The Pastoralists have more Anatolia_N affinity but most of that seems to Levantine in origin since they are also have proportionally higher Iberomaurusian.Originally Posted by drobbah
Most modern Horners (at least the Semitic and East Cushitic speakers)) seem to have more CHG/Iran_N and Dinka ancestry.
Last edited by Mnemonics; 04-11-2021 at 02:55 AM.
afbarwaaqo (05-23-2021), Alfa (04-11-2021), drobbah (04-10-2021), Tsakhur (10-22-2021)
I think the increased Sudanese ancestry entered the Horn from the South or West (Gambela,Anuak regions) creating IA Kenyan-like populations or Elementein populations.The Arabian-like ancestry in the Horn is more trickier as we know the South Semites that ultimately became the Ethio-Semites (J-P56 carriers) definitely arrived in large numbers with them but I don't think Ethio-Semitic type of Arabian ancestry was introduced to the Somaloid peoples (Somalis,Rendille,Maay etc) as we lack J-P56 (relatively low to non-existent Mota) and the only Ethio-Semitic loanwords in Northern Somali are from Harari/related languages & Ge'ez (historical era influueces from both medieval & antiquity).The Arabian in Oromos is probably mostly of Ethio-Semitic origin and diffused south into central & southern Ethiopia (homelands of the Oromos) from Eritrea/Tigray region.
We do know that 3-4k years ago camels were domesticated in SE Arabia and managed to arrive in the Eastern Horn with camel pastoralism related terms that were from Yemen but I did find this quote interesting:
As of right now the lone uploaded Somali J-P58 sample has a tmrca with a northern yemeni and a Hadhraami Yemeni with a tmrca between 3100 to 1950 ybp.There's still a high chance that these J-P58 Somalis are just recent medieval Mehri as the Futuh Al Habasha mentioned 2000 men from Al Mahra fought in the late stages of the war and this is equivalent manpower to individual Somali clans like my Habar Magaadle (vast majority of modern Isaaqs) which only brought 2200 men to the side of the Imam.East Cushitic *gaala
‘camel’ is from Semitic *gamal- ‘id.’ and the most likely intermediary has
been a language spoken in Southern Arabia when camels were introduced
to the eastern Horn ca. 2000 years ago, as argued in Banti (2000: 49 f.).
Gml ‘camel’ is well attested in Sabaic. However, the loss of -m- is not regular
in ASA, nor in NS or any known East Cushitic language, and points to a
different language: loss of -m- between vowels occurs several times in
Southern Ethiosemitic and in MSA. (Modern South Arabian like Mehri/Soqotri)
Rendille
Oromos & Somalis
Eritreans & Agaws
Code:Target: Drobbah Distance: 1.3922% / 0.01392203 53.4 KEN_Pastoral_N 34.6 KEN_Pastoral_IA 7.4 Saudi 4.6 Taforalt Target: Drobbah_FTDNA_scaled Distance: 2.8058% / 0.02805777 94.8 South/Central_Somali 5.2 Saudi
It seems like the Tanzania_N/IA samples have minor Iran_N/CHG and with the IA samples having about twice that of PN samples.
We really need pastoral neolithic cushitic samples from the Horn or from Sudan.
afbarwaaqo (05-23-2021), Alfa (04-19-2021), Awale (05-23-2021), Deftextra (04-20-2021), diini95 (04-19-2021), Hurricane (05-03-2021), Mnemonics (04-19-2021), ThaYamamoto (04-19-2021), Tsakhur (10-22-2021), Typic (04-19-2021)
Bedouin Arab LT related variant in modern Horners + Northern Sudanese to the exclusion of SE Africans.Perhaps related to the introduction of camels in Somaloid camel herding speaking groups & Afars? And obviously the medieval Bedouin Arabian migration to Sudan.
Possible indigenous Horner (North + East Cushitic) LT variantFinally, the recent migration of non-Africans into Africa is argued to have contributed to the gene-pool of eastern African populations. In particular, studies have suggested that the derived G−13915 allele—found mainly in populations from the Arabian Peninsula, Sudan, Kenya, and the Horn o f Africa (5)—arose in the Arabian Peninsula ~4100 ya and was brought to eastern Africa by migrating Arabic-speaking herders >1300 ya
In addition, the G−13907 allele is found mainly in Afroasiatic-speakers from northern Sudan, northern Kenya and Ethiopia (1,3,5,6,10) but is absent in southern Cushitic-speakers from Tanzania. Although it has been speculated that G−13907 allele arose in eastern Cushitic-speakers from Ethiopia (5,91), the geographic origin of this mutation remains unclear
PN samples and modern SE Africans probably carried another LT variant
Given the high frequency of the C−14010 allele in Tanzanian populations and its virtual absence in southern Sudanese Nilo-Saharan-speakers (5,6), it has been argued that the C−14010 mutation likely arose first in Afroasiatic Cushitic-speaking populations and then was introduced into Nilo-Saharan Nilotic-speakers through admixture. However, regardless of population origin, it is thought that the C−14010 allele spread rapidly throughout East Africa together with the cultural practice of herding consistent with a demic diffusion model.Archaeological data also suggested that a more specialized reliance on milk arose in herding communities throughout southern Kenya and northern Tanzania after 3300 ya (108)
Code:Target: Drobbah Distance: 1.3922% / 0.01392203 53.4 KEN_Pastoral_N 34.6 KEN_Pastoral_IA 7.4 Saudi 4.6 Taforalt Target: Drobbah_FTDNA_scaled Distance: 2.8058% / 0.02805777 94.8 South/Central_Somali 5.2 Saudi
Recently I have being going through the Mehri/MSA dictionary in an attempt to found MSA related words in Northern Somali that aren't clearly of Arabic origin.Found a couple words already like bakawra (bakoorad) or xallay which is Somali for xalay (night) with some other pastoralist related words that I'm less sure of...
Kenya_PastoralIA + SFI-43 seems to the most robust model for Somalis when including these new Kenya_PastoralN rich Iraqw samples in the modern right pops list.
Code:left pops: SomaliHigh Kenya_PastoralIA Egyptian_SFI-43 right pops: Biaka.DG Khomani_San.DG Mende.DG Luo.DG Sardinian.DG Cretan.DG Russian.DG Karitiana.DG Abkhasian.DG Ulchi.DG Druze.DG Han.DG Iranian.DG Balochi.DG Jew_Iraqi.DG Jew_Yemenite.DG Samaritan.DG Aari.DG Iraqw.DG Mbuti.DG Saharawi.DG 0 SomaliHigh 4 1 Kenya_PastoralIA 4 2 Egyptian_SFI-43 1 3 Biaka.DG 2 4 Khomani_San.DG 2 5 Mende.DG 2 6 Luo.DG 2 7 Sardinian.DG 3 8 Cretan.DG 2 9 Russian.DG 2 10 Karitiana.DG 3 11 Abkhasian.DG 2 12 Ulchi.DG 2 13 Druze.DG 2 14 Han.DG 3 15 Iranian.DG 2 16 Balochi.DG 2 17 Jew_Iraqi.DG 2 18 Jew_Yemenite.DG 2 19 Samaritan.DG 1 20 Aari.DG 2 21 Iraqw.DG 2 22 Mbuti.DG 4 23 Saharawi.DG 2 jackknife block size: 0.050 snps: 1148346 indivs: 55 number of blocks for block jackknife: 714 ## ncols: 1148346 coverage: SomaliHigh 1039653 coverage: Kenya_PastoralIA 661264 coverage: Egyptian_SFI-43 473257 coverage: Biaka.DG 1121248 coverage: Khomani_San.DG 1121214 coverage: Mende.DG 1121272 coverage: Luo.DG 1121311 coverage: Sardinian.DG 1121428 coverage: Cretan.DG 1121014 coverage: Russian.DG 1121371 coverage: Karitiana.DG 1121384 coverage: Abkhasian.DG 1121318 coverage: Ulchi.DG 1121278 coverage: Druze.DG 1121288 coverage: Han.DG 1121405 coverage: Iranian.DG 1121381 coverage: Balochi.DG 1121259 coverage: Jew_Iraqi.DG 1121367 coverage: Jew_Yemenite.DG 1121336 coverage: Samaritan.DG 1115266 coverage: Aari.DG 1121299 coverage: Iraqw.DG 1121349 coverage: Mbuti.DG 1121427 coverage: Saharawi.DG 1121356 Effective number of blocks: 623.335 numsnps used: 316354 codimension 1 f4info: f4rank: 1 dof: 19 chisq: 12.240 tail: 0.875096009 dofdiff: 21 chisqdiff: -12.240 taildiff: 1 B: scale 1.000 Khomani_San.DG -0.022 Mende.DG -0.010 Luo.DG -0.006 Sardinian.DG 1.315 Cretan.DG 1.311 Russian.DG 1.264 Karitiana.DG 1.010 Abkhasian.DG 1.271 Ulchi.DG 0.965 Druze.DG 1.271 Han.DG 0.975 Iranian.DG 1.243 Balochi.DG 1.177 Jew_Iraqi.DG 1.274 Jew_Yemenite.DG 1.210 Samaritan.DG 1.267 Aari.DG 0.260 Iraqw.DG 0.366 Mbuti.DG -0.038 Saharawi.DG 0.997 A: scale 108.782 Kenya_PastoralIA -0.420 Egyptian_SFI-43 1.350 full rank f4info: f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 19 chisqdiff: 12.240 taildiff: 0.875096009 B: scale 248.486 79.245 Khomani_San.DG 0.001 -0.005 Mende.DG -0.050 0.003 Luo.DG -0.002 0.019 Sardinian.DG -1.314 1.308 Cretan.DG -1.340 1.299 Russian.DG -1.213 1.279 Karitiana.DG -1.013 1.020 Abkhasian.DG -1.258 1.271 Ulchi.DG -1.020 0.966 Druze.DG -1.268 1.268 Han.DG -1.021 0.969 Iranian.DG -1.225 1.238 Balochi.DG -1.118 1.184 Jew_Iraqi.DG -1.277 1.264 Jew_Yemenite.DG -1.168 1.216 Samaritan.DG -1.311 1.264 Aari.DG -0.311 0.273 Iraqw.DG -0.430 0.381 Mbuti.DG 0.039 -0.015 Saharawi.DG -0.979 1.001 A: scale 1.414 1.414 Kenya_PastoralIA 1.414 0.000 Egyptian_SFI-43 0.000 1.414 best coefficients: 0.763 0.237 Jackknife mean: 0.762335549 0.237664451 std. errors: 0.014 0.014 error covariance (* 1,000,000) 184 -184 -184 184 summ: SomaliHigh 2 0.875096 0.762 0.238 184 -184 184 fixed pat wt dof chisq tail prob 00 0 19 12.240 0.875096 0.763 0.237 01 1 20 252.235 0 1.000 0.000 10 1 20 2149.164 0 0.000 1.000 best pat: 00 0.875096 - - best pat: 01 4.04609e-42 chi(nested): 239.994 p-value for nested model: 3.94422e-54 coeffs: 0.763 0.237 ## dscore:: f_4(Base, Fit, Rbase, right2) ## genstat:: f_4(Base, Fit, right1, right2) details: Kenya_PastoralIA Khomani_San.DG 0.000003 0.012505 details: Egyptian_SFI-43 Khomani_San.DG -0.000068 -0.243238 dscore: Khomani_San.DG f4: -0.000014 Z: -0.062373 details: Kenya_PastoralIA Mende.DG -0.000201 -0.765624 details: Egyptian_SFI-43 Mende.DG 0.000039 0.143878 dscore: Mende.DG f4: -0.000144 Z: -0.645279 details: Kenya_PastoralIA Luo.DG -0.000008 -0.030411 details: Egyptian_SFI-43 Luo.DG 0.000243 0.871742 dscore: Luo.DG f4: 0.000052 Z: 0.229442 details: Kenya_PastoralIA Sardinian.DG -0.005287 -12.913069 details: Egyptian_SFI-43 Sardinian.DG 0.016504 37.942027 dscore: Sardinian.DG f4: -0.000112 Z: -0.318291 details: Kenya_PastoralIA Cretan.DG -0.005392 -12.785944 details: Egyptian_SFI-43 Cretan.DG 0.016388 36.395743 dscore: Cretan.DG f4: -0.000220 Z: -0.602859 details: Kenya_PastoralIA Russian.DG -0.004881 -11.651130 details: Egyptian_SFI-43 Russian.DG 0.016141 34.291117 dscore: Russian.DG f4: 0.000111 Z: 0.304127 details: Kenya_PastoralIA Karitiana.DG -0.004078 -9.747003 details: Egyptian_SFI-43 Karitiana.DG 0.012874 28.499115 dscore: Karitiana.DG f4: -0.000053 Z: -0.148626 details: Kenya_PastoralIA Abkhasian.DG -0.005064 -12.157128 details: Egyptian_SFI-43 Abkhasian.DG 0.016040 35.708235 dscore: Abkhasian.DG f4: -0.000053 Z: -0.147411 details: Kenya_PastoralIA Ulchi.DG -0.004105 -10.516101 details: Egyptian_SFI-43 Ulchi.DG 0.012186 28.159150 dscore: Ulchi.DG f4: -0.000237 Z: -0.709394 details: Kenya_PastoralIA Druze.DG -0.005103 -12.655522 details: Egyptian_SFI-43 Druze.DG 0.016000 35.381257 dscore: Druze.DG f4: -0.000092 Z: -0.261987 details: Kenya_PastoralIA Han.DG -0.004108 -10.811640 details: Egyptian_SFI-43 Han.DG 0.012229 29.762016 dscore: Han.DG f4: -0.000229 Z: -0.705689 details: Kenya_PastoralIA Iranian.DG -0.004932 -12.227149 details: Egyptian_SFI-43 Iranian.DG 0.015620 35.624675 dscore: Iranian.DG f4: -0.000052 Z: -0.148425 details: Kenya_PastoralIA Balochi.DG -0.004500 -11.164470 details: Egyptian_SFI-43 Balochi.DG 0.014941 34.505730 dscore: Balochi.DG f4: 0.000117 Z: 0.336074 details: Kenya_PastoralIA Jew_Iraqi.DG -0.005138 -12.263961 details: Egyptian_SFI-43 Jew_Iraqi.DG 0.015956 35.213274 dscore: Jew_Iraqi.DG f4: -0.000129 Z: -0.350537 details: Kenya_PastoralIA Jew_Yemenite.DG -0.004700 -11.066745 details: Egyptian_SFI-43 Jew_Yemenite.DG 0.015347 34.786326 dscore: Jew_Yemenite.DG f4: 0.000060 Z: 0.164374 details: Kenya_PastoralIA Samaritan.DG -0.005274 -11.252945 details: Egyptian_SFI-43 Samaritan.DG 0.015945 28.996562 dscore: Samaritan.DG f4: -0.000236 Z: -0.583003 details: Kenya_PastoralIA Aari.DG -0.001250 -4.386902 details: Egyptian_SFI-43 Aari.DG 0.003447 11.004235 dscore: Aari.DG f4: -0.000135 Z: -0.558285 details: Kenya_PastoralIA Iraqw.DG -0.001731 -5.614270 details: Egyptian_SFI-43 Iraqw.DG 0.004802 14.807272 dscore: Iraqw.DG f4: -0.000180 Z: -0.692372 details: Kenya_PastoralIA Mbuti.DG 0.000157 0.670506 details: Egyptian_SFI-43 Mbuti.DG -0.000192 -0.814834 dscore: Mbuti.DG f4: 0.000074 Z: 0.377217 details: Kenya_PastoralIA Saharawi.DG -0.003939 -10.406720 details: Egyptian_SFI-43 Saharawi.DG 0.012634 30.572485 dscore: Saharawi.DG f4: -0.000004 Z: -0.010908 gendstat: Biaka.DG Khomani_San.DG -0.062 gendstat: Biaka.DG Mende.DG -0.645 gendstat: Biaka.DG Luo.DG 0.229 gendstat: Biaka.DG Sardinian.DG -0.318 gendstat: Biaka.DG Cretan.DG -0.603 gendstat: Biaka.DG Russian.DG 0.304 gendstat: Biaka.DG Karitiana.DG -0.149 gendstat: Biaka.DG Abkhasian.DG -0.147 gendstat: Biaka.DG Ulchi.DG -0.709 gendstat: Biaka.DG Druze.DG -0.262 gendstat: Biaka.DG Han.DG -0.706 gendstat: Biaka.DG Iranian.DG -0.148 gendstat: Biaka.DG Balochi.DG 0.336 gendstat: Biaka.DG Jew_Iraqi.DG -0.351 gendstat: Biaka.DG Jew_Yemenite.DG 0.164 gendstat: Biaka.DG Samaritan.DG -0.583 gendstat: Biaka.DG Aari.DG -0.558 gendstat: Biaka.DG Iraqw.DG -0.692 gendstat: Biaka.DG Mbuti.DG 0.377 gendstat: Biaka.DG Saharawi.DG -0.011 gendstat: Khomani_San.DG Mende.DG -0.544 gendstat: Khomani_San.DG Luo.DG 0.265 gendstat: Khomani_San.DG Sardinian.DG -0.272 gendstat: Khomani_San.DG Cretan.DG -0.555 gendstat: Khomani_San.DG Russian.DG 0.335 gendstat: Khomani_San.DG Karitiana.DG -0.110 gendstat: Khomani_San.DG Abkhasian.DG -0.107 gendstat: Khomani_San.DG Ulchi.DG -0.650 gendstat: Khomani_San.DG Druze.DG -0.213 gendstat: Khomani_San.DG Han.DG -0.636 gendstat: Khomani_San.DG Iranian.DG -0.108 gendstat: Khomani_San.DG Balochi.DG 0.375 gendstat: Khomani_San.DG Jew_Iraqi.DG -0.306 gendstat: Khomani_San.DG Jew_Yemenite.DG 0.198 gendstat: Khomani_San.DG Samaritan.DG -0.542 gendstat: Khomani_San.DG Aari.DG -0.481 gendstat: Khomani_San.DG Iraqw.DG -0.591 gendstat: Khomani_San.DG Mbuti.DG 0.431 gendstat: Khomani_San.DG Saharawi.DG 0.030 gendstat: Mende.DG Luo.DG 0.877 gendstat: Mende.DG Sardinian.DG 0.091 gendstat: Mende.DG Cretan.DG -0.216 gendstat: Mende.DG Russian.DG 0.721 gendstat: Mende.DG Karitiana.DG 0.262 gendstat: Mende.DG Abkhasian.DG 0.258 gendstat: Mende.DG Ulchi.DG -0.279 gendstat: Mende.DG Druze.DG 0.151 gendstat: Mende.DG Han.DG -0.264 gendstat: Mende.DG Iranian.DG 0.276 gendstat: Mende.DG Balochi.DG 0.768 gendstat: Mende.DG Jew_Iraqi.DG 0.043 gendstat: Mende.DG Jew_Yemenite.DG 0.576 gendstat: Mende.DG Samaritan.DG -0.231 gendstat: Mende.DG Aari.DG 0.039 gendstat: Mende.DG Iraqw.DG -0.136 gendstat: Mende.DG Mbuti.DG 1.054 gendstat: Mende.DG Saharawi.DG 0.439 gendstat: Luo.DG Sardinian.DG -0.467 gendstat: Luo.DG Cretan.DG -0.773 gendstat: Luo.DG Russian.DG 0.167 gendstat: Luo.DG Karitiana.DG -0.297 gendstat: Luo.DG Abkhasian.DG -0.292 gendstat: Luo.DG Ulchi.DG -0.861 gendstat: Luo.DG Druze.DG -0.410 gendstat: Luo.DG Han.DG -0.880 gendstat: Luo.DG Iranian.DG -0.299 gendstat: Luo.DG Balochi.DG 0.191 gendstat: Luo.DG Jew_Iraqi.DG -0.495 gendstat: Luo.DG Jew_Yemenite.DG 0.023 gendstat: Luo.DG Samaritan.DG -0.715 gendstat: Luo.DG Aari.DG -0.764 gendstat: Luo.DG Iraqw.DG -0.873 gendstat: Luo.DG Mbuti.DG 0.103 gendstat: Luo.DG Saharawi.DG -0.167 gendstat: Sardinian.DG Cretan.DG -0.503 gendstat: Sardinian.DG Russian.DG 1.023 gendstat: Sardinian.DG Karitiana.DG 0.209 gendstat: Sardinian.DG Abkhasian.DG 0.269 gendstat: Sardinian.DG Ulchi.DG -0.458 gendstat: Sardinian.DG Druze.DG 0.098 gendstat: Sardinian.DG Han.DG -0.451 gendstat: Sardinian.DG Iranian.DG 0.273 gendstat: Sardinian.DG Balochi.DG 0.981 gendstat: Sardinian.DG Jew_Iraqi.DG -0.076 gendstat: Sardinian.DG Jew_Yemenite.DG 0.787 gendstat: Sardinian.DG Samaritan.DG -0.423 gendstat: Sardinian.DG Aari.DG -0.073 gendstat: Sardinian.DG Iraqw.DG -0.232 gendstat: Sardinian.DG Mbuti.DG 0.522 gendstat: Sardinian.DG Saharawi.DG 0.470 gendstat: Cretan.DG Russian.DG 1.464 gendstat: Cretan.DG Karitiana.DG 0.587 gendstat: Cretan.DG Abkhasian.DG 0.709 gendstat: Cretan.DG Ulchi.DG -0.060 gendstat: Cretan.DG Druze.DG 0.571 gendstat: Cretan.DG Han.DG -0.034 gendstat: Cretan.DG Iranian.DG 0.700 gendstat: Cretan.DG Balochi.DG 1.478 gendstat: Cretan.DG Jew_Iraqi.DG 0.387 gendstat: Cretan.DG Jew_Yemenite.DG 1.202 gendstat: Cretan.DG Samaritan.DG -0.052 gendstat: Cretan.DG Aari.DG 0.271 gendstat: Cretan.DG Iraqw.DG 0.133 gendstat: Cretan.DG Mbuti.DG 0.812 gendstat: Cretan.DG Saharawi.DG 0.869 gendstat: Russian.DG Karitiana.DG -0.586 gendstat: Russian.DG Abkhasian.DG -0.718 gendstat: Russian.DG Ulchi.DG -1.283 gendstat: Russian.DG Druze.DG -0.847 gendstat: Russian.DG Han.DG -1.272 gendstat: Russian.DG Iranian.DG -0.679 gendstat: Russian.DG Balochi.DG 0.023 gendstat: Russian.DG Jew_Iraqi.DG -1.055 gendstat: Russian.DG Jew_Yemenite.DG -0.212 gendstat: Russian.DG Samaritan.DG -1.169 gendstat: Russian.DG Aari.DG -0.773 gendstat: Russian.DG Iraqw.DG -0.950 gendstat: Russian.DG Mbuti.DG -0.102 gendstat: Russian.DG Saharawi.DG -0.439 gendstat: Karitiana.DG Abkhasian.DG -0.000 gendstat: Karitiana.DG Ulchi.DG -0.691 gendstat: Karitiana.DG Druze.DG -0.136 gendstat: Karitiana.DG Han.DG -0.713 gendstat: Karitiana.DG Iranian.DG 0.005 gendstat: Karitiana.DG Balochi.DG 0.607 gendstat: Karitiana.DG Jew_Iraqi.DG -0.256 gendstat: Karitiana.DG Jew_Yemenite.DG 0.374 gendstat: Karitiana.DG Samaritan.DG -0.545 gendstat: Karitiana.DG Aari.DG -0.255 gendstat: Karitiana.DG Iraqw.DG -0.396 gendstat: Karitiana.DG Mbuti.DG 0.363 gendstat: Karitiana.DG Saharawi.DG 0.159 gendstat: Abkhasian.DG Ulchi.DG -0.665 gendstat: Abkhasian.DG Druze.DG -0.164 gendstat: Abkhasian.DG Han.DG -0.656 gendstat: Abkhasian.DG Iranian.DG 0.007 gendstat: Abkhasian.DG Balochi.DG 0.708 gendstat: Abkhasian.DG Jew_Iraqi.DG -0.322 gendstat: Abkhasian.DG Jew_Yemenite.DG 0.473 gendstat: Abkhasian.DG Samaritan.DG -0.618 gendstat: Abkhasian.DG Aari.DG -0.264 gendstat: Abkhasian.DG Iraqw.DG -0.419 gendstat: Abkhasian.DG Mbuti.DG 0.356 gendstat: Abkhasian.DG Saharawi.DG 0.193 gendstat: Ulchi.DG Druze.DG 0.534 gendstat: Ulchi.DG Han.DG 0.036 gendstat: Ulchi.DG Iranian.DG 0.678 gendstat: Ulchi.DG Balochi.DG 1.325 gendstat: Ulchi.DG Jew_Iraqi.DG 0.376 gendstat: Ulchi.DG Jew_Yemenite.DG 1.047 gendstat: Ulchi.DG Samaritan.DG 0.003 gendstat: Ulchi.DG Aari.DG 0.334 gendstat: Ulchi.DG Iraqw.DG 0.183 gendstat: Ulchi.DG Mbuti.DG 0.927 gendstat: Ulchi.DG Saharawi.DG 0.810 gendstat: Druze.DG Han.DG -0.520 gendstat: Druze.DG Iranian.DG 0.169 gendstat: Druze.DG Balochi.DG 0.875 gendstat: Druze.DG Jew_Iraqi.DG -0.154 gendstat: Druze.DG Jew_Yemenite.DG 0.639 gendstat: Druze.DG Samaritan.DG -0.494 gendstat: Druze.DG Aari.DG -0.138 gendstat: Druze.DG Iraqw.DG -0.296 gendstat: Druze.DG Mbuti.DG 0.463 gendstat: Druze.DG Saharawi.DG 0.352 gendstat: Han.DG Iranian.DG 0.687 gendstat: Han.DG Balochi.DG 1.380 gendstat: Han.DG Jew_Iraqi.DG 0.368 gendstat: Han.DG Jew_Yemenite.DG 1.074 gendstat: Han.DG Samaritan.DG -0.021 gendstat: Han.DG Aari.DG 0.329 gendstat: Han.DG Iraqw.DG 0.171 gendstat: Han.DG Mbuti.DG 0.953 gendstat: Han.DG Saharawi.DG 0.817 gendstat: Iranian.DG Balochi.DG 0.715 gendstat: Iranian.DG Jew_Iraqi.DG -0.333 gendstat: Iranian.DG Jew_Yemenite.DG 0.471 gendstat: Iranian.DG Samaritan.DG -0.617 gendstat: Iranian.DG Aari.DG -0.270 gendstat: Iranian.DG Iraqw.DG -0.436 gendstat: Iranian.DG Mbuti.DG 0.369 gendstat: Iranian.DG Saharawi.DG 0.194 gendstat: Balochi.DG Jew_Iraqi.DG -1.009 gendstat: Balochi.DG Jew_Yemenite.DG -0.224 gendstat: Balochi.DG Samaritan.DG -1.225 gendstat: Balochi.DG Aari.DG -0.821 gendstat: Balochi.DG Iraqw.DG -0.994 gendstat: Balochi.DG Mbuti.DG -0.125 gendstat: Balochi.DG Saharawi.DG -0.464 gendstat: Jew_Iraqi.DG Jew_Yemenite.DG 0.826 gendstat: Jew_Iraqi.DG Samaritan.DG -0.361 gendstat: Jew_Iraqi.DG Aari.DG -0.019 gendstat: Jew_Iraqi.DG Iraqw.DG -0.167 gendstat: Jew_Iraqi.DG Mbuti.DG 0.556 gendstat: Jew_Iraqi.DG Saharawi.DG 0.494 gendstat: Jew_Yemenite.DG Samaritan.DG -0.966 gendstat: Jew_Yemenite.DG Aari.DG -0.617 gendstat: Jew_Yemenite.DG Iraqw.DG -0.814 gendstat: Jew_Yemenite.DG Mbuti.DG 0.040 gendstat: Jew_Yemenite.DG Saharawi.DG -0.245 gendstat: Samaritan.DG Aari.DG 0.282 gendstat: Samaritan.DG Iraqw.DG 0.159 gendstat: Samaritan.DG Mbuti.DG 0.778 gendstat: Samaritan.DG Saharawi.DG 0.756 gendstat: Aari.DG Iraqw.DG -0.179 gendstat: Aari.DG Mbuti.DG 0.892 gendstat: Aari.DG Saharawi.DG 0.444 gendstat: Iraqw.DG Mbuti.DG 0.964 gendstat: Iraqw.DG Saharawi.DG 0.646 gendstat: Mbuti.DG Saharawi.DG -0.234 left pops: Somali Kenya_PastoralIA Egyptian_SFI-43 right pops: Biaka.DG Khomani_San.DG Mende.DG Luo.DG Sardinian.DG Cretan.DG Russian.DG Karitiana.DG Abkhasian.DG Ulchi.DG Druze.DG Han.DG Iranian.DG Balochi.DG Jew_Iraqi.DG Jew_Yemenite.DG Samaritan.DG Aari.DG Iraqw.DG Mbuti.DG Saharawi.DG 0 Somali 21 1 Kenya_PastoralIA 4 2 Egyptian_SFI-43 1 3 Biaka.DG 2 4 Khomani_San.DG 2 5 Mende.DG 2 6 Luo.DG 2 7 Sardinian.DG 3 8 Cretan.DG 2 9 Russian.DG 2 10 Karitiana.DG 3 11 Abkhasian.DG 2 12 Ulchi.DG 2 13 Druze.DG 2 14 Han.DG 3 15 Iranian.DG 2 16 Balochi.DG 2 17 Jew_Iraqi.DG 2 18 Jew_Yemenite.DG 2 19 Samaritan.DG 1 20 Aari.DG 2 21 Iraqw.DG 2 22 Mbuti.DG 4 23 Saharawi.DG 2 jackknife block size: 0.050 snps: 1143168 indivs: 72 number of blocks for block jackknife: 714 ## ncols: 1143168 coverage: Somali 438427 coverage: Kenya_PastoralIA 661264 coverage: Egyptian_SFI-43 473257 coverage: Biaka.DG 1121248 coverage: Khomani_San.DG 1121214 coverage: Mende.DG 1121272 coverage: Luo.DG 1121311 coverage: Sardinian.DG 1121428 coverage: Cretan.DG 1121014 coverage: Russian.DG 1121371 coverage: Karitiana.DG 1121384 coverage: Abkhasian.DG 1121318 coverage: Ulchi.DG 1121278 coverage: Druze.DG 1121288 coverage: Han.DG 1121405 coverage: Iranian.DG 1121381 coverage: Balochi.DG 1121259 coverage: Jew_Iraqi.DG 1121367 coverage: Jew_Yemenite.DG 1121336 coverage: Samaritan.DG 1115266 coverage: Aari.DG 1121299 coverage: Iraqw.DG 1121349 coverage: Mbuti.DG 1121427 coverage: Saharawi.DG 1121356 Effective number of blocks: 601.833 numsnps used: 181054 codimension 1 f4info: f4rank: 1 dof: 19 chisq: 15.086 tail: 0.717091375 dofdiff: 21 chisqdiff: -15.086 taildiff: 1 B: scale 1.000 Khomani_San.DG -0.012 Mende.DG -0.033 Luo.DG -0.009 Sardinian.DG 1.314 Cretan.DG 1.327 Russian.DG 1.275 Karitiana.DG 0.977 Abkhasian.DG 1.274 Ulchi.DG 0.931 Druze.DG 1.284 Han.DG 0.939 Iranian.DG 1.246 Balochi.DG 1.191 Jew_Iraqi.DG 1.284 Jew_Yemenite.DG 1.227 Samaritan.DG 1.264 Aari.DG 0.241 Iraqw.DG 0.348 Mbuti.DG -0.052 Saharawi.DG 1.002 A: scale 136.897 Kenya_PastoralIA -0.463 Egyptian_SFI-43 1.336 full rank f4info: f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 19 chisqdiff: 15.086 taildiff: 0.717091375 B: scale 278.884 99.935 Khomani_San.DG -0.040 0.002 Mende.DG -0.018 -0.009 Luo.DG 0.035 0.026 Sardinian.DG -1.344 1.300 Cretan.DG -1.283 1.327 Russian.DG -1.230 1.279 Karitiana.DG -0.978 0.991 Abkhasian.DG -1.235 1.281 Ulchi.DG -0.998 0.934 Druze.DG -1.282 1.277 Han.DG -1.015 0.941 Iranian.DG -1.242 1.240 Balochi.DG -1.156 1.190 Jew_Iraqi.DG -1.234 1.288 Jew_Yemenite.DG -1.199 1.228 Samaritan.DG -1.298 1.261 Aari.DG -0.328 0.249 Iraqw.DG -0.413 0.363 Mbuti.DG 0.074 -0.019 Saharawi.DG -1.037 0.998 A: scale 1.414 1.414 Kenya_PastoralIA 1.414 0.000 Egyptian_SFI-43 0.000 1.414 best coefficients: 0.743 0.257 Jackknife mean: 0.742375483 0.257624517 std. errors: 0.013 0.013 error covariance (* 1,000,000) 166 -166 -166 166 summ: Somali 2 0.717091 0.742 0.258 166 -166 166 fixed pat wt dof chisq tail prob 00 0 19 15.086 0.717091 0.743 0.257 01 1 20 278.426 0 1.000 0.000 10 1 20 1829.826 0 0.000 1.000 best pat: 00 0.717091 - - best pat: 01 2.00809e-47 chi(nested): 263.339 p-value for nested model: 3.21107e-59 coeffs: 0.743 0.257 ## dscore:: f_4(Base, Fit, Rbase, right2) ## genstat:: f_4(Base, Fit, right1, right2) details: Kenya_PastoralIA Khomani_San.DG -0.000143 -0.558874 details: Egyptian_SFI-43 Khomani_San.DG 0.000021 0.075417 dscore: Khomani_San.DG f4: -0.000101 Z: -0.492681 details: Kenya_PastoralIA Mende.DG -0.000064 -0.257093 details: Egyptian_SFI-43 Mende.DG -0.000089 -0.341981 dscore: Mende.DG f4: -0.000071 Z: -0.352672 details: Kenya_PastoralIA Luo.DG 0.000125 0.504064 details: Egyptian_SFI-43 Luo.DG 0.000261 0.977499 dscore: Luo.DG f4: 0.000160 Z: 0.824806 details: Kenya_PastoralIA Sardinian.DG -0.004818 -13.378714 details: Egyptian_SFI-43 Sardinian.DG 0.013010 32.950596 dscore: Sardinian.DG f4: -0.000228 Z: -0.786401 details: Kenya_PastoralIA Cretan.DG -0.004601 -12.691090 details: Egyptian_SFI-43 Cretan.DG 0.013277 32.431703 dscore: Cretan.DG f4: 0.000002 Z: 0.006367 details: Kenya_PastoralIA Russian.DG -0.004410 -11.866290 details: Egyptian_SFI-43 Russian.DG 0.012797 30.844482 dscore: Russian.DG f4: 0.000021 Z: 0.068719 details: Kenya_PastoralIA Karitiana.DG -0.003507 -9.245872 details: Egyptian_SFI-43 Karitiana.DG 0.009914 24.029174 dscore: Karitiana.DG f4: -0.000051 Z: -0.170690 details: Kenya_PastoralIA Abkhasian.DG -0.004430 -11.957937 details: Egyptian_SFI-43 Abkhasian.DG 0.012814 31.578316 dscore: Abkhasian.DG f4: 0.000010 Z: 0.032915 details: Kenya_PastoralIA Ulchi.DG -0.003578 -9.608210 details: Egyptian_SFI-43 Ulchi.DG 0.009346 23.932879 dscore: Ulchi.DG f4: -0.000250 Z: -0.856071 details: Kenya_PastoralIA Druze.DG -0.004596 -12.624806 details: Egyptian_SFI-43 Druze.DG 0.012778 30.951786 dscore: Druze.DG f4: -0.000123 Z: -0.419004 details: Kenya_PastoralIA Han.DG -0.003638 -10.436302 details: Egyptian_SFI-43 Han.DG 0.009417 24.536178 dscore: Han.DG f4: -0.000277 Z: -1.007735 details: Kenya_PastoralIA Iranian.DG -0.004452 -12.270555 details: Egyptian_SFI-43 Iranian.DG 0.012412 30.175013 dscore: Iranian.DG f4: -0.000110 Z: -0.379008 details: Kenya_PastoralIA Balochi.DG -0.004146 -11.137437 details: Egyptian_SFI-43 Balochi.DG 0.011907 29.902456 dscore: Balochi.DG f4: -0.000013 Z: -0.043786 details: Kenya_PastoralIA Jew_Iraqi.DG -0.004424 -12.034902 details: Egyptian_SFI-43 Jew_Iraqi.DG 0.012888 31.649836 dscore: Jew_Iraqi.DG f4: 0.000034 Z: 0.111161 details: Kenya_PastoralIA Jew_Yemenite.DG -0.004298 -11.554525 details: Egyptian_SFI-43 Jew_Yemenite.DG 0.012290 31.047307 dscore: Jew_Yemenite.DG f4: -0.000027 Z: -0.091205 details: Kenya_PastoralIA Samaritan.DG -0.004654 -11.013663 details: Egyptian_SFI-43 Samaritan.DG 0.012620 26.117969 dscore: Samaritan.DG f4: -0.000207 Z: -0.602953 details: Kenya_PastoralIA Aari.DG -0.001177 -4.332728 details: Egyptian_SFI-43 Aari.DG 0.002494 8.502934 dscore: Aari.DG f4: -0.000232 Z: -1.060139 details: Kenya_PastoralIA Iraqw.DG -0.001482 -5.026996 details: Egyptian_SFI-43 Iraqw.DG 0.003635 11.660021 dscore: Iraqw.DG f4: -0.000165 Z: -0.706429 details: Kenya_PastoralIA Mbuti.DG 0.000267 1.179932 details: Egyptian_SFI-43 Mbuti.DG -0.000188 -0.793882 dscore: Mbuti.DG f4: 0.000150 Z: 0.831698 details: Kenya_PastoralIA Saharawi.DG -0.003719 -10.866112 details: Egyptian_SFI-43 Saharawi.DG 0.009986 26.449367 dscore: Saharawi.DG f4: -0.000190 Z: -0.690993 gendstat: Biaka.DG Khomani_San.DG -0.493 gendstat: Biaka.DG Mende.DG -0.353 gendstat: Biaka.DG Luo.DG 0.825 gendstat: Biaka.DG Sardinian.DG -0.786 gendstat: Biaka.DG Cretan.DG 0.006 gendstat: Biaka.DG Russian.DG 0.069 gendstat: Biaka.DG Karitiana.DG -0.171 gendstat: Biaka.DG Abkhasian.DG 0.033 gendstat: Biaka.DG Ulchi.DG -0.856 gendstat: Biaka.DG Druze.DG -0.419 gendstat: Biaka.DG Han.DG -1.008 gendstat: Biaka.DG Iranian.DG -0.379 gendstat: Biaka.DG Balochi.DG -0.044 gendstat: Biaka.DG Jew_Iraqi.DG 0.111 gendstat: Biaka.DG Jew_Yemenite.DG -0.091 gendstat: Biaka.DG Samaritan.DG -0.603 gendstat: Biaka.DG Aari.DG -1.060 gendstat: Biaka.DG Iraqw.DG -0.706 gendstat: Biaka.DG Mbuti.DG 0.832 gendstat: Biaka.DG Saharawi.DG -0.691 gendstat: Khomani_San.DG Mende.DG 0.135 gendstat: Khomani_San.DG Luo.DG 1.144 gendstat: Khomani_San.DG Sardinian.DG -0.415 gendstat: Khomani_San.DG Cretan.DG 0.336 gendstat: Khomani_San.DG Russian.DG 0.389 gendstat: Khomani_San.DG Karitiana.DG 0.161 gendstat: Khomani_San.DG Abkhasian.DG 0.360 gendstat: Khomani_San.DG Ulchi.DG -0.503 gendstat: Khomani_San.DG Druze.DG -0.072 gendstat: Khomani_San.DG Han.DG -0.613 gendstat: Khomani_San.DG Iranian.DG -0.031 gendstat: Khomani_San.DG Balochi.DG 0.286 gendstat: Khomani_San.DG Jew_Iraqi.DG 0.427 gendstat: Khomani_San.DG Jew_Yemenite.DG 0.236 gendstat: Khomani_San.DG Samaritan.DG -0.299 gendstat: Khomani_San.DG Aari.DG -0.570 gendstat: Khomani_San.DG Iraqw.DG -0.255 gendstat: Khomani_San.DG Mbuti.DG 1.277 gendstat: Khomani_San.DG Saharawi.DG -0.309 gendstat: Mende.DG Luo.DG 1.175 gendstat: Mende.DG Sardinian.DG -0.538 gendstat: Mende.DG Cretan.DG 0.247 gendstat: Mende.DG Russian.DG 0.311 gendstat: Mende.DG Karitiana.DG 0.066 gendstat: Mende.DG Abkhasian.DG 0.277 gendstat: Mende.DG Ulchi.DG -0.632 gendstat: Mende.DG Druze.DG -0.181 gendstat: Mende.DG Han.DG -0.773 gendstat: Mende.DG Iranian.DG -0.138 gendstat: Mende.DG Balochi.DG 0.190 gendstat: Mende.DG Jew_Iraqi.DG 0.354 gendstat: Mende.DG Jew_Yemenite.DG 0.148 gendstat: Mende.DG Samaritan.DG -0.394 gendstat: Mende.DG Aari.DG -0.743 gendstat: Mende.DG Iraqw.DG -0.412 gendstat: Mende.DG Mbuti.DG 1.156 gendstat: Mende.DG Saharawi.DG -0.442 gendstat: Luo.DG Sardinian.DG -1.340 gendstat: Luo.DG Cretan.DG -0.543 gendstat: Luo.DG Russian.DG -0.479 gendstat: Luo.DG Karitiana.DG -0.741 gendstat: Luo.DG Abkhasian.DG -0.518 gendstat: Luo.DG Ulchi.DG -1.468 gendstat: Luo.DG Druze.DG -0.981 gendstat: Luo.DG Han.DG -1.645 gendstat: Luo.DG Iranian.DG -0.949 gendstat: Luo.DG Balochi.DG -0.594 gendstat: Luo.DG Jew_Iraqi.DG -0.427 gendstat: Luo.DG Jew_Yemenite.DG -0.632 gendstat: Luo.DG Samaritan.DG -1.056 gendstat: Luo.DG