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Thread: Runs of homozygosity (ROHs)

  1. #1
    Registered Users
    Posts
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    Adal Sultanate

    Runs of homozygosity (ROHs)

    What does it mean when you have a total Mb of 10.20?

    Also it says "your total ROHs Mb account for 00.39 of your total genome" what does that mean?
    DOes that mean I'm ~99.7% heterogeneous? (as in outbred) as well as minuscule homogenous overlap?

    I've just used a tool that said this.

    You can find your Runs of homozyosity on here

    https://www.math.mun.ca/~dapike/FF23utils/roh.php

    If you've done 23&me, you can upload your file here.
    Last edited by Freb; 11-15-2022 at 02:52 AM.

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  3. #2
    Registered Users
    Posts
    1,795
    Sex
    Location
    France
    Ethnicity
    Breton & Maineau
    Nationality
    French
    aDNA Match (1st)
    ITA_Rome_Renaissance:RMPR1224
    aDNA Match (2nd)
    VK2020_DNK_Langeland_VA:VK317
    aDNA Match (3rd)
    CZE_LBA_Knoviz:I13798
    Y-DNA (P)
    R-BY145002 (DF13+)
    mtDNA (M)
    U4c1a

    France France Bretagne
    I had tested this tool.
    This tool is interesting but you cannot simply read the results, you have to interpret them, even translate them.
    First, your % ROH will depend on the DNA test performed.
    The more your file contains tested markers, the higher your ROH rate will be.
    So comparisons of these figures between several people is biased.
    The interest of this tool is to detect inbred segments.
    Unfortunately, the tool only shows the length in Megabases (Mb).
    It would be better to have the length in Cm (centimorgan).
    It is therefore necessary to do the translation in centimorgan.
    With this calculator for example:
    https://dnapainter.com/tools/cme

    Example of the low relevance of the calculation per megabase (Mb):
    I have a homozygous segment of 23.56 Mb on chromosome 1, but this segment is only 3 centimorgan.
    Conversely, my father has a segment of 4.12 Mb, but this segment is 6.9 centimorgan.
    In my case, this means that this part of the chromosome mutates very little and that many people have this segment. Even if "technically" it is an inbred segment, the origin is ancient.
    For my father, it is indeed an inbred segment. The explanation may be found in his genealogy.
    Y haplogroup: R1b: L21 --> DF13 --> BY145002
    The oldest L21 known are I2457 et I2565 from Stonehenge (Beaker Culture, 2400-1900 BC)

    MTDNA: U4c1
    The oldest U4c1 known are "poz224", Yamnaya culture (2882-2698 BC), and 2 Bell-Beaker in Germany (Karsdorf, 2314-2042 BC)

    Paternal MTDNA: K1b2b
    The oldest K1b2 are Eastern European Mesolithic: Kunda Donkalnis5 (Lithuania), 6000 BC and Meso-Ene Lepenski Vir Lepe28 in Serbia, 5900 BC.
    The oldest K1b2b is Alt-3, Corded-Ware Germany (2500 BC)

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  5. #3
    Registered Users
    Posts
    238
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    Adal Sultanate
    Quote Originally Posted by Tolan View Post
    I had tested this tool.
    This tool is interesting but you cannot simply read the results, you have to interpret them, even translate them.
    First, your % ROH will depend on the DNA test performed.
    The more your file contains tested markers, the higher your ROH rate will be.
    So comparisons of these figures between several people is biased.
    The interest of this tool is to detect inbred segments.
    Unfortunately, the tool only shows the length in Megabases (Mb).
    It would be better to have the length in Cm (centimorgan).
    It is therefore necessary to do the translation in centimorgan.
    With this calculator for example:
    https://dnapainter.com/tools/cme

    Example of the low relevance of the calculation per megabase (Mb):
    I have a homozygous segment of 23.56 Mb on chromosome 1, but this segment is only 3 centimorgan.
    Conversely, my father has a segment of 4.12 Mb, but this segment is 6.9 centimorgan.
    In my case, this means that this part of the chromosome mutates very little and that many people have this segment. Even if "technically" it is an inbred segment, the origin is ancient.
    For my father, it is indeed an inbred segment. The explanation may be found in his genealogy.
    This is the latest 23&me update. v6.0 that is. Before the update it was higher. So, I guess it's probably just due to less markers that were tested that gives a higher ROH mb? Odd (as my results have diversified considerably). Probably the next update will lower it a little bit more too...
    Last edited by Freb; 11-16-2022 at 12:20 PM.

  6. #4
    Registered Users
    Posts
    218
    Sex
    Ethnicity
    Bulgarian
    Nationality
    Bulgarian

    Bulgaria
    I played a bit with some results,

    The highest Bulgarian result was :
    Total ROH Mb: 25.84
    Total genome Mb: 2791.73
    The detected ROHs account for 0.926 % of the reported genome.


    A Bulgarian sample that represents the "average" :

     
    ROHs of length at least 200 will be reported.
    No-Call runs of length at least 10 will be reported.
    No-Calls will be treated as homozygous.
    Heterozygous SNPs that are at least 150 SNPs away from the nearest heterozygous SNP will be treated as homozygous.


    Chr 1 has a ROH of length 360 from position 96151539 to position 97611515 ( 1.46 Mb)
    Chr 1 has a ROH of length 206 from position 171019772 to position 171224083 ( 0.20 Mb)
    Chr 2 has a ROH of length 307 from position 99382537 to position 101011877 ( 1.63 Mb)
    Chr 3 has a ROH of length 201 from position 95033388 to position 96492922 ( 1.46 Mb)
    Chr 6 has a ROH of length 268 from position 26430848 to position 27243767 ( 0.81 Mb)
    Chr 6 has a ROH of length 400 from position 28669315 to position 29354809 ( 0.69 Mb)
    Chr 6 has a ROH of length 200 from position 30809864 to position 30933794 ( 0.12 Mb)
    Chr 6 has a ROH of length 441 from position 32965942 to position 33313427 ( 0.35 Mb)
    Chr 6 has a ROH of length 309 from position 65669109 to position 67088132 ( 1.42 Mb)
    Chr 7 has a ROH of length 294 from position 87069880 to position 87573647 ( 0.50 Mb)
    Chr 10 has a ROH of length 229 from position 58291800 to position 59302685 ( 1.01 Mb)
    Chr 10 has a ROH of length 266 from position 95956055 to position 96751270 ( 0.80 Mb)
    Chr 12 has a ROH of length 210 from position 21333745 to position 21490381 ( 0.16 Mb)
    Chr 13 has a ROH of length 284 from position 55254563 to position 57535346 ( 2.28 Mb)
    Chr 13 has a ROH of length 232 from position 95836355 to position 95934705 ( 0.10 Mb)
    Chr 14 has a ROH of length 256 from position 41930837 to position 43140336 ( 1.21 Mb)
    Chr 17 has a ROH of length 230 from position 4739161 to position 5568304 ( 0.83 Mb)
    Chr 21 has a ROH of length 206 from position 29963852 to position 30957972 ( 0.99 Mb)
    Total ROH Mb: 16.02
    Total genome Mb: 2791.73
    The detected ROHs account for 0.574 % of the reported genome.


