BAM Files is Available
A dynamic 6,000-year genetic history of Eurasia's Eastern Steppe
https://www.ebi.ac.uk/ena/browser/view/PRJEB35748
BAM Files is Available
A dynamic 6,000-year genetic history of Eurasia's Eastern Steppe
https://www.ebi.ac.uk/ena/browser/view/PRJEB35748
Agamemnon (10-23-2020), Alkaevli (10-25-2020), Angoliga (10-27-2020), Awale (10-28-2020), dosas (10-23-2020), evon (10-23-2020), G-Man (10-23-2020), grumpydaddybear (10-23-2020), hartaisarlag (10-23-2020), Jatt1 (10-25-2020), Kopfjäger (10-27-2020), Norfern-Ostrobothnian (10-23-2020), parasar (10-23-2020), Pribislav (10-23-2020), RCO (10-23-2020), ThaYamamoto (10-23-2020), Zelto (10-23-2020)
Genetic changes.png
From the supplementary.
David Bush (10-23-2020)
Very good ! What are the Y-DNA SNPs of the Afanasievo's samples ?
J1 FGC5987 to FGC6175 (188 new SNPs)
MDKAs before Colonial Brazil
Y-DNA - Milhazes, Barcelos, Minho, Portugal.
mtDNA - Ilha Terceira, Azores, Portugal
North_Swedish + PT + PT + PT @ 3.96 EUtest 4
Afanasievo
The J1 sample is here - {"study_accession":"PRJEB35748","sample_accession" :"SAMEA6491012","experiment_accession":"ERX3841512 ","run_accession":"ERR3828888","tax_id":"9606","sc ientific_name":"Homo sapiens","fastq_ftp":"ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/008/ERR3828888/ERR3828888.fastq.gz","submitted_ftp":"ftp.sra.ebi. ac.uk/vol1/run/ERR382/ERR3828888/SHT002.A0101.bam","sra_ftp":"ftp.sra.ebi.ac.uk/vol1/err/ERR382/008/ERR3828888"}
The R1b sample is here - {"study_accession":"PRJEB35748","sample_accession" :"SAMEA6491011","experiment_accession":"ERX3841510 ","run_accession":"ERR3828886","tax_id":"9606","sc ientific_name":"Homo sapiens","fastq_ftp":"ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/006/ERR3828886/ERR3828886.fastq.gz","submitted_ftp":"ftp.sra.ebi. ac.uk/vol1/run/ERR382/ERR3828886/SHT001.B0101.bam","sra_ftp":"ftp.sra.ebi.ac.uk/vol1/err/ERR382/006/ERR3828886"}
,
{"study_accession":"PRJEB35748","sample_accession" :"SAMEA6491011","experiment_accession":"ERX3841511 ","run_accession":"ERR3828887","tax_id":"9606","sc ientific_name":"Homo sapiens","fastq_ftp":"ftp.sra.ebi.ac.uk/vol1/fastq/ERR382/007/ERR3828887/ERR3828887.fastq.gz","submitted_ftp":"ftp.sra.ebi. ac.uk/vol1/run/ERR382/ERR3828887/SHT001.B0102.ss.bam","sra_ftp":"ftp.sra.ebi.ac.uk/vol1/err/ERR382/007/ERR3828887"}
J1 FGC5987 to FGC6175 (188 new SNPs)
MDKAs before Colonial Brazil
Y-DNA - Milhazes, Barcelos, Minho, Portugal.
mtDNA - Ilha Terceira, Azores, Portugal
North_Swedish + PT + PT + PT @ 3.96 EUtest 4
David Bush (10-23-2020), grumpydaddybear (10-23-2020), Jatt1 (10-25-2020)
For Example:
BRU001
https://www.yfull.com/tree/J-Y2919/
UGU006
https://www.yfull.com/tree/J-Y2919/
UUS001
https://yfull.com/tree/J-Y15152/
TSB001
https://www.yfull.com/tree/J-L25/
SHT001
is
R1b1a1b1a1-P311 3 READ
Agamemnon (10-23-2020), grumpydaddybear (10-24-2020), Jatt1 (10-25-2020), Kopfjäger (10-27-2020), Megalophias (10-23-2020), parasar (10-24-2020)
SHT002
is
J1a2~-CTS11731
Agamemnon (10-23-2020), grumpydaddybear (10-24-2020), J1 DYS388=13 (10-23-2020), Jatt1 (10-25-2020), Megalophias (10-23-2020), parasar (10-24-2020), RCO (10-23-2020)
Any other downstream SNP ?Originally Posted by David Bush
J1 FGC5987 to FGC6175 (188 new SNPs)
MDKAs before Colonial Brazil
Y-DNA - Milhazes, Barcelos, Minho, Portugal.
mtDNA - Ilha Terceira, Azores, Portugal
North_Swedish + PT + PT + PT @ 3.96 EUtest 4
grumpydaddybear (10-23-2020)
https://www.yfull.com/arch-7.01/tree/J-FGC5447/
1 read
Of course I'm due to lack of time
I analyze quickly
So it is better to wait for the analysis of experienced friends
Last edited by David Bush; 10-23-2020 at 12:23 PM.
Agamemnon (10-23-2020), grumpydaddybear (10-23-2020), Jatt1 (10-25-2020), RCO (10-23-2020)
In the supplementary they showed J1a (J-CTS5368) so he could be Y29696, CTS1026, FGC6064, ZS6599 or L136 ?
J1 FGC5987 to FGC6175 (188 new SNPs)
MDKAs before Colonial Brazil
Y-DNA - Milhazes, Barcelos, Minho, Portugal.
mtDNA - Ilha Terceira, Azores, Portugal
North_Swedish + PT + PT + PT @ 3.96 EUtest 4
David Bush (10-23-2020)
Posting Permissions
Reply With Quote