Aari.DG -1.813 gendstat: Luo.DG Iraqw.DG -1.466 gendstat: Luo.DG Mbuti.DG -0.050 gendstat: Luo.DG Saharawi.DG -1.299 gendstat: Sardinian.DG Cretan.DG 1.242 gendstat: Sardinian.DG Russian.DG 1.339 gendstat: Sardinian.DG Karitiana.DG 0.764 gendstat: Sardinian.DG Abkhasian.DG 1.184 gendstat: Sardinian.DG Ulchi.DG -0.098 gendstat: Sardinian.DG Druze.DG 0.554 gendstat: Sardinian.DG Han.DG -0.224 gendstat: Sardinian.DG Iranian.DG 0.586 gendstat: Sardinian.DG Balochi.DG 1.029 gendstat: Sardinian.DG Jew_Iraqi.DG 1.332 gendstat: Sardinian.DG Jew_Yemenite.DG 1.069 gendstat: Sardinian.DG Samaritan.DG 0.083 gendstat: Sardinian.DG Aari.DG -0.014 gendstat: Sardinian.DG Iraqw.DG 0.261 gendstat: Sardinian.DG Mbuti.DG 1.312 gendstat: Sardinian.DG Saharawi.DG 0.191 gendstat: Cretan.DG Russian.DG 0.099 gendstat: Cretan.DG Karitiana.DG -0.224 gendstat: Cretan.DG Abkhasian.DG 0.039 gendstat: Cretan.DG Ulchi.DG -1.065 gendstat: Cretan.DG Druze.DG -0.611 gendstat: Cretan.DG Han.DG -1.245 gendstat: Cretan.DG Iranian.DG -0.577 gendstat: Cretan.DG Balochi.DG -0.072 gendstat: Cretan.DG Jew_Iraqi.DG 0.157 gendstat: Cretan.DG Jew_Yemenite.DG -0.143 gendstat: Cretan.DG Samaritan.DG -0.802 gendstat: Cretan.DG Aari.DG -0.906 gendstat: Cretan.DG Iraqw.DG -0.675 gendstat: Cretan.DG Mbuti.DG 0.519 gendstat: Cretan.DG Saharawi.DG -0.948 gendstat: Russian.DG Karitiana.DG -0.303 gendstat: Russian.DG Abkhasian.DG -0.052 gendstat: Russian.DG Ulchi.DG -1.198 gendstat: Russian.DG Druze.DG -0.688 gendstat: Russian.DG Han.DG -1.372 gendstat: Russian.DG Iranian.DG -0.658 gendstat: Russian.DG Balochi.DG -0.160 gendstat: Russian.DG Jew_Iraqi.DG 0.064 gendstat: Russian.DG Jew_Yemenite.DG -0.236 gendstat: Russian.DG Samaritan.DG -0.852 gendstat: Russian.DG Aari.DG -0.987 gendstat: Russian.DG Iraqw.DG -0.731 gendstat: Russian.DG Mbuti.DG 0.457 gendstat: Russian.DG Saharawi.DG -0.984 gendstat: Karitiana.DG Abkhasian.DG 0.252 gendstat: Karitiana.DG Ulchi.DG -0.874 gendstat: Karitiana.DG Druze.DG -0.290 gendstat: Karitiana.DG Han.DG -1.077 gendstat: Karitiana.DG Iranian.DG -0.243 gendstat: Karitiana.DG Balochi.DG 0.156 gendstat: Karitiana.DG Jew_Iraqi.DG 0.352 gendstat: Karitiana.DG Jew_Yemenite.DG 0.096 gendstat: Karitiana.DG Samaritan.DG -0.521 gendstat: Karitiana.DG Aari.DG -0.671 gendstat: Karitiana.DG Iraqw.DG -0.419 gendstat: Karitiana.DG Mbuti.DG 0.700 gendstat: Karitiana.DG Saharawi.DG -0.564 gendstat: Abkhasian.DG Ulchi.DG -1.098 gendstat: Abkhasian.DG Druze.DG -0.641 gendstat: Abkhasian.DG Han.DG -1.268 gendstat: Abkhasian.DG Iranian.DG -0.600 gendstat: Abkhasian.DG Balochi.DG -0.107 gendstat: Abkhasian.DG Jew_Iraqi.DG 0.114 gendstat: Abkhasian.DG Jew_Yemenite.DG -0.169 gendstat: Abkhasian.DG Samaritan.DG -0.798 gendstat: Abkhasian.DG Aari.DG -0.932 gendstat: Abkhasian.DG Iraqw.DG -0.691 gendstat: Abkhasian.DG Mbuti.DG 0.494 gendstat: Abkhasian.DG Saharawi.DG -0.900 gendstat: Ulchi.DG Druze.DG 0.538 gendstat: Ulchi.DG Han.DG -0.143 gendstat: Ulchi.DG Iranian.DG 0.617 gendstat: Ulchi.DG Balochi.DG 1.033 gendstat: Ulchi.DG Jew_Iraqi.DG 1.200 gendstat: Ulchi.DG Jew_Yemenite.DG 0.915 gendstat: Ulchi.DG Samaritan.DG 0.150 gendstat: Ulchi.DG Aari.DG 0.071 gendstat: Ulchi.DG Iraqw.DG 0.321 gendstat: Ulchi.DG Mbuti.DG 1.408 gendstat: Ulchi.DG Saharawi.DG 0.256 gendstat: Druze.DG Han.DG -0.668 gendstat: Druze.DG Iranian.DG 0.063 gendstat: Druze.DG Balochi.DG 0.509 gendstat: Druze.DG Jew_Iraqi.DG 0.751 gendstat: Druze.DG Jew_Yemenite.DG 0.458 gendstat: Druze.DG Samaritan.DG -0.321 gendstat: Druze.DG Aari.DG -0.434 gendstat: Druze.DG Iraqw.DG -0.167 gendstat: Druze.DG Mbuti.DG 0.959 gendstat: Druze.DG Saharawi.DG -0.322 gendstat: Han.DG Iranian.DG 0.772 gendstat: Han.DG Balochi.DG 1.203 gendstat: Han.DG Jew_Iraqi.DG 1.408 gendstat: Han.DG Jew_Yemenite.DG 1.103 gendstat: Han.DG Samaritan.DG 0.252 gendstat: Han.DG Aari.DG 0.184 gendstat: Han.DG Iraqw.DG 0.457 gendstat: Han.DG Mbuti.DG 1.604 gendstat: Han.DG Saharawi.DG 0.384 gendstat: Iranian.DG Balochi.DG 0.474 gendstat: Iranian.DG Jew_Iraqi.DG 0.725 gendstat: Iranian.DG Jew_Yemenite.DG 0.409 gendstat: Iranian.DG Samaritan.DG -0.373 gendstat: Iranian.DG Aari.DG -0.477 gendstat: Iranian.DG Iraqw.DG -0.220 gendstat: Iranian.DG Mbuti.DG 0.935 gendstat: Iranian.DG Saharawi.DG -0.402 gendstat: Balochi.DG Jew_Iraqi.DG 0.222 gendstat: Balochi.DG Jew_Yemenite.DG -0.063 gendstat: Balochi.DG Samaritan.DG -0.726 gendstat: Balochi.DG Aari.DG -0.836 gendstat: Balochi.DG Iraqw.DG -0.590 gendstat: Balochi.DG Mbuti.DG 0.567 gendstat: Balochi.DG Saharawi.DG -0.804 gendstat: Jew_Iraqi.DG Jew_Yemenite.DG -0.306 gendstat: Jew_Iraqi.DG Samaritan.DG -0.935 gendstat: Jew_Iraqi.DG Aari.DG -1.004 gendstat: Jew_Iraqi.DG Iraqw.DG -0.779 gendstat: Jew_Iraqi.DG Mbuti.DG 0.398 gendstat: Jew_Iraqi.DG Saharawi.DG -1.077 gendstat: Jew_Yemenite.DG Samaritan.DG -0.668 gendstat: Jew_Yemenite.DG Aari.DG -0.798 gendstat: Jew_Yemenite.DG Iraqw.DG -0.556 gendstat: Jew_Yemenite.DG Mbuti.DG 0.622 gendstat: Jew_Yemenite.DG Saharawi.DG -0.770 gendstat: Samaritan.DG Aari.DG -0.080 gendstat: Samaritan.DG Iraqw.DG 0.140 gendstat: Samaritan.DG Mbuti.DG 1.060 gendstat: Samaritan.DG Saharawi.DG 0.061 gendstat: Aari.DG Iraqw.DG 0.312 gendstat: Aari.DG Mbuti.DG 1.853 gendstat: Aari.DG Saharawi.DG 0.169 gendstat: Iraqw.DG Mbuti.DG 1.403 gendstat: Iraqw.DG Saharawi.DG -0.112 gendstat: Mbuti.DG Saharawi.DG -1.262
drobbah (10-30-2021)
Ethiopian Somalis
Code:left pops: Esomali Kenya_PastoralIA Egyptian_SFI-43 right pops: Biaka.DG Khomani_San.DG Mende.DG Luo.DG Sardinian.DG Cretan.DG Russian.DG Karitiana.DG Abkhasian.DG Ulchi.DG Druze.DG Han.DG Iranian.DG Balochi.DG Jew_Iraqi.DG Jew_Yemenite.DG Samaritan.DG Aari.DG Iraqw.DG Mbuti.DG Saharawi.DG 0 Esomali 17 1 Kenya_PastoralIA 4 2 Egyptian_SFI-43 1 3 Biaka.DG 2 4 Khomani_San.DG 2 5 Mende.DG 2 6 Luo.DG 2 7 Sardinian.DG 3 8 Cretan.DG 2 9 Russian.DG 2 10 Karitiana.DG 3 11 Abkhasian.DG 2 12 Ulchi.DG 2 13 Druze.DG 2 14 Han.DG 3 15 Iranian.DG 2 16 Balochi.DG 2 17 Jew_Iraqi.DG 2 18 Jew_Yemenite.DG 2 19 Samaritan.DG 1 20 Aari.DG 2 21 Iraqw.DG 2 22 Mbuti.DG 4 23 Saharawi.DG 2 jackknife block size: 0.050 snps: 1143153 indivs: 68 number of blocks for block jackknife: 714 ## ncols: 1143153 coverage: Esomali 437337 coverage: Kenya_PastoralIA 661264 coverage: Egyptian_SFI-43 473257 coverage: Biaka.DG 1121248 coverage: Khomani_San.DG 1121214 coverage: Mende.DG 1121272 coverage: Luo.DG 1121311 coverage: Sardinian.DG 1121428 coverage: Cretan.DG 1121014 coverage: Russian.DG 1121371 coverage: Karitiana.DG 1121384 coverage: Abkhasian.DG 1121318 coverage: Ulchi.DG 1121278 coverage: Druze.DG 1121288 coverage: Han.DG 1121405 coverage: Iranian.DG 1121381 coverage: Balochi.DG 1121259 coverage: Jew_Iraqi.DG 1121367 coverage: Jew_Yemenite.DG 1121336 coverage: Samaritan.DG 1115266 coverage: Aari.DG 1121299 coverage: Iraqw.DG 1121349 coverage: Mbuti.DG 1121427 coverage: Saharawi.DG 1121356 Effective number of blocks: 601.352 numsnps used: 180869 codimension 1 f4info: f4rank: 1 dof: 19 chisq: 13.778 tail: 0.796470537 dofdiff: 21 chisqdiff: -13.778 taildiff: 1 B: scale 1.000 Khomani_San.DG -0.014 Mende.DG -0.023 Luo.DG -0.010 Sardinian.DG 1.317 Cretan.DG 1.329 Russian.DG 1.277 Karitiana.DG 0.972 Abkhasian.DG 1.276 Ulchi.DG 0.925 Druze.DG 1.290 Han.DG 0.933 Iranian.DG 1.244 Balochi.DG 1.188 Jew_Iraqi.DG 1.283 Jew_Yemenite.DG 1.228 Samaritan.DG 1.263 Aari.DG 0.240 Iraqw.DG 0.352 Mbuti.DG -0.055 Saharawi.DG 1.008 A: scale 136.495 Kenya_PastoralIA -0.447 Egyptian_SFI-43 1.342 full rank f4info: f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 19 chisqdiff: 13.778 taildiff: 0.796470537 B: scale 287.091 99.075 Khomani_San.DG -0.059 -0.002 Mende.DG 0.021 0.006 Luo.DG 0.042 0.029 Sardinian.DG -1.329 1.306 Cretan.DG -1.278 1.329 Russian.DG -1.244 1.274 Karitiana.DG -1.004 0.981 Abkhasian.DG -1.245 1.279 Ulchi.DG -1.033 0.922 Druze.DG -1.262 1.285 Han.DG -1.021 0.937 Iranian.DG -1.248 1.239 Balochi.DG -1.161 1.187 Jew_Iraqi.DG -1.249 1.281 Jew_Yemenite.DG -1.185 1.232 Samaritan.DG -1.287 1.265 Aari.DG -0.332 0.247 Iraqw.DG -0.386 0.374 Mbuti.DG 0.045 -0.028 Saharawi.DG -1.000 1.009 A: scale 1.414 1.414 Kenya_PastoralIA 1.414 0.000 Egyptian_SFI-43 0.000 1.414 best coefficients: 0.750 0.250 Jackknife mean: 0.749845321 0.250154679 std. errors: 0.013 0.013 error covariance (* 1,000,000) 159 -159 -159 159 summ: Esomali 2 0.796471 0.750 0.250 159 -159 159 fixed pat wt dof chisq tail prob 00 0 19 13.778 0.796471 0.750 0.250 01 1 20 270.889 0 1.000 0.000 10 1 20 1943.261 0 0.000 1.000 best pat: 00 0.796471 - - best pat: 01 6.80598e-46 chi(nested): 257.111 p-value for nested model: 7.31575e-58 coeffs: 0.750 0.250 ## dscore:: f_4(Base, Fit, Rbase, right2) ## genstat:: f_4(Base, Fit, right1, right2) details: Kenya_PastoralIA Khomani_San.DG -0.000205 -0.805371 details: Egyptian_SFI-43 Khomani_San.DG -0.000017 -0.062882 dscore: Khomani_San.DG f4: -0.000158 Z: -0.773964 details: Kenya_PastoralIA Mende.DG 0.000071 0.283199 details: Egyptian_SFI-43 Mende.DG 0.000060 0.232150 dscore: Mende.DG f4: 0.000069 Z: 0.337475 details: Kenya_PastoralIA Luo.DG 0.000147 0.597091 details: Egyptian_SFI-43 Luo.DG 0.000291 1.082509 dscore: Luo.DG f4: 0.000183 Z: 0.938405 details: Kenya_PastoralIA Sardinian.DG -0.004628 -12.931521 details: Egyptian_SFI-43 Sardinian.DG 0.013182 34.275237 dscore: Sardinian.DG f4: -0.000176 Z: -0.616769 details: Kenya_PastoralIA Cretan.DG -0.004453 -12.347582 details: Egyptian_SFI-43 Cretan.DG 0.013417 33.310433 dscore: Cretan.DG f4: 0.000013 Z: 0.045857 details: Kenya_PastoralIA Russian.DG -0.004332 -11.777512 details: Egyptian_SFI-43 Russian.DG 0.012862 31.392766 dscore: Russian.DG f4: -0.000035 Z: -0.116942 details: Kenya_PastoralIA Karitiana.DG -0.003498 -9.306553 details: Egyptian_SFI-43 Karitiana.DG 0.009902 24.244770 dscore: Karitiana.DG f4: -0.000149 Z: -0.497838 