    .......................

    A North Mexican result , roughly 50% Amerindian/ 50% European :

     
    ROHs of length at least 200 will be reported.
    No-Call runs of length at least 10 will be reported.
    No-Calls will be treated as homozygous.
    Heterozygous SNPs that are at least 150 SNPs away from the nearest heterozygous SNP will be treated as homozygous.
    Chr 0 has a ROH of length 780 from position 0 to position 0 ( 0.00 Mb)
    Chr 2 has a ROH of length 440 from position 47612304 to position 47724722 ( 0.11 Mb)
    Chr 2 has a ROH of length 380 from position 166812164 to position 166915199 ( 0.10 Mb)
    Chr 2 has a ROH of length 561 from position 179246594 to position 179912976 ( 0.67 Mb)
    Chr 2 has a ROH of length 229 from position 205658016 to position 206671667 ( 1.01 Mb)
    Chr 3 has a ROH of length 461 from position 36986932 to position 37092140 ( 0.11 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 5 has a ROH of length 218 from position 113633874 to position 114806927 ( 1.17 Mb)
    Chr 6 has a ROH of length 363 from position 30071330 to position 30178125 ( 0.11 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 6 has a ROH of length 201 from position 112818310 to position 113926484 ( 1.11 Mb)
    Chr 6 has a ROH of length 227 from position 115185422 to position 116721656 ( 1.54 Mb)
    Chr 6 has a ROH of length 263 from position 118323546 to position 119614442 ( 1.29 Mb)
    Chr 6 has a ROH of length 205 from position 120500907 to position 121696786 ( 1.20 Mb)
    Chr 7 has a ROH of length 258 from position 117138367 to position 117199532 ( 0.06 Mb)
    Chr 7 has a ROH of length 275 from position 117199541 to position 117243836 ( 0.04 Mb)
    Chr 10 has a ROH of length 244 from position 19672528 to position 20684673 ( 1.01 Mb)
    Chr 10 has a ROH of length 244 from position 37585841 to position 42830289 ( 5.24 Mb)
    Chr 11 has a ROH of length 313 from position 65560620 to position 67093486 ( 1.53 Mb)
    Chr 11 has a ROH of length 292 from position 118148271 to position 119216555 ( 1.07 Mb)
    Chr 12 has a ROH of length 222 from position 133021634 to position 133820694 ( 0.80 Mb)
    Chr 13 has a ROH of length 480 from position 32906752 to position 32969073 ( 0.06 Mb)
    Chr 14 has a ROH of length 223 from position 23857398 to position 23897088 ( 0.04 Mb)
    Chr 15 has a ROH of length 334 from position 42988004 to position 45028710 ( 2.04 Mb)
    Chr 15 has a ROH of length 232 from position 48740965 to position 48888564 ( 0.15 Mb)
    Chr 16 has a ROH of length 223 from position 75185764 to position 75993762 ( 0.81 Mb)
    Chr 17 has a ROH of length 243 from position 41244017 to position 41341027 ( 0.10 Mb)
    Total ROH Mb: 21.37
    Total genome Mb: 2731.94
    The detected ROHs account for 0.782 % of the reported genome.


    .............

    And an Equadorian, 100% Amerindian :

     
    ROHs of length at least 200 will be reported.
    No-Call runs of length at least 10 will be reported.
    No-Calls will be treated as homozygous.
    Heterozygous SNPs that are at least 150 SNPs away from the nearest heterozygous SNP will be treated as homozygous.
    Chr 0 has a No-Call run of length 244 from position 0 to position 0 ( 0.00 Kb)
    Chr 0 has a No-Call run of length 39 from position 0 to position 0 ( 0.00 Kb)
    Chr 2 has a No-Call run of length 10 from position 47637512 to position 47639588 ( 2.08 Kb)
    Chr 2 has a No-Call run of length 12 from position 47690236 to position 47693836 ( 3.60 Kb)
    Chr 2 has a No-Call run of length 13 from position 47693857 to position 47693948 ( 0.09 Kb)
    Chr 2 has a No-Call run of length 14 from position 47698105 to position 47698160 ( 0.06 Kb)
    Chr 2 has a No-Call run of length 10 from position 47703506 to position 47703547 ( 0.04 Kb)
    Chr 2 has a No-Call run of length 15 from position 48026167 to position 48026417 ( 0.25 Kb)
    Chr 2 has a No-Call run of length 11 from position 48026740 to position 48026937 ( 0.20 Kb)
    Chr 2 has a No-Call run of length 11 from position 48030639 to position 48030706 ( 0.07 Kb)
    Chr 3 has a No-Call run of length 15 from position 37035040 to position 37035108 ( 0.07 Kb)
    Chr 3 has a No-Call run of length 11 from position 38592737 to position 38592912 ( 0.17 Kb)
    Chr 5 has a No-Call run of length 10 from position 112174759 to position 112175213 ( 0.45 Kb)
    Chr 7 has a No-Call run of length 15 from position 117149197 to position 117170972 (21.77 Kb)
    Chr 7 has a No-Call run of length 13 from position 117170984 to position 117171007 ( 0.02 Kb)
    Chr 7 has a No-Call run of length 11 from position 117180210 to position 117180269 ( 0.06 Kb)
    Chr 7 has a No-Call run of length 10 from position 117180363 to position 117180401 ( 0.04 Kb)
    Chr 7 has a No-Call run of length 12 from position 117230480 to position 117232013 ( 1.53 Kb)
    Chr 7 has a No-Call run of length 26 from position 117232086 to position 117232223 ( 0.14 Kb)
    Chr 7 has a No-Call run of length 14 from position 117232266 to position 117232273 ( 0.01 Kb)
    Chr 7 has a No-Call run of length 10 from position 117251676 to position 117251700 ( 0.02 Kb)
    Chr 7 has a No-Call run of length 12 from position 117267592 to position 117267643 ( 0.05 Kb)
    Chr 7 has a No-Call run of length 10 from position 117282538 to position 117282548 ( 0.01 Kb)
    Chr 7 has a No-Call run of length 13 from position 150648739 to position 150648797 ( 0.06 Kb)
    Chr 10 has a No-Call run of length 11 from position 89720709 to position 89720805 ( 0.10 Kb)
    Chr 11 has a No-Call run of length 14 from position 5247872 to position 5248032 ( 0.16 Kb)
    Chr 11 has a No-Call run of length 16 from position 5248154 to position 5248182 ( 0.03 Kb)
    Chr 11 has a No-Call run of length 10 from position 64577180 to position 64577506 ( 0.33 Kb)
    Chr 13 has a No-Call run of length 14 from position 32906752 to position 32906942 ( 0.19 Kb)
    Chr 13 has a No-Call run of length 20 from position 32913119 to position 32913559 ( 0.44 Kb)
    Chr 13 has a No-Call run of length 20 from position 32914693 to position 32914967 ( 0.27 Kb)
    Chr 15 has a No-Call run of length 12 from position 48762860 to position 48764862 ( 2.00 Kb)
    Chr 15 has a No-Call run of length 10 from position 48782204 to position 48786447 ( 4.24 Kb)
    Chr 15 has a No-Call run of length 11 from position 48807626 to position 48812952 ( 5.33 Kb)
    Chr 15 has a No-Call run of length 11 from position 72643577 to position 72645446 ( 1.87 Kb)
    Chr 16 has a No-Call run of length 17 from position 23646781 to position 23647357 ( 0.58 Kb)
    Chr 17 has a No-Call run of length 11 from position 41245033 to position 41245249 ( 0.22 Kb)
    Chr 17 has a No-Call run of length 11 from position 41258495 to position 41267747 ( 9.25 Kb)
    Chr 17 has a No-Call run of length 10 from position 45374812 to position 45374812 ( 0.00 Kb)
    mtDNA has a No-Call run of length 179 from position 56 to position 16482 (16.43 Kb)

