Somali runs with the new samples

     
    Target: Drobbah_scaled
    Distance: 1.2746% / 0.01274637
    26.4 KEN_Pastoral_N
    23.6 TZA_PN
    21.6 KEN_Pastoral_IA
    13.2 KEN_LuKENHill_3500BP
    8.6 KEN_HyraxHill_2300BP
    2.8 EGY_Hellenistic
    1.0 MAR_EN
    0.8 RUS_Saltovo-Mayaki_low_res
    0.6 KEN_Early_Pastoral_N
    0.4 BLZ_SakiTzul_7400BP
    0.4 RUS_Yana_MA
    0.4 VUT_2350BP
    0.2 TWN_Gongguan

    Target: Mother_scaled
    Distance: 1.6824% / 0.01682396
    41.8 TZA_PN
    30.2 KEN_HyraxHill_2300BP
    17.6 KEN_Pastoral_IA
    6.6 KEN_Pastoral_N_o
    2.8 TUR_Titris_Hoyuk_EBA
    0.8 CHN_Chuanyun_Historic
    0.2 IRN_Wezmeh_N

    Target: Father_scaled
    Distance: 1.5151% / 0.01515143
    47.4 KEN_Pastoral_N
    16.8 KEN_LuKENHill_3500BP
    16.4 TZA_PN
    13.2 KEN_Pastoral_IA
    2.2 KEN_MoloCave_1500BP
    2.0 MAR_EN
    1.0 PER_LaGalgada_4100BP
    0.6 IRN_Wezmeh_N
    0.4 KEN_HyraxHill_2300BP


    Target: Somali_Kenya
    Distance: 1.1110% / 0.01110981
    50.8 KEN_Pastoral_N
    26.2 KEN_Pastoral_IA
    14.2 TZA_PN
    5.0 Levant_Natufian
    2.2 COG_NgongoMbata_220BP
    0.8 IRN_Tepe_Abdul_Hosein_N
    0.4 KEN_Pastoral_N_o
    0.4 PAK_Saidu_Sharif_H_o

    Target: Somali
    Distance: 1.3745% / 0.01374451
    28.4 KEN_Pastoral_N
    24.4 TZA_PN
    23.2 KEN_Pastoral_IA
    12.8 KEN_HyraxHill_2300BP
    4.2 Levant_Natufian
    3.4 KEN_Pastoral_N_o
    1.2 IRN_Tepe_Abdul_Hosein_N
    1.0 EGY_Hellenistic
    0.6 MAR_EN
    0.6 PAK_Saidu_Sharif_H_o
    0.2 USA_Island_Chumash_SanMiguel
    Did you use ancient samples + Wang samples only?

  12. #357
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    Quote Originally Posted by Wangari View Post
    Did you use ancient samples + Wang samples only?
    Yes I used both of them.It's surprising that both the Kenyan Somali and the Rendille get 2.2% COG_Kindoki_230BP unlike the Somalia samples and my family (Somaliland-NW Somalia)

    Target: Rendille
    Distance: 1.4758% / 0.01475751
    41.4 KEN_Pastoral_N
    28.0 TZA_PN
    21.0 KEN_Pastoral_IA
    5.2 KEN_Kakapel_900BP
    2.2 COG_Kindoki_230BP
    1.6 IRN_Seh_Gabi_LN
    0.2 KEN_Pastoral_N_o
    0.2 MAR_EN
    0.2 VUT_2300BP_all

    Target: Iraqw
    Distance: 0.6475% / 0.00647549
    28.4 KEN_Pastoral_IA
    21.8 KEN_Early_Pastoral_N
    13.2 KEN_Pastoral_N
    12.2 KEN_LuKENHill_3500BP
    8.6 TZA_PN
    5.4 ETH_4500BP
    3.0 TZA_Zanzibar_1300BP
    2.2 ZAF_400BP
    1.8 KEN_IA_Deloraine
    1.4 COG_NgongoMbata_220BP
    1.0 ZAF_1200BP
    0.4 ARG_Aconcagua_500BP
    0.4 KEN_Nyarindi_3500BP
    0.2 ZAF_2000BP

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  14. #358
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    Quote Originally Posted by Alfa View Post
    Can you please run Hima_Royal with Somali_Somali, Dinka, Luhya, San, Mbuti, and see what I mean
    Here you go:

    *I did the first run with the requested samples and for fun, I did another run with Maasai just to see if there would be a difference. I included all my Tutsi samples for comparison.

    Screenshot_20200630-140230~2.png
    Screenshot_20200630-141512~2.png

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  16. #359
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    Quote Originally Posted by Wangari View Post
    Here you go:

    *I did the first run with the requested samples and for fun, I did another run with Maasai just to see if there would be a difference. I included all my Tutsi samples for comparison.

    Screenshot_20200630-140230~2.png
    Screenshot_20200630-141512~2.png
    Interesting.

    Can you please
    1)replace Masai with ETHIO_4500BP
    2) Replace Luhya with Yoruba

    Thank you

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    Deleted
    Last edited by mpatsibihugu89; 07-01-2020 at 12:08 AM.

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