details: Kenya_PastoralIA Abkhasian.DG -0.004336 -11.781120 details: Egyptian_SFI-43 Abkhasian.DG 0.012911 32.306757 dscore: Abkhasian.DG f4: -0.000025 Z: -0.086103 details: Kenya_PastoralIA Ulchi.DG -0.003597 -9.741030 details: Egyptian_SFI-43 Ulchi.DG 0.009306 24.554639 dscore: Ulchi.DG f4: -0.000372 Z: -1.293110 details: Kenya_PastoralIA Druze.DG -0.004395 -12.255677 details: Egyptian_SFI-43 Druze.DG 0.012968 32.075260 dscore: Druze.DG f4: -0.000056 Z: -0.194679 details: Kenya_PastoralIA Han.DG -0.003556 -10.325676 details: Egyptian_SFI-43 Han.DG 0.009462 25.325641 dscore: Han.DG f4: -0.000303 Z: -1.122767 details: Kenya_PastoralIA Iranian.DG -0.004347 -12.217475 details: Egyptian_SFI-43 Iranian.DG 0.012504 31.204248 dscore: Iranian.DG f4: -0.000135 Z: -0.480997 details: Kenya_PastoralIA Balochi.DG -0.004045 -11.054067 details: Egyptian_SFI-43 Balochi.DG 0.011984 30.203908 dscore: Balochi.DG f4: -0.000039 Z: -0.133351 details: Kenya_PastoralIA Jew_Iraqi.DG -0.004352 -12.186384 details: Egyptian_SFI-43 Jew_Iraqi.DG 0.012930 32.411013 dscore: Jew_Iraqi.DG f4: -0.000033 Z: -0.112422 details: Kenya_PastoralIA Jew_Yemenite.DG -0.004127 -11.068052 details: Egyptian_SFI-43 Jew_Yemenite.DG 0.012439 31.629213 dscore: Jew_Yemenite.DG f4: 0.000013 Z: 0.044784 details: Kenya_PastoralIA Samaritan.DG -0.004483 -10.833502 details: Egyptian_SFI-43 Samaritan.DG 0.012768 26.716744 dscore: Samaritan.DG f4: -0.000171 Z: -0.511244 details: Kenya_PastoralIA Aari.DG -0.001156 -4.161349 details: Egyptian_SFI-43 Aari.DG 0.002498 8.564143 dscore: Aari.DG f4: -0.000242 Z: -1.080008 details: Kenya_PastoralIA Iraqw.DG -0.001344 -4.670680 details: Egyptian_SFI-43 Iraqw.DG 0.003772 12.010689 dscore: Iraqw.DG f4: -0.000066 Z: -0.286863 details: Kenya_PastoralIA Mbuti.DG 0.000156 0.686793 details: Egyptian_SFI-43 Mbuti.DG -0.000287 -1.204324 dscore: Mbuti.DG f4: 0.000045 Z: 0.247868 details: Kenya_PastoralIA Saharawi.DG -0.003484 -10.193377 details: Egyptian_SFI-43 Saharawi.DG 0.010185 27.748131 dscore: Saharawi.DG f4: -0.000068 Z: -0.247592 gendstat: Biaka.DG Khomani_San.DG -0.774 gendstat: Biaka.DG Mende.DG 0.337 gendstat: Biaka.DG Luo.DG 0.938 gendstat: Biaka.DG Sardinian.DG -0.617 gendstat: Biaka.DG Cretan.DG 0.046 gendstat: Biaka.DG Russian.DG -0.117 gendstat: Biaka.DG Karitiana.DG -0.498 gendstat: Biaka.DG Abkhasian.DG -0.086 gendstat: Biaka.DG Ulchi.DG -1.293 gendstat: Biaka.DG Druze.DG -0.195 gendstat: Biaka.DG Han.DG -1.123 gendstat: Biaka.DG Iranian.DG -0.481 gendstat: Biaka.DG Balochi.DG -0.133 gendstat: Biaka.DG Jew_Iraqi.DG -0.112 gendstat: Biaka.DG Jew_Yemenite.DG 0.045 gendstat: Biaka.DG Samaritan.DG -0.511 gendstat: Biaka.DG Aari.DG -1.080 gendstat: Biaka.DG Iraqw.DG -0.287 gendstat: Biaka.DG Mbuti.DG 0.248 gendstat: Biaka.DG Saharawi.DG -0.248 gendstat: Khomani_San.DG Mende.DG 1.012 gendstat: Khomani_San.DG Luo.DG 1.509 gendstat: Khomani_San.DG Sardinian.DG -0.060 gendstat: Khomani_San.DG Cretan.DG 0.569 gendstat: Khomani_San.DG Russian.DG 0.401 gendstat: Khomani_San.DG Karitiana.DG 0.031 gendstat: Khomani_San.DG Abkhasian.DG 0.442 gendstat: Khomani_San.DG Ulchi.DG -0.716 gendstat: Khomani_San.DG Druze.DG 0.341 gendstat: Khomani_San.DG Han.DG -0.507 gendstat: Khomani_San.DG Iranian.DG 0.080 gendstat: Khomani_San.DG Balochi.DG 0.398 gendstat: Khomani_San.DG Jew_Iraqi.DG 0.413 gendstat: Khomani_San.DG Jew_Yemenite.DG 0.554 gendstat: Khomani_San.DG Samaritan.DG -0.036 gendstat: Khomani_San.DG Aari.DG -0.361 gendstat: Khomani_San.DG Iraqw.DG 0.372 gendstat: Khomani_San.DG Mbuti.DG 1.030 gendstat: Khomani_San.DG Saharawi.DG 0.318 gendstat: Mende.DG Luo.DG 0.579 gendstat: Mende.DG Sardinian.DG -0.847 gendstat: Mende.DG Cretan.DG -0.187 gendstat: Mende.DG Russian.DG -0.350 gendstat: Mende.DG Karitiana.DG -0.747 gendstat: Mende.DG Abkhasian.DG -0.323 gendstat: Mende.DG Ulchi.DG -1.537 gendstat: Mende.DG Druze.DG -0.433 gendstat: Mende.DG Han.DG -1.377 gendstat: Mende.DG Iranian.DG -0.720 gendstat: Mende.DG Balochi.DG -0.353 gendstat: Mende.DG Jew_Iraqi.DG -0.346 gendstat: Mende.DG Jew_Yemenite.DG -0.185 gendstat: Mende.DG Samaritan.DG -0.708 gendstat: Mende.DG Aari.DG -1.401 gendstat: Mende.DG Iraqw.DG -0.589 gendstat: Mende.DG Mbuti.DG -0.124 gendstat: Mende.DG Saharawi.DG -0.505 gendstat: Luo.DG Sardinian.DG -1.266 gendstat: Luo.DG Cretan.DG -0.590 gendstat: Luo.DG Russian.DG -0.765 gendstat: Luo.DG Karitiana.DG -1.180 gendstat: Luo.DG Abkhasian.DG -0.732 gendstat: Luo.DG Ulchi.DG -2.013 gendstat: Luo.DG Druze.DG -0.842 gendstat: Luo.DG Han.DG -1.859 gendstat: Luo.DG Iranian.DG -1.156 gendstat: Luo.DG Balochi.DG -0.778 gendstat: Luo.DG Jew_Iraqi.DG -0.758 gendstat: Luo.DG Jew_Yemenite.DG -0.573 gendstat: Luo.DG Samaritan.DG -1.055 gendstat: Luo.DG Aari.DG -1.940 gendstat: Luo.DG Iraqw.DG -1.153 gendstat: Luo.DG Mbuti.DG -0.715 gendstat: Luo.DG Saharawi.DG -0.952 gendstat: Sardinian.DG Cretan.DG 1.001 gendstat: Sardinian.DG Russian.DG 0.775 gendstat: Sardinian.DG Karitiana.DG 0.120 gendstat: Sardinian.DG Abkhasian.DG 0.759 gendstat: Sardinian.DG Ulchi.DG -0.851 gendstat: Sardinian.DG Druze.DG 0.641 gendstat: Sardinian.DG Han.DG -0.576 gendstat: Sardinian.DG Iranian.DG 0.206 gendstat: Sardinian.DG Balochi.DG 0.676 gendstat: Sardinian.DG Jew_Iraqi.DG 0.741 gendstat: Sardinian.DG Jew_Yemenite.DG 0.994 gendstat: Sardinian.DG Samaritan.DG 0.022 gendstat: Sardinian.DG Aari.DG -0.267 gendstat: Sardinian.DG Iraqw.DG 0.467 gendstat: Sardinian.DG Mbuti.DG 0.786 gendstat: Sardinian.DG Saharawi.DG 0.548 gendstat: Cretan.DG Russian.DG -0.249 gendstat: Cretan.DG Karitiana.DG -0.679 gendstat: Cretan.DG Abkhasian.DG -0.186 gendstat: Cretan.DG Ulchi.DG -1.601 gendstat: Cretan.DG Druze.DG -0.337 gendstat: Cretan.DG Han.DG -1.405 gendstat: Cretan.DG Iranian.DG -0.751 gendstat: Cretan.DG Balochi.DG -0.251 gendstat: Cretan.DG Jew_Iraqi.DG -0.229 gendstat: Cretan.DG Jew_Yemenite.DG 0.000 gendstat: Cretan.DG Samaritan.DG -0.719 gendstat: Cretan.DG Aari.DG -0.996 gendstat: Cretan.DG Iraqw.DG -0.320 gendstat: Cretan.DG Mbuti.DG 0.111 gendstat: Cretan.DG Saharawi.DG -0.389 gendstat: Russian.DG Karitiana.DG -0.488 gendstat: Russian.DG Abkhasian.DG 0.045 gendstat: Russian.DG Ulchi.DG -1.498 gendstat: Russian.DG Druze.DG -0.103 gendstat: Russian.DG Han.DG -1.259 gendstat: Russian.DG Iranian.DG -0.515 gendstat: Russian.DG Balochi.DG -0.022 gendstat: Russian.DG Jew_Iraqi.DG 0.009 gendstat: Russian.DG Jew_Yemenite.DG 0.234 gendstat: Russian.DG Samaritan.DG -0.516 gendstat: Russian.DG Aari.DG -0.821 gendstat: Russian.DG Iraqw.DG -0.124 gendstat: Russian.DG Mbuti.DG 0.282 gendstat: Russian.DG Saharawi.DG -0.155 gendstat: Karitiana.DG Abkhasian.DG 0.509 gendstat: Karitiana.DG Ulchi.DG -0.971 gendstat: Karitiana.DG Druze.DG 0.379 gendstat: Karitiana.DG Han.DG -0.734 gendstat: Karitiana.DG Iranian.DG 0.057 gendstat: Karitiana.DG Balochi.DG 0.451 gendstat: Karitiana.DG Jew_Iraqi.DG 0.494 gendstat: Karitiana.DG Jew_Yemenite.DG 0.637 gendstat: Karitiana.DG Samaritan.DG -0.076 gendstat: Karitiana.DG Aari.DG -0.350 gendstat: Karitiana.DG Iraqw.DG 0.314 gendstat: Karitiana.DG Mbuti.DG 0.674 gendstat: Karitiana.DG Saharawi.DG 0.330 gendstat: Abkhasian.DG Ulchi.DG -1.456 gendstat: Abkhasian.DG Druze.DG -0.145 gendstat: Abkhasian.DG Han.DG -1.225 gendstat: Abkhasian.DG Iranian.DG -0.551 gendstat: Abkhasian.DG Balochi.DG -0.065 gendstat: Abkhasian.DG Jew_Iraqi.DG -0.035 gendstat: Abkhasian.DG Jew_Yemenite.DG 0.174 gendstat: Abkhasian.DG Samaritan.DG -0.545 gendstat: Abkhasian.DG Aari.DG -0.848 gendstat: Abkhasian.DG Iraqw.DG -0.162 gendstat: Abkhasian.DG Mbuti.DG 0.247 gendstat: Abkhasian.DG Saharawi.DG -0.189 gendstat: Ulchi.DG Druze.DG 1.311 gendstat: Ulchi.DG Han.DG 0.374 gendstat: Ulchi.DG Iranian.DG 1.020 gendstat: Ulchi.DG Balochi.DG 1.459 gendstat: Ulchi.DG Jew_Iraqi.DG 1.447 gendstat: Ulchi.DG Jew_Yemenite.DG 1.544 gendstat: Ulchi.DG Samaritan.DG 0.690 gendstat: Ulchi.DG Aari.DG 0.492 gendstat: Ulchi.DG Iraqw.DG 1.177 gendstat: Ulchi.DG Mbuti.DG 1.457 gendstat: Ulchi.DG Saharawi.DG 1.295 gendstat: Druze.DG Han.DG -1.066 gendstat: Druze.DG Iranian.DG -0.391 gendstat: Druze.DG Balochi.DG 0.078 gendstat: Druze.DG Jew_Iraqi.DG 0.111 gendstat: Druze.DG Jew_Yemenite.DG 0.330 gendstat: Druze.DG Samaritan.DG -0.449 gendstat: Druze.DG Aari.DG -0.755 gendstat: Druze.DG Iraqw.DG -0.039 gendstat: Druze.DG Mbuti.DG 0.358 gendstat: Druze.DG Saharawi.DG -0.056 gendstat: Han.DG Iranian.DG 0.773 gendstat: Han.DG Balochi.DG 1.215 gendstat: Han.DG Jew_Iraqi.DG 1.239 gendstat: Han.DG Jew_Yemenite.DG 1.363 gendstat: Han.DG Samaritan.DG 0.478 gendstat: Han.DG Aari.DG 0.246 gendstat: Han.DG Iraqw.DG 0.995 gendstat: Han.DG Mbuti.DG 1.303 gendstat: Han.DG Saharawi.DG 1.053 gendstat: Iranian.DG Balochi.DG 0.474 gendstat: Iranian.DG Jew_Iraqi.DG 0.527 gendstat: Iranian.DG Jew_Yemenite.DG 0.732 gendstat: Iranian.DG Samaritan.DG -0.139 gendstat: Iranian.DG Aari.DG -0.431 gendstat: Iranian.DG Iraqw.DG 0.292 gendstat: Iranian.DG Mbuti.DG 0.664 gendstat: Iranian.DG Saharawi.DG 0.336 gendstat: Balochi.DG Jew_Iraqi.DG 0.031 gendstat: Balochi.DG Jew_Yemenite.DG 0.232 gendstat: Balochi.DG Samaritan.DG -0.510 gendstat: Balochi.DG Aari.DG -0.788 gendstat: Balochi.DG Iraqw.DG -0.105 gendstat: Balochi.DG Mbuti.DG 0.293 gendstat: Balochi.DG Saharawi.DG -0.129 gendstat: Jew_Iraqi.DG Jew_Yemenite.DG 0.224 gendstat: Jew_Iraqi.DG Samaritan.DG -0.542 gendstat: Jew_Iraqi.DG Aari.DG -0.817 gendstat: Jew_Iraqi.DG Iraqw.DG -0.132 gendstat: Jew_Iraqi.DG Mbuti.DG 0.273 gendstat: Jew_Iraqi.DG Saharawi.DG -0.170 gendstat: Jew_Yemenite.DG Samaritan.DG -0.676 gendstat: Jew_Yemenite.DG Aari.DG -1.004 gendstat: Jew_Yemenite.DG Iraqw.DG -0.318 gendstat: Jew_Yemenite.DG Mbuti.DG 0.110 gendstat: Jew_Yemenite.DG Saharawi.DG -0.372 gendstat: Samaritan.DG Aari.DG -0.235 gendstat: Samaritan.DG Iraqw.DG 0.357 gendstat: Samaritan.DG Mbuti.DG 0.655 gendstat: Samaritan.DG Saharawi.DG 0.386 gendstat: Aari.DG Iraqw.DG 0.824 gendstat: Aari.DG Mbuti.DG 1.373 gendstat: Aari.DG Saharawi.DG 0.713 gendstat: Iraqw.DG Mbuti.DG 0.500 gendstat: Iraqw.DG Saharawi.DG -0.009 gendstat: Mbuti.DG Saharawi.DG -0.418