    Chr 0 has a ROH of length 266 from position 0 to position 0 ( 0.00 Mb)
    Chr 1 has a ROH of length 218 from position 15651062 to position 16451766 ( 0.80 Mb)
    Chr 1 has a ROH of length 208 from position 32745281 to position 33988036 ( 1.24 Mb)
    Chr 1 has a ROH of length 303 from position 45340703 to position 46923102 ( 1.58 Mb)
    Chr 1 has a ROH of length 211 from position 153514241 to position 154548331 ( 1.03 Mb)
    Chr 1 has a ROH of length 4216 from position 181436883 to position 202419104 (20.98 Mb)
    Chr 1 has a ROH of length 227 from position 202912422 to position 203492986 ( 0.58 Mb)
    Chr 2 has a ROH of length 438 from position 47630253 to position 47724722 ( 0.09 Mb)
    Chr 2 has a ROH of length 334 from position 80735832 to position 82769207 ( 2.03 Mb)
    Chr 2 has a ROH of length 244 from position 96549198 to position 98685684 ( 2.14 Mb)
    Chr 2 has a ROH of length 313 from position 166847834 to position 166904279 ( 0.06 Mb)
    Chr 2 has a ROH of length 267 from position 218807195 to position 219943846 ( 1.14 Mb)
    Chr 2 has a ROH of length 270 from position 234738175 to position 235440860 ( 0.70 Mb)
    Chr 3 has a ROH of length 375 from position 17168021 to position 19224498 ( 2.06 Mb)
    Chr 3 has a ROH of length 228 from position 35313074 to position 36485336 ( 1.17 Mb)
    Chr 3 has a ROH of length 461 from position 36986932 to position 37092140 ( 0.11 Mb)
    Chr 3 has a ROH of length 264 from position 45153318 to position 46279921 ( 1.13 Mb)
    Chr 3 has a ROH of length 492 from position 48626047 to position 51768810 ( 3.14 Mb)
    Chr 3 has a ROH of length 280 from position 82616037 to position 84961960 ( 2.35 Mb)
    Chr 3 has a ROH of length 215 from position 101901465 to position 103155556 ( 1.25 Mb)
    Chr 3 has a ROH of length 418 from position 127693417 to position 129646344 ( 1.95 Mb)
    Chr 3 has a ROH of length 254 from position 135556316 to position 137235241 ( 1.68 Mb)
    Chr 3 has a ROH of length 268 from position 157312557 to position 158812464 ( 1.50 Mb)
    Chr 3 has a ROH of length 496 from position 165117883 to position 167915380 ( 2.80 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 4 has a ROH of length 214 from position 53136123 to position 54542201 ( 1.41 Mb)
    Chr 4 has a ROH of length 341 from position 62865413 to position 64601665 ( 1.74 Mb)
    Chr 4 has a ROH of length 283 from position 72083374 to position 73645351 ( 1.56 Mb)
    Chr 4 has a ROH of length 200 from position 130569024 to position 131509212 ( 0.94 Mb)
    Chr 4 has a ROH of length 759 from position 179936956 to position 182408040 ( 2.47 Mb)
    Chr 5 has a ROH of length 210 from position 8634454 to position 9438406 ( 0.80 Mb)
    Chr 5 has a ROH of length 254 from position 36739499 to position 37280264 ( 0.54 Mb)
    Chr 5 has a ROH of length 247 from position 87087119 to position 88890614 ( 1.80 Mb)
    Chr 5 has a ROH of length 210 from position 92196315 to position 93773340 ( 1.58 Mb)
    Chr 5 has a ROH of length 233 from position 139045055 to position 140371570 ( 1.33 Mb)
    Chr 5 has a ROH of length 1098 from position 163124203 to position 167651381 ( 4.53 Mb)
    Chr 5 has a ROH of length 508 from position 172167974 to position 173642871 ( 1.47 Mb)
    Chr 5 has a ROH of length 277 from position 176243454 to position 176836047 ( 0.59 Mb)
    Chr 6 has a ROH of length 214 from position 11771259 to position 12513226 ( 0.74 Mb)
    Chr 6 has a ROH of length 1037 from position 28999218 to position 29924713 ( 0.93 Mb)
    Chr 6 has a ROH of length 719 from position 30047503 to position 30330341 ( 0.28 Mb)
    Chr 6 has a ROH of length 390 from position 30712327 to position 30932532 ( 0.22 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 6 has a ROH of length 244 from position 31432587 to position 31547460 ( 0.11 Mb)
    Chr 6 has a ROH of length 354 from position 32963784 to position 33121678 ( 0.16 Mb)
    Chr 6 has a ROH of length 217 from position 42739994 to position 43519163 ( 0.78 Mb)
    Chr 6 has a ROH of length 322 from position 48357970 to position 50261878 ( 1.90 Mb)
    Chr 6 has a ROH of length 220 from position 65512193 to position 66696271 ( 1.18 Mb)
    Chr 6 has a ROH of length 214 from position 118372057 to position 119421422 ( 1.05 Mb)
    Chr 7 has a ROH of length 287 from position 73053490 to position 75172226 ( 2.12 Mb)
    Chr 7 has a ROH of length 269 from position 96620591 to position 97929046 ( 1.31 Mb)
    Chr 7 has a ROH of length 260 from position 100013402 to position 100922977 ( 0.91 Mb)
    Chr 7 has a ROH of length 217 from position 113473500 to position 114901579 ( 1.43 Mb)
    Chr 7 has a ROH of length 786 from position 117138367 to position 117406238 ( 0.27 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 7 has a ROH of length 239 from position 136334922 to position 137534627 ( 1.20 Mb)
    Chr 7 has a ROH of length 221 from position 140349421 to position 141209653 ( 0.86 Mb)
    Chr 7 has a ROH of length 210 from position 145728709 to position 146747273 ( 1.02 Mb)
    Chr 7 has a ROH of length 468 from position 149963025 to position 150822192 ( 0.86 Mb)
    Chr 8 has a ROH of length 294 from position 42605081 to position 47760856 ( 5.16 Mb)
    Chr 8 has a ROH of length 225 from position 49859565 to position 51368483 ( 1.51 Mb)
    Chr 8 has a ROH of length 223 from position 75007624 to position 76016702 ( 1.01 Mb)
    Chr 9 has a ROH of length 207 from position 33586236 to position 34708946 ( 1.12 Mb)
    Chr 9 has a ROH of length 216 from position 41122073 to position 70973695 (29.85 Mb)
    Chr 9 has a ROH of length 236 from position 82712307 to position 84170701 ( 1.46 Mb)
    Chr 9 has a ROH of length 221 from position 94561730 to position 96189394 ( 1.63 Mb)
    Chr 10 has a ROH of length 829 from position 8165550 to position 11293778 ( 3.13 Mb)
    Chr 10 has a ROH of length 302 from position 45401601 to position 47620300 ( 2.22 Mb)
    Chr 10 has a ROH of length 333 from position 47671856 to position 50151649 ( 2.48 Mb)
    Chr 10 has a ROH of length 225 from position 75708906 to position 77046691 ( 1.34 Mb)
    Chr 10 has a ROH of length 235 from position 101325915 to position 102207522 ( 0.88 Mb)
    Chr 11 has a ROH of length 384 from position 65753304 to position 67492084 ( 1.74 Mb)
    Chr 11 has a ROH of length 234 from position 71221331 to position 72306935 ( 1.09 Mb)
    Chr 11 has a ROH of length 286 from position 84380034 to position 86103702 ( 1.72 Mb)
    Chr 11 has a ROH of length 204 from position 108031657 to position 108192148 ( 0.16 Mb)
    Chr 12 has a ROH of length 233 from position 43399288 to position 44919685 ( 1.52 Mb)
    Chr 13 has a ROH of length 480 from position 32906752 to position 32969073 ( 0.06 Mb)
    Chr 13 has a ROH of length 241 from position 96180914 to position 97885144 ( 1.70 Mb)
    Chr 14 has a ROH of length 373 from position 23812590 to position 24115473 ( 0.30 Mb)
    Chr 14 has a ROH of length 1677 from position 61804919 to position 70375623 ( 8.57 Mb)
    Chr 15 has a ROH of length 433 from position 74352941 to position 76869161 ( 2.52 Mb)
    Chr 16 has a ROH of length 213 from position 47436017 to position 48995896 ( 1.56 Mb)
    Chr 17 has a ROH of length 242 from position 41244017 to position 41325764 ( 0.08 Mb)
    Chr 18 has a ROH of length 249 from position 24291265 to position 24987480 ( 0.70 Mb)
    Chr 19 has a ROH of length 260 from position 40123536 to position 41223203 ( 1.10 Mb)
    Chr 20 has a ROH of length 277 from position 24437203 to position 29507543 ( 5.07 Mb)
    Total ROH Mb: 169.28
    Total genome Mb: 2731.94
    The detected ROHs account for 6.196 % of the reported genome.