Rendille
Code:left pops: Rendille1.DG Kenya_PastoralIA Egyptian_SFI-43 right pops: Biaka.DG Khomani_San.DG Mende.DG Luo.DG Sardinian.DG Cretan.DG Russian.DG Karitiana.DG Abkhasian.DG Ulchi.DG Druze.DG Han.DG Iranian.DG Balochi.DG Jew_Iraqi.DG Jew_Yemenite.DG Samaritan.DG Aari.DG Iraqw.DG Mbuti.DG Saharawi.DG 0 Rendille1.DG 1 1 Kenya_PastoralIA 4 2 Egyptian_SFI-43 1 3 Biaka.DG 2 4 Khomani_San.DG 2 5 Mende.DG 2 6 Luo.DG 2 7 Sardinian.DG 3 8 Cretan.DG 2 9 Russian.DG 2 10 Karitiana.DG 3 11 Abkhasian.DG 2 12 Ulchi.DG 2 13 Druze.DG 2 14 Han.DG 3 15 Iranian.DG 2 16 Balochi.DG 2 17 Jew_Iraqi.DG 2 18 Jew_Yemenite.DG 2 19 Samaritan.DG 1 20 Aari.DG 2 21 Iraqw.DG 2 22 Mbuti.DG 4 23 Saharawi.DG 2 jackknife block size: 0.050 snps: 1138625 indivs: 52 number of blocks for block jackknife: 714 ## ncols: 1138625 coverage: Rendille1.DG 1120318 coverage: Kenya_PastoralIA 661264 coverage: Egyptian_SFI-43 473257 coverage: Biaka.DG 1121248 coverage: Khomani_San.DG 1121214 coverage: Mende.DG 1121272 coverage: Luo.DG 1121311 coverage: Sardinian.DG 1121428 coverage: Cretan.DG 1121014 coverage: Russian.DG 1121371 coverage: Karitiana.DG 1121384 coverage: Abkhasian.DG 1121318 coverage: Ulchi.DG 1121278 coverage: Druze.DG 1121288 coverage: Han.DG 1121405 coverage: Iranian.DG 1121381 coverage: Balochi.DG 1121259 coverage: Jew_Iraqi.DG 1121367 coverage: Jew_Yemenite.DG 1121336 coverage: Samaritan.DG 1115266 coverage: Aari.DG 1121299 coverage: Iraqw.DG 1121349 coverage: Mbuti.DG 1121427 coverage: Saharawi.DG 1121356 Effective number of blocks: 614.970 numsnps used: 332022 codimension 1 f4info: f4rank: 1 dof: 19 chisq: 20.679 tail: 0.354812415 dofdiff: 21 chisqdiff: -20.679 taildiff: 1 B: scale 1.000 Khomani_San.DG -0.037 Mende.DG -0.013 Luo.DG -0.008 Sardinian.DG 1.320 Cretan.DG 1.313 Russian.DG 1.267 Karitiana.DG 1.010 Abkhasian.DG 1.287 Ulchi.DG 0.956 Druze.DG 1.279 Han.DG 0.963 Iranian.DG 1.239 Balochi.DG 1.170 Jew_Iraqi.DG 1.268 Jew_Yemenite.DG 1.215 Samaritan.DG 1.268 Aari.DG 0.250 Iraqw.DG 0.357 Mbuti.DG -0.051 Saharawi.DG 0.994 A: scale 102.435 Kenya_PastoralIA -0.273 Egyptian_SFI-43 1.388 full rank f4info: f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 19 chisqdiff: 20.679 taildiff: 0.354812415 B: scale 327.722 73.316 Khomani_San.DG -0.152 -0.039 Mende.DG -0.087 0.002 Luo.DG 0.016 0.026 Sardinian.DG -1.223 1.323 Cretan.DG -1.340 1.303 Russian.DG -1.251 1.270 Karitiana.DG -0.897 1.037 Abkhasian.DG -1.157 1.300 Ulchi.DG -1.012 0.961 Druze.DG -1.263 1.274 Han.DG -1.030 0.961 Iranian.DG -1.253 1.232 Balochi.DG -1.181 1.164 Jew_Iraqi.DG -1.319 1.254 Jew_Yemenite.DG -1.179 1.213 Samaritan.DG -1.345 1.261 Aari.DG -0.361 0.262 Iraqw.DG -0.552 0.352 Mbuti.DG 0.015 -0.028 Saharawi.DG -0.974 1.000 A: scale 1.414 1.414 Kenya_PastoralIA 1.414 0.000 Egyptian_SFI-43 0.000 1.414 best coefficients: 0.836 0.164 Jackknife mean: 0.835329973 0.164670027 std. errors: 0.017 0.017 error covariance (* 1,000,000) 300 -300 -300 300 summ: Rendille1.DG 2 0.354812 0.835 0.165 300 -300 300 fixed pat wt dof chisq tail prob 00 0 19 20.679 0.354812 0.836 0.164 01 1 20 99.370 1.63286e-12 1.000 0.000 10 1 20 1963.488 0 0.000 1.000 best pat: 00 0.354812 - - best pat: 01 1.63286e-12 chi(nested): 78.691 p-value for nested model: 7.26298e-19 coeffs: 0.836 0.164 ## dscore:: f_4(Base, Fit, Rbase, right2) ## genstat:: f_4(Base, Fit, right1, right2) details: Kenya_PastoralIA Khomani_San.DG -0.000464 -1.489773 details: Egyptian_SFI-43 Khomani_San.DG -0.000529 -1.625834 dscore: Khomani_San.DG f4: -0.000475 Z: -1.667873 details: Kenya_PastoralIA Mende.DG -0.000266 -0.844755 details: Egyptian_SFI-43 Mende.DG 0.000034 0.104732 dscore: Mende.DG f4: -0.000217 Z: -0.749458 details: Kenya_PastoralIA Luo.DG 0.000048 0.155361 details: Egyptian_SFI-43 Luo.DG 0.000352 1.072490 dscore: Luo.DG f4: 0.000098 Z: 0.345740 details: Kenya_PastoralIA Sardinian.DG -0.003733 -7.406406 details: Egyptian_SFI-43 Sardinian.DG 0.018050 34.581220 dscore: Sardinian.DG f4: -0.000155 Z: -0.331285 details: Kenya_PastoralIA Cretan.DG -0.004088 -7.831710 details: Egyptian_SFI-43 Cretan.DG 0.017771 33.038470 dscore: Cretan.DG f4: -0.000498 Z: -1.025404 details: Kenya_PastoralIA Russian.DG -0.003818 -7.475379 details: Egyptian_SFI-43 Russian.DG 0.017319 31.853709 dscore: Russian.DG f4: -0.000346 Z: -0.729868 details: Kenya_PastoralIA Karitiana.DG -0.002737 -5.275307 details: Egyptian_SFI-43 Karitiana.DG 0.014149 26.450217 dscore: Karitiana.DG f4: 0.000037 Z: 0.076598 details: Kenya_PastoralIA Abkhasian.DG -0.003530 -6.816441 details: Egyptian_SFI-43 Abkhasian.DG 0.017732 32.565569 dscore: Abkhasian.DG f4: -0.000038 Z: -0.078634 details: Kenya_PastoralIA Ulchi.DG -0.003088 -6.443155 details: Egyptian_SFI-43 Ulchi.DG 0.013112 26.013875 dscore: Ulchi.DG f4: -0.000427 Z: -0.967175 details: Kenya_PastoralIA Druze.DG -0.003854 -7.565978 details: Egyptian_SFI-43 Druze.DG 0.017376 32.559009 dscore: Druze.DG f4: -0.000367 Z: -0.775371 details: Kenya_PastoralIA Han.DG -0.003144 -6.828665 details: Egyptian_SFI-43 Han.DG 0.013107 27.186204 dscore: Han.DG f4: -0.000475 Z: -1.118992 details: Kenya_PastoralIA Iranian.DG -0.003822 -7.656373 details: Egyptian_SFI-43 Iranian.DG 0.016803 33.162608 dscore: Iranian.DG f4: -0.000434 Z: -0.944036 details: Kenya_PastoralIA Balochi.DG -0.003605 -7.188264 details: Egyptian_SFI-43 Balochi.DG 0.015874 30.481051 dscore: Balochi.DG f4: -0.000406 Z: -0.871357 details: Kenya_PastoralIA Jew_Iraqi.DG -0.004025 -7.723621 details: Egyptian_SFI-43 Jew_Iraqi.DG 0.017105 31.035038 dscore: Jew_Iraqi.DG f4: -0.000554 Z: -1.133480 details: Kenya_PastoralIA Jew_Yemenite.DG -0.003597 -6.865634 details: Egyptian_SFI-43 Jew_Yemenite.DG 0.016549 30.562990 dscore: Jew_Yemenite.DG f4: -0.000288 Z: -0.588656 details: Kenya_PastoralIA Samaritan.DG -0.004103 -6.960953 details: Egyptian_SFI-43 Samaritan.DG 0.017198 27.757234 dscore: Samaritan.DG f4: -0.000605 Z: -1.113660 details: Kenya_PastoralIA Aari.DG -0.001102 -3.208223 details: Egyptian_SFI-43 Aari.DG 0.003578 10.023419 dscore: Aari.DG f4: -0.000334 Z: -1.059685 details: Kenya_PastoralIA Iraqw.DG -0.001684 -4.302547 details: Egyptian_SFI-43 Iraqw.DG 0.004798 12.212925 dscore: Iraqw.DG f4: -0.000619 Z: -1.717394 details: Kenya_PastoralIA Mbuti.DG 0.000047 0.167917 details: Egyptian_SFI-43 Mbuti.DG -0.000382 -1.414224 dscore: Mbuti.DG f4: -0.000024 Z: -0.092644 details: Kenya_PastoralIA Saharawi.DG -0.002973 -6.312320 details: Egyptian_SFI-43 Saharawi.DG 0.013639 27.761553 dscore: Saharawi.DG f4: -0.000245 Z: -0.559410 gendstat: Biaka.DG Khomani_San.DG -1.668 gendstat: Biaka.DG Mende.DG -0.749 gendstat: Biaka.DG Luo.DG 0.346 gendstat: Biaka.DG Sardinian.DG -0.331 gendstat: Biaka.DG Cretan.DG -1.025 gendstat: Biaka.DG Russian.DG -0.730 gendstat: Biaka.DG Karitiana.DG 0.077 gendstat: Biaka.DG Abkhasian.DG -0.079 gendstat: Biaka.DG Ulchi.DG -0.967 gendstat: Biaka.DG Druze.DG -0.775 gendstat: Biaka.DG Han.DG -1.119 gendstat: Biaka.DG Iranian.DG -0.944 gendstat: Biaka.DG Balochi.DG -0.871 gendstat: Biaka.DG Jew_Iraqi.DG -1.133 gendstat: Biaka.DG Jew_Yemenite.DG -0.589 gendstat: Biaka.DG Samaritan.DG -1.114 gendstat: Biaka.DG Aari.DG -1.060 gendstat: Biaka.DG Iraqw.DG -1.717 gendstat: Biaka.DG Mbuti.DG -0.093 gendstat: Biaka.DG Saharawi.DG -0.559 gendstat: Khomani_San.DG Mende.DG 0.844 gendstat: Khomani_San.DG Luo.DG 1.790 gendstat: Khomani_San.DG Sardinian.DG 0.694 gendstat: Khomani_San.DG Cretan.DG -0.049 gendstat: Khomani_San.DG Russian.DG 0.272 gendstat: Khomani_San.DG Karitiana.DG 1.083 gendstat: Khomani_San.DG Abkhasian.DG 0.921 gendstat: Khomani_San.DG Ulchi.DG 0.109 gendstat: Khomani_San.DG Druze.DG 0.232 gendstat: Khomani_San.DG Han.DG -0.001 gendstat: Khomani_San.DG Iranian.DG 0.087 gendstat: Khomani_San.DG Balochi.DG 0.150 gendstat: Khomani_San.DG Jew_Iraqi.DG -0.164 gendstat: Khomani_San.DG Jew_Yemenite.DG 0.386 gendstat: Khomani_San.DG Samaritan.DG -0.246 gendstat: Khomani_San.DG Aari.DG 0.431 gendstat: Khomani_San.DG Iraqw.DG -0.402 gendstat: Khomani_San.DG Mbuti.DG 1.738 gendstat: Khomani_San.DG Saharawi.DG 0.523 gendstat: Mende.DG Luo.DG 1.125 gendstat: Mende.DG Sardinian.DG 0.133 gendstat: Mende.DG Cretan.DG -0.597 gendstat: Mende.DG Russian.DG -0.276 gendstat: Mende.DG Karitiana.DG 0.541 gendstat: Mende.DG Abkhasian.DG 0.381 gendstat: Mende.DG Ulchi.DG -0.489 gendstat: Mende.DG Druze.DG -0.325 gendstat: Mende.DG Han.DG -0.616 gendstat: Mende.DG Iranian.DG -0.491 gendstat: Mende.DG Balochi.DG -0.423 gendstat: Mende.DG Jew_Iraqi.DG -0.712 gendstat: Mende.DG Jew_Yemenite.DG -0.151 gendstat: Mende.DG Samaritan.DG -0.747 gendstat: Mende.DG Aari.DG -0.365 gendstat: Mende.DG Iraqw.DG -1.191 gendstat: Mende.DG Mbuti.DG 0.715 gendstat: Mende.DG Saharawi.DG -0.068 gendstat: Luo.DG Sardinian.DG -0.561 gendstat: Luo.DG Cretan.DG -1.293 gendstat: Luo.DG Russian.DG -0.980 gendstat: Luo.DG Karitiana.DG -0.135 gendstat: Luo.DG Abkhasian.DG -0.296 gendstat: Luo.DG Ulchi.DG -1.230 gendstat: Luo.DG Druze.DG -1.031 gendstat: Luo.DG Han.DG -1.398 gendstat: Luo.DG Iranian.DG -1.218 gendstat: Luo.DG Balochi.DG -1.133 gendstat: Luo.DG Jew_Iraqi.DG -1.374 gendstat: Luo.DG Jew_Yemenite.DG -0.828 gendstat: Luo.DG Samaritan.DG -1.371 gendstat: Luo.DG Aari.DG -1.365 gendstat: Luo.DG Iraqw.DG -2.169 gendstat: Luo.DG Mbuti.DG -0.438 gendstat: Luo.DG Saharawi.DG -0.834 gendstat: Sardinian.DG Cretan.DG -1.282 gendstat: Sardinian.DG Russian.DG -0.684 gendstat: Sardinian.DG Karitiana.DG 0.532 gendstat: Sardinian.DG Abkhasian.DG 0.416 gendstat: Sardinian.DG Ulchi.DG -0.829 gendstat: Sardinian.DG Druze.DG -0.743 gendstat: Sardinian.DG