    All samples FTDNA of various vintages.

    Some useful read :

    https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2981575/

  7. The Following User Says Thank You to td120 For This Useful Post:

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  8. #5
    Registered Users
    Posts
    238
    Sex

    Adal Sultanate
    Quote Originally Posted by td120 View Post
    I played a bit with some results,

    The highest Bulgarian result was :
    Total ROH Mb: 25.84
    Total genome Mb: 2791.73
    The detected ROHs account for 0.926 % of the reported genome.


    A Bulgarian sample that represents the "average" :

     
    ROHs of length at least 200 will be reported.
    No-Call runs of length at least 10 will be reported.
    No-Calls will be treated as homozygous.
    Heterozygous SNPs that are at least 150 SNPs away from the nearest heterozygous SNP will be treated as homozygous.


    Chr 1 has a ROH of length 360 from position 96151539 to position 97611515 ( 1.46 Mb)
    Chr 1 has a ROH of length 206 from position 171019772 to position 171224083 ( 0.20 Mb)
    Chr 2 has a ROH of length 307 from position 99382537 to position 101011877 ( 1.63 Mb)
    Chr 3 has a ROH of length 201 from position 95033388 to position 96492922 ( 1.46 Mb)
    Chr 6 has a ROH of length 268 from position 26430848 to position 27243767 ( 0.81 Mb)
    Chr 6 has a ROH of length 400 from position 28669315 to position 29354809 ( 0.69 Mb)
    Chr 6 has a ROH of length 200 from position 30809864 to position 30933794 ( 0.12 Mb)
    Chr 6 has a ROH of length 441 from position 32965942 to position 33313427 ( 0.35 Mb)
    Chr 6 has a ROH of length 309 from position 65669109 to position 67088132 ( 1.42 Mb)
    Chr 7 has a ROH of length 294 from position 87069880 to position 87573647 ( 0.50 Mb)
    Chr 10 has a ROH of length 229 from position 58291800 to position 59302685 ( 1.01 Mb)
    Chr 10 has a ROH of length 266 from position 95956055 to position 96751270 ( 0.80 Mb)
    Chr 12 has a ROH of length 210 from position 21333745 to position 21490381 ( 0.16 Mb)
    Chr 13 has a ROH of length 284 from position 55254563 to position 57535346 ( 2.28 Mb)
    Chr 13 has a ROH of length 232 from position 95836355 to position 95934705 ( 0.10 Mb)
    Chr 14 has a ROH of length 256 from position 41930837 to position 43140336 ( 1.21 Mb)
    Chr 17 has a ROH of length 230 from position 4739161 to position 5568304 ( 0.83 Mb)
    Chr 21 has a ROH of length 206 from position 29963852 to position 30957972 ( 0.99 Mb)
    Total ROH Mb: 16.02
    Total genome Mb: 2791.73
    The detected ROHs account for 0.574 % of the reported genome.