Han.DG -0.993 gendstat: Sardinian.DG Iranian.DG -0.963 gendstat: Sardinian.DG Balochi.DG -0.827 gendstat: Sardinian.DG Jew_Iraqi.DG -1.402 gendstat: Sardinian.DG Jew_Yemenite.DG -0.472 gendstat: Sardinian.DG Samaritan.DG -1.267 gendstat: Sardinian.DG Aari.DG -0.446 gendstat: Sardinian.DG Iraqw.DG -1.285 gendstat: Sardinian.DG Mbuti.DG 0.296 gendstat: Sardinian.DG Saharawi.DG -0.302 gendstat: Cretan.DG Russian.DG 0.526 gendstat: Cretan.DG Karitiana.DG 1.476 gendstat: Cretan.DG Abkhasian.DG 1.506 gendstat: Cretan.DG Ulchi.DG 0.206 gendstat: Cretan.DG Druze.DG 0.452 gendstat: Cretan.DG Han.DG 0.070 gendstat: Cretan.DG Iranian.DG 0.222 gendstat: Cretan.DG Balochi.DG 0.304 gendstat: Cretan.DG Jew_Iraqi.DG -0.186 gendstat: Cretan.DG Jew_Yemenite.DG 0.732 gendstat: Cretan.DG Samaritan.DG -0.287 gendstat: Cretan.DG Aari.DG 0.399 gendstat: Cretan.DG Iraqw.DG -0.317 gendstat: Cretan.DG Mbuti.DG 1.029 gendstat: Cretan.DG Saharawi.DG 0.801 gendstat: Russian.DG Karitiana.DG 1.073 gendstat: Russian.DG Abkhasian.DG 1.010 gendstat: Russian.DG Ulchi.DG -0.236 gendstat: Russian.DG Druze.DG -0.068 gendstat: Russian.DG Han.DG -0.383 gendstat: Russian.DG Iranian.DG -0.294 gendstat: Russian.DG Balochi.DG -0.187 gendstat: Russian.DG Jew_Iraqi.DG -0.669 gendstat: Russian.DG Jew_Yemenite.DG 0.193 gendstat: Russian.DG Samaritan.DG -0.680 gendstat: Russian.DG Aari.DG 0.031 gendstat: Russian.DG Iraqw.DG -0.726 gendstat: Russian.DG Mbuti.DG 0.713 gendstat: Russian.DG Saharawi.DG 0.307 gendstat: Karitiana.DG Abkhasian.DG -0.189 gendstat: Karitiana.DG Ulchi.DG -1.336 gendstat: Karitiana.DG Druze.DG -1.049 gendstat: Karitiana.DG Han.DG -1.603 gendstat: Karitiana.DG Iranian.DG -1.291 gendstat: Karitiana.DG Balochi.DG -1.183 gendstat: Karitiana.DG Jew_Iraqi.DG -1.477 gendstat: Karitiana.DG Jew_Yemenite.DG -0.842 gendstat: Karitiana.DG Samaritan.DG -1.454 gendstat: Karitiana.DG Aari.DG -0.854 gendstat: Karitiana.DG Iraqw.DG -1.584 gendstat: Karitiana.DG Mbuti.DG -0.130 gendstat: Karitiana.DG Saharawi.DG -0.722 gendstat: Abkhasian.DG Ulchi.DG -1.104 gendstat: Abkhasian.DG Druze.DG -1.081 gendstat: Abkhasian.DG Han.DG -1.247 gendstat: Abkhasian.DG Iranian.DG -1.250 gendstat: Abkhasian.DG Balochi.DG -1.176 gendstat: Abkhasian.DG Jew_Iraqi.DG -1.633 gendstat: Abkhasian.DG Jew_Yemenite.DG -0.820 gendstat: Abkhasian.DG Samaritan.DG -1.477 gendstat: Abkhasian.DG Aari.DG -0.734 gendstat: Abkhasian.DG Iraqw.DG -1.543 gendstat: Abkhasian.DG Mbuti.DG 0.032 gendstat: Abkhasian.DG Saharawi.DG -0.633 gendstat: Ulchi.DG Druze.DG 0.169 gendstat: Ulchi.DG Han.DG -0.179 gendstat: Ulchi.DG Iranian.DG -0.021 gendstat: Ulchi.DG Balochi.DG 0.063 gendstat: Ulchi.DG Jew_Iraqi.DG -0.348 gendstat: Ulchi.DG Jew_Yemenite.DG 0.397 gendstat: Ulchi.DG Samaritan.DG -0.426 gendstat: Ulchi.DG Aari.DG 0.235 gendstat: Ulchi.DG Iraqw.DG -0.504 gendstat: Ulchi.DG Mbuti.DG 0.944 gendstat: Ulchi.DG Saharawi.DG 0.515 gendstat: Druze.DG Han.DG -0.311 gendstat: Druze.DG Iranian.DG -0.226 gendstat: Druze.DG Balochi.DG -0.121 gendstat: Druze.DG Jew_Iraqi.DG -0.602 gendstat: Druze.DG Jew_Yemenite.DG 0.258 gendstat: Druze.DG Samaritan.DG -0.640 gendstat: Druze.DG Aari.DG 0.082 gendstat: Druze.DG Iraqw.DG -0.672 gendstat: Druze.DG Mbuti.DG 0.763 gendstat: Druze.DG Saharawi.DG 0.384 gendstat: Han.DG Iranian.DG 0.122 gendstat: Han.DG Balochi.DG 0.211 gendstat: Han.DG Jew_Iraqi.DG -0.221 gendstat: Han.DG Jew_Yemenite.DG 0.554 gendstat: Han.DG Samaritan.DG -0.310 gendstat: Han.DG Aari.DG 0.373 gendstat: Han.DG Iraqw.DG -0.394 gendstat: Han.DG Mbuti.DG 1.082 gendstat: Han.DG Saharawi.DG 0.651 gendstat: Iranian.DG Balochi.DG 0.095 gendstat: Iranian.DG Jew_Iraqi.DG -0.389 gendstat: Iranian.DG Jew_Yemenite.DG 0.491 gendstat: Iranian.DG Samaritan.DG -0.452 gendstat: Iranian.DG Aari.DG 0.252 gendstat: Iranian.DG Iraqw.DG -0.498 gendstat: Iranian.DG Mbuti.DG 0.943 gendstat: Iranian.DG Saharawi.DG 0.610 gendstat: Balochi.DG Jew_Iraqi.DG -0.460 gendstat: Balochi.DG Jew_Yemenite.DG 0.376 gendstat: Balochi.DG Samaritan.DG -0.528 gendstat: Balochi.DG Aari.DG 0.180 gendstat: Balochi.DG Iraqw.DG -0.582 gendstat: Balochi.DG Mbuti.DG 0.873 gendstat: Balochi.DG Saharawi.DG 0.489 gendstat: Jew_Iraqi.DG Jew_Yemenite.DG 0.889 gendstat: Jew_Iraqi.DG Samaritan.DG -0.134 gendstat: Jew_Iraqi.DG Aari.DG 0.514 gendstat: Jew_Iraqi.DG Iraqw.DG -0.168 gendstat: Jew_Iraqi.DG Mbuti.DG 1.129 gendstat: Jew_Iraqi.DG Saharawi.DG 0.987 gendstat: Jew_Yemenite.DG Samaritan.DG -0.863 gendstat: Jew_Yemenite.DG Aari.DG -0.111 gendstat: Jew_Yemenite.DG Iraqw.DG -0.897 gendstat: Jew_Yemenite.DG Mbuti.DG 0.576 gendstat: Jew_Yemenite.DG Saharawi.DG 0.134 gendstat: Samaritan.DG Aari.DG 0.577 gendstat: Samaritan.DG Iraqw.DG -0.034 gendstat: Samaritan.DG Mbuti.DG 1.123 gendstat: Samaritan.DG Saharawi.DG 0.942 gendstat: Aari.DG Iraqw.DG -0.915 gendstat: Aari.DG Mbuti.DG 1.043 gendstat: Aari.DG Saharawi.DG 0.232 gendstat: Iraqw.DG Mbuti.DG 1.796 gendstat: Iraqw.DG Saharawi.DG 1.143 gendstat: Mbuti.DG Saharawi.DG -0.531 left pops: Rendille2.DG Kenya_PastoralIA Egyptian_SFI-43 right pops: Biaka.DG Khomani_San.DG Mende.DG Luo.DG Sardinian.DG Cretan.DG Russian.DG Karitiana.DG Abkhasian.DG Ulchi.DG Druze.DG Han.DG Iranian.DG Balochi.DG Jew_Iraqi.DG Jew_Yemenite.DG Samaritan.DG Aari.DG Iraqw.DG Mbuti.DG Saharawi.DG 0 Rendille2.DG 1 1 Kenya_PastoralIA 4 2 Egyptian_SFI-43 1 3 Biaka.DG 2 4 Khomani_San.DG 2 5 Mende.DG 2 6 Luo.DG 2 7 Sardinian.DG 3 8 Cretan.DG 2 9 Russian.DG 2 10 Karitiana.DG 3 11 Abkhasian.DG 2 12 Ulchi.DG 2 13 Druze.DG 2 14 Han.DG 3 15 Iranian.DG 2 16 Balochi.DG 2 17 Jew_Iraqi.DG 2 18 Jew_Yemenite.DG 2 19 Samaritan.DG 1 20 Aari.DG 2 21 Iraqw.DG 2 22 Mbuti.DG 4 23 Saharawi.DG 2 jackknife block size: 0.050 snps: 1138625 indivs: 52 number of blocks for block jackknife: 714 ## ncols: 1138625 coverage: Rendille2.DG 1120058 coverage: Kenya_PastoralIA 661264 coverage: Egyptian_SFI-43 473257 coverage: Biaka.DG 1121248 coverage: Khomani_San.DG 1121214 coverage: Mende.DG 1121272 coverage: Luo.DG 1121311 coverage: Sardinian.DG 1121428 coverage: Cretan.DG 1121014 coverage: Russian.DG 1121371 coverage: Karitiana.DG 1121384 coverage: Abkhasian.DG 1121318 coverage: Ulchi.DG 1121278 coverage: Druze.DG 1121288 coverage: Han.DG 1121405 coverage: Iranian.DG 1121381 coverage: Balochi.DG 1121259 coverage: Jew_Iraqi.DG 1121367 coverage: Jew_Yemenite.DG 1121336 coverage: Samaritan.DG 1115266 coverage: Aari.DG 1121299 coverage: Iraqw.DG 1121349 coverage: Mbuti.DG 1121427 coverage: Saharawi.DG 1121356 Effective number of blocks: 614.972 numsnps used: 331980 codimension 1 f4info: f4rank: 1 dof: 19 chisq: 21.568 tail: 0.306269686 dofdiff: 21 chisqdiff: -21.568 taildiff: 1 B: scale 1.000 Khomani_San.DG -0.029 Mende.DG -0.003 Luo.DG -0.011 Sardinian.DG 1.314 Cretan.DG 1.321 Russian.DG 1.274 Karitiana.DG 1.014 Abkhasian.DG 1.284 Ulchi.DG 0.966 Druze.DG 1.270 Han.DG 0.966 Iranian.DG 1.237 Balochi.DG 1.173 Jew_Iraqi.DG 1.271 Jew_Yemenite.DG 1.201 Samaritan.DG 1.265 Aari.DG 0.251 Iraqw.DG 0.355 Mbuti.DG -0.054 Saharawi.DG 0.995 A: scale 101.074 Kenya_PastoralIA -0.244 Egyptian_SFI-43 1.393 full rank f4info: f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 19 chisqdiff: 21.568 taildiff: 0.306269686 B: scale 386.141 70.956 Khomani_San.DG -0.015 -0.007 Mende.DG 0.035 0.026 Luo.DG 0.007 0.021 Sardinian.DG -1.291 1.308 Cretan.DG -1.249 1.321 Russian.DG -1.160 1.285 Karitiana.DG -0.822 1.047 Abkhasian.DG -1.177 1.292 Ulchi.DG -0.941 0.977 Druze.DG -1.384 1.252 Han.DG -1.039 0.961 Iranian.DG -1.305 1.221 Balochi.DG -1.110 1.177 Jew_Iraqi.DG -1.279 1.264 Jew_Yemenite.DG -1.268 1.196 Samaritan.DG -1.398 1.255 Aari.DG -0.334 0.270 Iraqw.DG -0.577 0.353 Mbuti.DG 0.045 -0.023 Saharawi.DG -0.952 1.003 A: scale 1.414 1.414 Kenya_PastoralIA 1.414 0.000 Egyptian_SFI-43 0.000 1.414 best coefficients: 0.851 0.149 Jackknife mean: 0.850778039 0.149221961 std. errors: 0.017 0.017 error covariance (* 1,000,000) 295 -295 -295 295 summ: Rendille2.DG 2 0.306270 0.851 0.149 295 -295 295 fixed pat wt dof chisq tail prob 00 0 19 21.568 0.30627 0.851 0.149 01 1 20 89.802 8.02638e-11 1.000 0.000 10 1 20 1858.013 0 0.000 1.000 best pat: 00 0.30627 - - best pat: 01 8.02638e-11 chi(nested): 68.234 p-value for nested model: 1.45182e-16 coeffs: 0.851 0.149 ## dscore:: f_4(Base, Fit, Rbase, right2) ## genstat:: f_4(Base, Fit, right1, right2) details: Kenya_PastoralIA Khomani_San.DG -0.000038 -0.130069 details: Egyptian_SFI-43 Khomani_San.DG -0.000103 -0.303021 dscore: Khomani_San.DG f4: -0.000048 Z: -0.175621 details: Kenya_PastoralIA Mende.DG 0.000091 0.294709 details: Egyptian_SFI-43 Mende.DG 0.000373 1.165355 dscore: Mende.DG f4: 0.000133 Z: 0.466013 details: Kenya_PastoralIA Luo.DG 0.000019 0.059745 details: Egyptian_SFI-43 Luo.DG 0.000297 0.868170 dscore: Luo.DG f4: 0.000060 Z: 0.204036 details: Kenya_PastoralIA Sardinian.DG -0.003342 -6.939094 details: Egyptian_SFI-43 Sardinian.DG 0.018430 34.193106 dscore: Sardinian.DG f4: -0.000101 Z: -0.221872 details: Kenya_PastoralIA Cretan.DG -0.003233 -6.727803 details: Egyptian_SFI-43 Cretan.DG 0.018621 34.019563 dscore: Cretan.DG f4: 0.000021 Z: 0.045339 details: Kenya_PastoralIA Russian.DG -0.003004 -6.173202 details: Egyptian_SFI-43 Russian.DG 0.018107 33.005254 dscore: Russian.DG f4: 0.000139 Z: 0.304425 details: Kenya_PastoralIA Karitiana.DG -0.002129 -4.363364 details: Egyptian_SFI-43 Karitiana.DG 0.014749 26.637370 dscore: Karitiana.DG f4: 0.000384 Z: 0.841955 details: Kenya_PastoralIA Abkhasian.DG -0.003049 -6.371773 details: Egyptian_SFI-43 Abkhasian.DG 0.018207 34.845206 dscore: Abkhasian.DG f4: 0.000116 Z: 0.259526 details: Kenya_PastoralIA Ulchi.DG -0.002437 -5.166277 details: Egyptian_SFI-43 Ulchi.DG 0.013765 26.404436 dscore: Ulchi.DG f4: -0.000025 Z: -0.055626 details: Kenya_PastoralIA Druze.DG -0.003584 -7.239644 details: Egyptian_SFI-43 