    .......................

    A North Mexican result , roughly 50% Amerindian/ 50% European :

     
    ROHs of length at least 200 will be reported.
    No-Call runs of length at least 10 will be reported.
    No-Calls will be treated as homozygous.
    Heterozygous SNPs that are at least 150 SNPs away from the nearest heterozygous SNP will be treated as homozygous.
    Chr 0 has a ROH of length 780 from position 0 to position 0 ( 0.00 Mb)
    Chr 2 has a ROH of length 440 from position 47612304 to position 47724722 ( 0.11 Mb)
    Chr 2 has a ROH of length 380 from position 166812164 to position 166915199 ( 0.10 Mb)
    Chr 2 has a ROH of length 561 from position 179246594 to position 179912976 ( 0.67 Mb)
    Chr 2 has a ROH of length 229 from position 205658016 to position 206671667 ( 1.01 Mb)
    Chr 3 has a ROH of length 461 from position 36986932 to position 37092140 ( 0.11 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 5 has a ROH of length 218 from position 113633874 to position 114806927 ( 1.17 Mb)
    Chr 6 has a ROH of length 363 from position 30071330 to position 30178125 ( 0.11 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 6 has a ROH of length 201 from position 112818310 to position 113926484 ( 1.11 Mb)
    Chr 6 has a ROH of length 227 from position 115185422 to position 116721656 ( 1.54 Mb)
    Chr 6 has a ROH of length 263 from position 118323546 to position 119614442 ( 1.29 Mb)
    Chr 6 has a ROH of length 205 from position 120500907 to position 121696786 ( 1.20 Mb)
    Chr 7 has a ROH of length 258 from position 117138367 to position 117199532 ( 0.06 Mb)
    Chr 7 has a ROH of length 275 from position 117199541 to position 117243836 ( 0.04 Mb)
    Chr 10 has a ROH of length 244 from position 19672528 to position 20684673 ( 1.01 Mb)
    Chr 10 has a ROH of length 244 from position 37585841 to position 42830289 ( 5.24 Mb)
    Chr 11 has a ROH of length 313 from position 65560620 to position 67093486 ( 1.53 Mb)
    Chr 11 has a ROH of length 292 from position 118148271 to position 119216555 ( 1.07 Mb)
    Chr 12 has a ROH of length 222 from position 133021634 to position 133820694 ( 0.80 Mb)
    Chr 13 has a ROH of length 480 from position 32906752 to position 32969073 ( 0.06 Mb)
    Chr 14 has a ROH of length 223 from position 23857398 to position 23897088 ( 0.04 Mb)
    Chr 15 has a ROH of length 334 from position 42988004 to position 45028710 ( 2.04 Mb)
    Chr 15 has a ROH of length 232 from position 48740965 to position 48888564 ( 0.15 Mb)
    Chr 16 has a ROH of length 223 from position 75185764 to position 75993762 ( 0.81 Mb)
    Chr 17 has a ROH of length 243 from position 41244017 to position 41341027 ( 0.10 Mb)
    Total ROH Mb: 21.37
    Total genome Mb: 2731.94
    The detected ROHs account for 0.782 % of the reported genome.


    .............

    And an Equadorian, 100% Amerindian :

     
    ROHs of length at least 200 will be reported.
    No-Call runs of length at least 10 will be reported.
    No-Calls will be treated as homozygous.
    Heterozygous SNPs that are at least 150 SNPs away from the nearest heterozygous SNP will be treated as homozygous.
    Chr 0 has a No-Call run of length 244 from position 0 to position 0 ( 0.00 Kb)
    Chr 0 has a No-Call run of length 39 from position 0 to position 0 ( 0.00 Kb)
    Chr 2 has a No-Call run of length 10 from position 47637512 to position 47639588 ( 2.08 Kb)
    Chr 2 has a No-Call run of length 12 from position 47690236 to position 47693836 ( 3.60 Kb)
    Chr 2 has a No-Call run of length 13 from position 47693857 to position 47693948 ( 0.09 Kb)
    Chr 2 has a No-Call run of length 14 from position 47698105 to position 47698160 ( 0.06 Kb)
    Chr 2 has a No-Call run of length 10 from position 47703506 to position 47703547 ( 0.04 Kb)
    Chr 2 has a No-Call run of length 15 from position 48026167 to position 48026417 ( 0.25 Kb)
    Chr 2 has a No-Call run of length 11 from position 48026740 to position 48026937 ( 0.20 Kb)
    Chr 2 has a No-Call run of length 11 from position 48030639 to position 48030706 ( 0.07 Kb)
    Chr 3 has a No-Call run of length 15 from position 37035040 to position 37035108 ( 0.07 Kb)
    Chr 3 has a No-Call run of length 11 from position 38592737 to position 38592912 ( 0.17 Kb)
    Chr 5 has a No-Call run of length 10 from position 112174759 to position 112175213 ( 0.45 Kb)
    Chr 7 has a No-Call run of length 15 from position 117149197 to position 117170972 (21.77 Kb)
    Chr 7 has a No-Call run of length 13 from position 117170984 to position 117171007 ( 0.02 Kb)
    Chr 7 has a No-Call run of length 11 from position 117180210 to position 117180269 ( 0.06 Kb)
    Chr 7 has a No-Call run of length 10 from position 117180363 to position 117180401 ( 0.04 Kb)
    Chr 7 has a No-Call run of length 12 from position 117230480 to position 117232013 ( 1.53 Kb)
    Chr 7 has a No-Call run of length 26 from position 117232086 to position 117232223 ( 0.14 Kb)
    Chr 7 has a No-Call run of length 14 from position 117232266 to position 117232273 ( 0.01 Kb)
    Chr 7 has a No-Call run of length 10 from position 117251676 to position 117251700 ( 0.02 Kb)
    Chr 7 has a No-Call run of length 12 from position 117267592 to position 117267643 ( 0.05 Kb)
    Chr 7 has a No-Call run of length 10 from position 117282538 to position 117282548 ( 0.01 Kb)
    Chr 7 has a No-Call run of length 13 from position 150648739 to position 150648797 ( 0.06 Kb)
    Chr 10 has a No-Call run of length 11 from position 89720709 to position 89720805 ( 0.10 Kb)
    Chr 11 has a No-Call run of length 14 from position 5247872 to position 5248032 ( 0.16 Kb)
    Chr 11 has a No-Call run of length 16 from position 5248154 to position 5248182 ( 0.03 Kb)
    Chr 11 has a No-Call run of length 10 from position 64577180 to position 64577506 ( 0.33 Kb)
    Chr 13 has a No-Call run of length 14 from position 32906752 to position 32906942 ( 0.19 Kb)
    Chr 13 has a No-Call run of length 20 from position 32913119 to position 32913559 ( 0.44 Kb)
    Chr 13 has a No-Call run of length 20 from position 32914693 to position 32914967 ( 0.27 Kb)
    Chr 15 has a No-Call run of length 12 from position 48762860 to position 48764862 ( 2.00 Kb)
    Chr 15 has a No-Call run of length 10 from position 48782204 to position 48786447 ( 4.24 Kb)
    Chr 15 has a No-Call run of length 11 from position 48807626 to position 48812952 ( 5.33 Kb)
    Chr 15 has a No-Call run of length 11 from position 72643577 to position 72645446 ( 1.87 Kb)
    Chr 16 has a No-Call run of length 17 from position 23646781 to position 23647357 ( 0.58 Kb)
    Chr 17 has a No-Call run of length 11 from position 41245033 to position 41245249 ( 0.22 Kb)
    Chr 17 has a No-Call run of length 11 from position 41258495 to position 41267747 ( 9.25 Kb)
    Chr 17 has a No-Call run of length 10 from position 45374812 to position 45374812 ( 0.00 Kb)
    mtDNA has a No-Call run of length 179 from position 56 to position 16482 (16.43 Kb)