Druze.DG 0.017638 32.091462 dscore: Druze.DG f4: -0.000424 Z: -0.910070 details: Kenya_PastoralIA Han.DG -0.002692 -6.025142 details: Egyptian_SFI-43 Han.DG 0.013540 27.052123 dscore: Han.DG f4: -0.000275 Z: -0.658363 details: Kenya_PastoralIA Iranian.DG -0.003381 -7.060123 details: Egyptian_SFI-43 Iranian.DG 0.017212 32.307101 dscore: Iranian.DG f4: -0.000315 Z: -0.700665 details: Kenya_PastoralIA Balochi.DG -0.002874 -6.139558 details: Egyptian_SFI-43 Balochi.DG 0.016590 31.851121 dscore: Balochi.DG f4: 0.000024 Z: 0.053957 details: Kenya_PastoralIA Jew_Iraqi.DG -0.003311 -6.678145 details: Egyptian_SFI-43 Jew_Iraqi.DG 0.017812 32.590011 dscore: Jew_Iraqi.DG f4: -0.000166 Z: -0.354760 details: Kenya_PastoralIA Jew_Yemenite.DG -0.003283 -6.727759 details: Egyptian_SFI-43 Jew_Yemenite.DG 0.016851 32.898482 dscore: Jew_Yemenite.DG f4: -0.000285 Z: -0.629207 details: Kenya_PastoralIA Samaritan.DG -0.003621 -6.246048 details: Egyptian_SFI-43 Samaritan.DG 0.017685 27.533436 dscore: Samaritan.DG f4: -0.000448 Z: -0.827526 details: Kenya_PastoralIA Aari.DG -0.000866 -2.573071 details: Egyptian_SFI-43 Aari.DG 0.003807 10.459660 dscore: Aari.DG f4: -0.000170 Z: -0.545895 details: Kenya_PastoralIA Iraqw.DG -0.001493 -4.106083 details: Egyptian_SFI-43 Iraqw.DG 0.004980 12.180809 dscore: Iraqw.DG f4: -0.000529 Z: -1.554851 details: Kenya_PastoralIA Mbuti.DG 0.000117 0.440473 details: Egyptian_SFI-43 Mbuti.DG -0.000328 -1.174801 dscore: Mbuti.DG f4: 0.000051 Z: 0.206557 details: Kenya_PastoralIA Saharawi.DG -0.002465 -5.538360 details: Egyptian_SFI-43 Saharawi.DG 0.014141 28.459852 dscore: Saharawi.DG f4: 0.000008 Z: 0.018250 gendstat: Biaka.DG Khomani_San.DG -0.176 gendstat: Biaka.DG Mende.DG 0.466 gendstat: Biaka.DG Luo.DG 0.204 gendstat: Biaka.DG Sardinian.DG -0.222 gendstat: Biaka.DG Cretan.DG 0.045 gendstat: Biaka.DG Russian.DG 0.304 gendstat: Biaka.DG Karitiana.DG 0.842 gendstat: Biaka.DG Abkhasian.DG 0.260 gendstat: Biaka.DG Ulchi.DG -0.056 gendstat: Biaka.DG Druze.DG -0.910 gendstat: Biaka.DG Han.DG -0.658 gendstat: Biaka.DG Iranian.DG -0.701 gendstat: Biaka.DG Balochi.DG 0.054 gendstat: Biaka.DG Jew_Iraqi.DG -0.355 gendstat: Biaka.DG Jew_Yemenite.DG -0.629 gendstat: Biaka.DG Samaritan.DG -0.828 gendstat: Biaka.DG Aari.DG -0.546 gendstat: Biaka.DG Iraqw.DG -1.555 gendstat: Biaka.DG Mbuti.DG 0.207 gendstat: Biaka.DG Saharawi.DG 0.018 gendstat: Khomani_San.DG Mende.DG 0.585 gendstat: Khomani_San.DG Luo.DG 0.339 gendstat: Khomani_San.DG Sardinian.DG -0.114 gendstat: Khomani_San.DG Cretan.DG 0.146 gendstat: Khomani_San.DG Russian.DG 0.392 gendstat: Khomani_San.DG Karitiana.DG 0.914 gendstat: Khomani_San.DG Abkhasian.DG 0.357 gendstat: Khomani_San.DG Ulchi.DG 0.051 gendstat: Khomani_San.DG Druze.DG -0.787 gendstat: Khomani_San.DG Han.DG -0.517 gendstat: Khomani_San.DG Iranian.DG -0.568 gendstat: Khomani_San.DG Balochi.DG 0.157 gendstat: Khomani_San.DG Jew_Iraqi.DG -0.244 gendstat: Khomani_San.DG Jew_Yemenite.DG -0.508 gendstat: Khomani_San.DG Samaritan.DG -0.729 gendstat: Khomani_San.DG Aari.DG -0.375 gendstat: Khomani_San.DG Iraqw.DG -1.409 gendstat: Khomani_San.DG Mbuti.DG 0.387 gendstat: Khomani_San.DG Saharawi.DG 0.127 gendstat: Mende.DG Luo.DG -0.265 gendstat: Mende.DG Sardinian.DG -0.521 gendstat: Mende.DG Cretan.DG -0.250 gendstat: Mende.DG Russian.DG 0.014 gendstat: Mende.DG Karitiana.DG 0.554 gendstat: Mende.DG Abkhasian.DG -0.039 gendstat: Mende.DG Ulchi.DG -0.365 gendstat: Mende.DG Druze.DG -1.214 gendstat: Mende.DG Han.DG -0.989 gendstat: Mende.DG Iranian.DG -1.011 gendstat: Mende.DG Balochi.DG -0.249 gendstat: Mende.DG Jew_Iraqi.DG -0.647 gendstat: Mende.DG Jew_Yemenite.DG -0.942 gendstat: Mende.DG Samaritan.DG -1.074 gendstat: Mende.DG Aari.DG -0.968 gendstat: Mende.DG Iraqw.DG -2.030 gendstat: Mende.DG Mbuti.DG -0.311 gendstat: Mende.DG Saharawi.DG -0.300 gendstat: Luo.DG Sardinian.DG -0.360 gendstat: Luo.DG Cretan.DG -0.091 gendstat: Luo.DG Russian.DG 0.176 gendstat: Luo.DG Karitiana.DG 0.716 gendstat: Luo.DG Abkhasian.DG 0.128 gendstat: Luo.DG Ulchi.DG -0.200 gendstat: Luo.DG Druze.DG -1.060 gendstat: Luo.DG Han.DG -0.841 gendstat: Luo.DG Iranian.DG -0.851 gendstat: Luo.DG Balochi.DG -0.085 gendstat: Luo.DG Jew_Iraqi.DG -0.488 gendstat: Luo.DG Jew_Yemenite.DG -0.774 gendstat: Luo.DG Samaritan.DG -0.955 gendstat: Luo.DG Aari.DG -0.751 gendstat: Luo.DG Iraqw.DG -1.823 gendstat: Luo.DG Mbuti.DG -0.034 gendstat: Luo.DG Saharawi.DG -0.127 gendstat: Sardinian.DG Cretan.DG 0.455 gendstat: Sardinian.DG Russian.DG 0.879 gendstat: Sardinian.DG Karitiana.DG 1.357 gendstat: Sardinian.DG Abkhasian.DG 0.777 gendstat: Sardinian.DG Ulchi.DG 0.227 gendstat: Sardinian.DG Druze.DG -1.172 gendstat: Sardinian.DG Han.DG -0.539 gendstat: Sardinian.DG Iranian.DG -0.722 gendstat: Sardinian.DG Balochi.DG 0.416 gendstat: Sardinian.DG Jew_Iraqi.DG -0.220 gendstat: Sardinian.DG Jew_Yemenite.DG -0.649 gendstat: Sardinian.DG Samaritan.DG -0.902 gendstat: Sardinian.DG Aari.DG -0.176 gendstat: Sardinian.DG Iraqw.DG -1.105 gendstat: Sardinian.DG Mbuti.DG 0.342 gendstat: Sardinian.DG Saharawi.DG 0.349 gendstat: Cretan.DG Russian.DG 0.406 gendstat: Cretan.DG Karitiana.DG 1.016 gendstat: Cretan.DG Abkhasian.DG 0.330 gendstat: Cretan.DG Ulchi.DG -0.129 gendstat: Cretan.DG Druze.DG -1.433 gendstat: Cretan.DG Han.DG -0.915 gendstat: Cretan.DG Iranian.DG -1.081 gendstat: Cretan.DG Balochi.DG 0.010 gendstat: Cretan.DG Jew_Iraqi.DG -0.593 gendstat: Cretan.DG Jew_Yemenite.DG -0.994 gendstat: Cretan.DG Samaritan.DG -1.166 gendstat: Cretan.DG Aari.DG -0.481 gendstat: Cretan.DG Iraqw.DG -1.379 gendstat: Cretan.DG Mbuti.DG 0.068 gendstat: Cretan.DG Saharawi.DG -0.039 gendstat: Russian.DG Karitiana.DG 0.692 gendstat: Russian.DG Abkhasian.DG -0.081 gendstat: Russian.DG Ulchi.DG -0.470 gendstat: Russian.DG Druze.DG -1.853 gendstat: Russian.DG Han.DG -1.221 gendstat: Russian.DG Iranian.DG -1.520 gendstat: Russian.DG Balochi.DG -0.373 gendstat: Russian.DG Jew_Iraqi.DG -1.025 gendstat: Russian.DG Jew_Yemenite.DG -1.389 gendstat: Russian.DG Samaritan.DG -1.497 gendstat: Russian.DG Aari.DG -0.781 gendstat: Russian.DG Iraqw.DG -1.710 gendstat: Russian.DG Mbuti.DG -0.200 gendstat: Russian.DG Saharawi.DG -0.403 gendstat: Karitiana.DG Abkhasian.DG -0.774 gendstat: Karitiana.DG Ulchi.DG -1.209 gendstat: Karitiana.DG Druze.DG -2.134 gendstat: Karitiana.DG Han.DG -2.060 gendstat: Karitiana.DG Iranian.DG -1.938 gendstat: Karitiana.DG Balochi.DG -1.005 gendstat: Karitiana.DG Jew_Iraqi.DG -1.467 gendstat: Karitiana.DG Jew_Yemenite.DG -1.792 gendstat: Karitiana.DG Samaritan.DG -1.827 gendstat: Karitiana.DG Aari.DG -1.382 gendstat: Karitiana.DG Iraqw.DG -2.178 gendstat: Karitiana.DG Mbuti.DG -0.744 gendstat: Karitiana.DG Saharawi.DG -0.967 gendstat: Abkhasian.DG Ulchi.DG -0.412 gendstat: Abkhasian.DG Druze.DG -1.796 gendstat: Abkhasian.DG Han.DG -1.202 gendstat: Abkhasian.DG Iranian.DG -1.473 gendstat: Abkhasian.DG Balochi.DG -0.304 gendstat: Abkhasian.DG Jew_Iraqi.DG -0.936 gendstat: Abkhasian.DG Jew_Yemenite.DG -1.353 gendstat: Abkhasian.DG Samaritan.DG -1.418 gendstat: Abkhasian.DG Aari.DG -0.732 gendstat: Abkhasian.DG Iraqw.DG -1.703 gendstat: Abkhasian.DG Mbuti.DG -0.151 gendstat: Abkhasian.DG Saharawi.DG -0.329 gendstat: Ulchi.DG Druze.DG -1.116 gendstat: Ulchi.DG Han.DG -0.925 gendstat: Ulchi.DG Iranian.DG -0.814 gendstat: Ulchi.DG Balochi.DG 0.142 gendstat: Ulchi.DG Jew_Iraqi.DG -0.397 gendstat: Ulchi.DG Jew_Yemenite.DG -0.731 gendstat: Ulchi.DG Samaritan.DG -0.927 gendstat: Ulchi.DG Aari.DG -0.372 gendstat: Ulchi.DG Iraqw.DG -1.256 gendstat: Ulchi.DG Mbuti.DG 0.176 gendstat: Ulchi.DG Saharawi.DG 0.087 gendstat: Druze.DG Han.DG 0.421 gendstat: Druze.DG Iranian.DG 0.346 gendstat: Druze.DG Balochi.DG 1.348 gendstat: Druze.DG Jew_Iraqi.DG 0.822 gendstat: Druze.DG Jew_Yemenite.DG 0.453 gendstat: Druze.DG Samaritan.DG -0.060 gendstat: Druze.DG Aari.DG 0.619 gendstat: Druze.DG Iraqw.DG -0.260 gendstat: Druze.DG Mbuti.DG 1.037 gendstat: Druze.DG Saharawi.DG 1.285 gendstat: Han.DG Iranian.DG -0.120 gendstat: Han.DG Balochi.DG 0.931 gendstat: Han.DG Jew_Iraqi.DG 0.319 gendstat: Han.DG Jew_Yemenite.DG -0.031 gendstat: Han.DG Samaritan.DG -0.401 gendstat: Han.DG Aari.DG 0.285 gendstat: Han.DG Iraqw.DG -0.663 gendstat: Han.DG Mbuti.DG 0.804 gendstat: Han.DG Saharawi.DG 0.795 gendstat: Iranian.DG Balochi.DG 1.120 gendstat: Iranian.DG Jew_Iraqi.DG 0.484 gendstat: Iranian.DG Jew_Yemenite.DG 0.097 gendstat: Iranian.DG Samaritan.DG -0.336 gendstat: Iranian.DG Aari.DG 0.353 gendstat: Iranian.DG Iraqw.DG -0.536 gendstat: Iranian.DG Mbuti.DG 0.834 gendstat: Iranian.DG Saharawi.DG 1.039 gendstat: Balochi.DG Jew_Iraqi.DG -0.606 gendstat: Balochi.DG Jew_Yemenite.DG -0.968 gendstat: Balochi.DG Samaritan.DG -1.160 gendstat: Balochi.DG Aari.DG -0.492 gendstat: Balochi.DG Iraqw.DG -1.416 gendstat: Balochi.DG Mbuti.DG 0.065 gendstat: Balochi.DG Saharawi.DG -0.049 gendstat: Jew_Iraqi.DG Jew_Yemenite.DG -0.391 gendstat: Jew_Iraqi.DG Samaritan.DG -0.696 gendstat: Jew_Iraqi.DG Aari.DG -0.010 gendstat: Jew_Iraqi.DG Iraqw.DG -0.895 gendstat: Jew_Iraqi.DG Mbuti.DG 0.469 gendstat: Jew_Iraqi.DG Saharawi.DG 0.511 gendstat: Jew_Yemenite.DG Samaritan.DG -0.403 gendstat: Jew_Yemenite.DG Aari.DG 0.290 gendstat: Jew_Yemenite.DG Iraqw.DG -0.632 gendstat: Jew_Yemenite.DG Mbuti.DG 0.761 gendstat: Jew_Yemenite.DG Saharawi.DG 0.905 gendstat: Samaritan.DG Aari.DG 0.580 gendstat: Samaritan.DG Iraqw.DG -0.169 gendstat: Samaritan.DG Mbuti.DG 0.943 gendstat: Samaritan.DG Saharawi.DG 1.096 gendstat: Aari.DG Iraqw.DG -1.140 gendstat: Aari.DG Mbuti.DG 0.750 gendstat: Aari.DG Saharawi.DG 0.479 gendstat: Iraqw.DG Mbuti.DG 1.837 gendstat: Iraqw.DG Saharawi.DG 1.449 gendstat: Mbuti.DG Saharawi.DG -0.105
drobbah (10-30-2021)
Does that mean we also have Anatolian Barcin ancestry?
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