    Chr 0 has a ROH of length 266 from position 0 to position 0 ( 0.00 Mb)
    Chr 1 has a ROH of length 218 from position 15651062 to position 16451766 ( 0.80 Mb)
    Chr 1 has a ROH of length 208 from position 32745281 to position 33988036 ( 1.24 Mb)
    Chr 1 has a ROH of length 303 from position 45340703 to position 46923102 ( 1.58 Mb)
    Chr 1 has a ROH of length 211 from position 153514241 to position 154548331 ( 1.03 Mb)
    Chr 1 has a ROH of length 4216 from position 181436883 to position 202419104 (20.98 Mb)
    Chr 1 has a ROH of length 227 from position 202912422 to position 203492986 ( 0.58 Mb)
    Chr 2 has a ROH of length 438 from position 47630253 to position 47724722 ( 0.09 Mb)
    Chr 2 has a ROH of length 334 from position 80735832 to position 82769207 ( 2.03 Mb)
    Chr 2 has a ROH of length 244 from position 96549198 to position 98685684 ( 2.14 Mb)
    Chr 2 has a ROH of length 313 from position 166847834 to position 166904279 ( 0.06 Mb)
    Chr 2 has a ROH of length 267 from position 218807195 to position 219943846 ( 1.14 Mb)
    Chr 2 has a ROH of length 270 from position 234738175 to position 235440860 ( 0.70 Mb)
    Chr 3 has a ROH of length 375 from position 17168021 to position 19224498 ( 2.06 Mb)
    Chr 3 has a ROH of length 228 from position 35313074 to position 36485336 ( 1.17 Mb)
    Chr 3 has a ROH of length 461 from position 36986932 to position 37092140 ( 0.11 Mb)
    Chr 3 has a ROH of length 264 from position 45153318 to position 46279921 ( 1.13 Mb)
    Chr 3 has a ROH of length 492 from position 48626047 to position 51768810 ( 3.14 Mb)
    Chr 3 has a ROH of length 280 from position 82616037 to position 84961960 ( 2.35 Mb)
    Chr 3 has a ROH of length 215 from position 101901465 to position 103155556 ( 1.25 Mb)
    Chr 3 has a ROH of length 418 from position 127693417 to position 129646344 ( 1.95 Mb)
    Chr 3 has a ROH of length 254 from position 135556316 to position 137235241 ( 1.68 Mb)
    Chr 3 has a ROH of length 268 from position 157312557 to position 158812464 ( 1.50 Mb)
    Chr 3 has a ROH of length 496 from position 165117883 to position 167915380 ( 2.80 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 4 has a ROH of length 214 from position 53136123 to position 54542201 ( 1.41 Mb)
    Chr 4 has a ROH of length 341 from position 62865413 to position 64601665 ( 1.74 Mb)
    Chr 4 has a ROH of length 283 from position 72083374 to position 73645351 ( 1.56 Mb)
    Chr 4 has a ROH of length 200 from position 130569024 to position 131509212 ( 0.94 Mb)
    Chr 4 has a ROH of length 759 from position 179936956 to position 182408040 ( 2.47 Mb)
    Chr 5 has a ROH of length 210 from position 8634454 to position 9438406 ( 0.80 Mb)
    Chr 5 has a ROH of length 254 from position 36739499 to position 37280264 ( 0.54 Mb)
    Chr 5 has a ROH of length 247 from position 87087119 to position 88890614 ( 1.80 Mb)
    Chr 5 has a ROH of length 210 from position 92196315 to position 93773340 ( 1.58 Mb)
    Chr 5 has a ROH of length 233 from position 139045055 to position 140371570 ( 1.33 Mb)
    Chr 5 has a ROH of length 1098 from position 163124203 to position 167651381 ( 4.53 Mb)
    Chr 5 has a ROH of length 508 from position 172167974 to position 173642871 ( 1.47 Mb)
    Chr 5 has a ROH of length 277 from position 176243454 to position 176836047 ( 0.59 Mb)
    Chr 6 has a ROH of length 214 from position 11771259 to position 12513226 ( 0.74 Mb)
    Chr 6 has a ROH of length 1037 from position 28999218 to position 29924713 ( 0.93 Mb)
    Chr 6 has a ROH of length 719 from position 30047503 to position 30330341 ( 0.28 Mb)
    Chr 6 has a ROH of length 390 from position 30712327 to position 30932532 ( 0.22 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 6 has a ROH of length 244 from position 31432587 to position 31547460 ( 0.11 Mb)
    Chr 6 has a ROH of length 354 from position 32963784 to position 33121678 ( 0.16 Mb)
    Chr 6 has a ROH of length 217 from position 42739994 to position 43519163 ( 0.78 Mb)
    Chr 6 has a ROH of length 322 from position 48357970 to position 50261878 ( 1.90 Mb)
    Chr 6 has a ROH of length 220 from position 65512193 to position 66696271 ( 1.18 Mb)
    Chr 6 has a ROH of length 214 from position 118372057 to position 119421422 ( 1.05 Mb)
    Chr 7 has a ROH of length 287 from position 73053490 to position 75172226 ( 2.12 Mb)
    Chr 7 has a ROH of length 269 from position 96620591 to position 97929046 ( 1.31 Mb)
    Chr 7 has a ROH of length 260 from position 100013402 to position 100922977 ( 0.91 Mb)
    Chr 7 has a ROH of length 217 from position 113473500 to position 114901579 ( 1.43 Mb)
    Chr 7 has a ROH of length 786 from position 117138367 to position 117406238 ( 0.27 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 7 has a ROH of length 239 from position 136334922 to position 137534627 ( 1.20 Mb)
    Chr 7 has a ROH of length 221 from position 140349421 to position 141209653 ( 0.86 Mb)
    Chr 7 has a ROH of length 210 from position 145728709 to position 146747273 ( 1.02 Mb)
    Chr 7 has a ROH of length 468 from position 149963025 to position 150822192 ( 0.86 Mb)
    Chr 8 has a ROH of length 294 from position 42605081 to position 47760856 ( 5.16 Mb)
    Chr 8 has a ROH of length 225 from position 49859565 to position 51368483 ( 1.51 Mb)
    Chr 8 has a ROH of length 223 from position 75007624 to position 76016702 ( 1.01 Mb)
    Chr 9 has a ROH of length 207 from position 33586236 to position 34708946 ( 1.12 Mb)
    Chr 9 has a ROH of length 216 from position 41122073 to position 70973695 (29.85 Mb)
    Chr 9 has a ROH of length 236 from position 82712307 to position 84170701 ( 1.46 Mb)
    Chr 9 has a ROH of length 221 from position 94561730 to position 96189394 ( 1.63 Mb)
    Chr 10 has a ROH of length 829 from position 8165550 to position 11293778 ( 3.13 Mb)
    Chr 10 has a ROH of length 302 from position 45401601 to position 47620300 ( 2.22 Mb)
    Chr 10 has a ROH of length 333 from position 47671856 to position 50151649 ( 2.48 Mb)
    Chr 10 has a ROH of length 225 from position 75708906 to position 77046691 ( 1.34 Mb)
    Chr 10 has a ROH of length 235 from position 101325915 to position 102207522 ( 0.88 Mb)
    Chr 11 has a ROH of length 384 from position 65753304 to position 67492084 ( 1.74 Mb)
    Chr 11 has a ROH of length 234 from position 71221331 to position 72306935 ( 1.09 Mb)
    Chr 11 has a ROH of length 286 from position 84380034 to position 86103702 ( 1.72 Mb)
    Chr 11 has a ROH of length 204 from position 108031657 to position 108192148 ( 0.16 Mb)
    Chr 12 has a ROH of length 233 from position 43399288 to position 44919685 ( 1.52 Mb)
    Chr 13 has a ROH of length 480 from position 32906752 to position 32969073 ( 0.06 Mb)
    Chr 13 has a ROH of length 241 from position 96180914 to position 97885144 ( 1.70 Mb)
    Chr 14 has a ROH of length 373 from position 23812590 to position 24115473 ( 0.30 Mb)
    Chr 14 has a ROH of length 1677 from position 61804919 to position 70375623 ( 8.57 Mb)
    Chr 15 has a ROH of length 433 from position 74352941 to position 76869161 ( 2.52 Mb)
    Chr 16 has a ROH of length 213 from position 47436017 to position 48995896 ( 1.56 Mb)
    Chr 17 has a ROH of length 242 from position 41244017 to position 41325764 ( 0.08 Mb)
    Chr 18 has a ROH of length 249 from position 24291265 to position 24987480 ( 0.70 Mb)
    Chr 19 has a ROH of length 260 from position 40123536 to position 41223203 ( 1.10 Mb)
    Chr 20 has a ROH of length 277 from position 24437203 to position 29507543 ( 5.07 Mb)
    Total ROH Mb: 169.28
    Total genome Mb: 2731.94
    The detected ROHs account for 6.196 % of the reported genome.


    All samples FTDNA of various vintages.

    Some useful read :

    https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2981575/
    that Ecuadorian: 170 holy cow (!) makes sense though in terms of small population founder effect.

  9. The Following User Says Thank You to Freb For This Useful Post:

     omgpeeps (11-25-2022)

  10. #6
    Suspended Account
    Posts
    961
    Sex
    Location
    north africa
    Ethnicity
    berber
    Nationality
    Morocco
    aDNA Match (1st)
    gun012
    aDNA Match (2nd)
    gun011
    aDNA Match (3rd)
    gun002
    Y-DNA (P)
    E-A30032(xY141667)
    mtDNA (M)
    V25b*

    Morocco Algeria Byzantine Empire
    Chr 1 has a ROH of length 283 from position 92227848 to position 94055542 ( 1.83 Mb)
    Chr 2 has a ROH of length 224 from position 47612156 to position 47790258 ( 0.18 Mb)
    Chr 2 has a ROH of length 345 from position 166785836 to position 166930062 ( 0.14 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 2 has a ROH of length 450 from position 179364778 to position 179642665 ( 0.28 Mb)
    Chr 4 has a ROH of length 209 from position 105561708 to position 106573131 ( 1.01 Mb)
    Chr 4 has a ROH of length 240 from position 121538689 to position 122621147 ( 1.08 Mb)
    Chr 4 has a ROH of length 515 from position 122627925 to position 125497725 ( 2.87 Mb)
    Chr 4 has a ROH of length 256 from position 174885061 to position 175891164 ( 1.01 Mb)
    Chr 5 has a ROH of length 454 from position 39625080 to position 42478347 ( 2.85 Mb)
    Chr 5 has a ROH of length 293 from position 55423372 to position 56681744 ( 1.26 Mb)
    Chr 6 has a ROH of length 450 from position 12832046 to position 14713138 ( 1.88 Mb)
    Chr 6 has a ROH of length 206 from position 15660871 to position 16423673 ( 0.76 Mb)
    Chr 6 has a ROH of length 219 from position 51393730 to position 52208065 ( 0.81 Mb)
    Chr 7 has a ROH of length 209 from position 98857884 to position 99639187 ( 0.78 Mb)
    Chr 10 has a ROH of length 313 from position 95959384 to position 97040225 ( 1.08 Mb)
    Chr 11 has a ROH of length 247 from position 49114605 to position 55148534 ( 6.03 Mb)
    Chr 12 has a ROH of length 215 from position 94943787 to position 95728972 ( 0.79 Mb)
    Chr 13 has a ROH of length 627 from position 32890583 to position 32935485 ( 0.04 Mb)
    Chr 13 has a ROH of length 337 from position 88032490 to position 90432585 ( 2.40 Mb)
    Chr 14 has a ROH of length 217 from position 23861811 to position 23994145 ( 0.13 Mb)
    Chr 15 has a ROH of length 223 from position 48675874 to position 48941544 ( 0.27 Mb)
    Chr 16 has a ROH of length 273 from position 12981789 to position 13984366 ( 1.00 Mb)
    Chr 16 has a ROH of length 265 from position 23455864 to position 24127743 ( 0.67 Mb)
    Chr 19 has a ROH of length 208 from position 11163601 to position 11224261 ( 0.06 Mb)
    Chr 21 has a ROH of length 212 from position 44569406 to position 45467448 ( 0.90 Mb)
    Chr 22 has a ROH of length 248 from position 42523598 to position 42536487 ( 0.01 Mb)
    Total ROH Mb: 30.14
    Total genome Mb: 3006.69
    The detected ROHs account for 1.002 % of the reported genome.

    The following percentages are for individual homozygous SNPs, not just those in ROHs.

    Chr 1: 84.436 % (44150 of 52288 SNPs) are homozygous, 660 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 2: 83.249 % (43174 of 51861 SNPs) are homozygous, 626 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 3: 83.554 % (35915 of 42984 SNPs) are homozygous, 517 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 4: 83.518 % (32931 of 39430 SNPs) are homozygous, 509 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 5: 83.299 % (30868 of 37057 SNPs) are homozygous, 457 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 6: 81.486 % (35819 of 43957 SNPs) are homozygous, 495 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 7: 82.444 % (28289 of 34313 SNPs) are homozygous, 470 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 8: 83.082 % (26259 of 31606 SNPs) are homozygous, 339 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 9: 82.476 % (21809 of 26443 SNPs) are homozygous, 414 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 10: 83.735 % (26924 of 32154 SNPs) are homozygous, 381 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 11: 83.657 % (26520 of 31701 SNPs) are homozygous, 369 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 12: 83.184 % (24427 of 29365 SNPs) are homozygous, 411 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 13: 83.346 % (18322 of 21983 SNPs) are homozygous, 218 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 14: 82.974 % (16472 of 19852 SNPs) are homozygous, 246 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 15: 82.431 % (15661 of 18999 SNPs) are homozygous, 252 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 16: 81.897 % (16712 of 20406 SNPs) are homozygous, 298 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 17: 83.784 % (16312 of 19469 SNPs) are homozygous, 327 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 18: 81.969 % (14515 of 17708 SNPs) are homozygous, 154 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 19: 83.615 % (12819 of 15331 SNPs) are homozygous, 360 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 20: 81.002 % (11994 of 14807 SNPs) are homozygous, 164 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 21: 81.618 % ( 7020 of 8601 SNPs) are homozygous, 132 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 22: 83.531 % ( 7679 of 9193 SNPs) are homozygous, 161 No-Calls, 0 heterozygous SNPs treated as homozygous

    Chr X: 4.458 % ( 726 of 16286 SNPs) are homozygous, 318 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr Y: 3549 SNPs, 252 No-Calls, 0 heterozygous SNPs treated as homozygous
    mtDNA : 4145 SNPs, 92 No-Calls, 0 heterozygous SNPs treated as homozygous

    Total autosomal (Chr 1-22): 1.285 % ( 7960 of 619508 SNPs) are NoCalls
    Total autosomal (Chr 1-22): 16.936 % (104917 of 619508 SNPs) are Heterozygous (this tally excludes 1 heterozygous SNPs that were treated as homozygous)
    Total autosomal (Chr 1-22): 83.064 % (514591 of 619508 SNPs) are Homozygous (this tally includes 1 heterozygous SNPs that were treated as homozygous)

    I don't understand can explain this thanks
    38.4 Mesolithic_North_Africa
    37.4 Anatolia_Barcin_Neolithic
    9.6 Levant_Natufian
    5.8 Caucasian_Neolithic
    4.6 Basal_Central/West_African
    2.2 West-Pontic_Steppe__Eneolithic_Sredny-Stog_Culture
    1.2 Wales_Meso
    0.4 CHN_Mid-Yellow-River_Mid-Neolithic_YangShao_Culture
    0.4 PER_LaGalgada_4100BP

  11. #7
    Registered Users
    Posts
    1,795
    Sex
    Location
    France
    Ethnicity
    Breton & Maineau
    Nationality
    French
    aDNA Match (1st)
    ITA_Rome_Renaissance:RMPR1224
    aDNA Match (2nd)
    VK2020_DNK_Langeland_VA:VK317
    aDNA Match (3rd)
    CZE_LBA_Knoviz:I13798
    Y-DNA (P)
    R-BY145002 (DF13+)
    mtDNA (M)
    U4c1a

    France France Bretagne
    Quote Originally Posted by capsian View Post
    Chr 1 has a ROH of length 283 from position 92227848 to position 94055542 ( 1.83 Mb)
    Chr 2 has a ROH of length 224 from position 47612156 to position 47790258 ( 0.18 Mb)
    Chr 2 has a ROH of length 345 from position 166785836 to position 166930062 ( 0.14 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 2 has a ROH of length 450 from position 179364778 to position 179642665 ( 0.28 Mb)
    Chr 4 has a ROH of length 209 from position 105561708 to position 106573131 ( 1.01 Mb)
    Chr 4 has a ROH of length 240 from position 121538689 to position 122621147 ( 1.08 Mb)
    Chr 4 has a ROH of length 515 from position 122627925 to position 125497725 ( 2.87 Mb)
    Chr 4 has a ROH of length 256 from position 174885061 to position 175891164 ( 1.01 Mb)
    Chr 5 has a ROH of length 454 from position 39625080 to position 42478347 ( 2.85 Mb)
    Chr 5 has a ROH of length 293 from position 55423372 to position 56681744 ( 1.26 Mb)
    Chr 6 has a ROH of length 450 from position 12832046 to position 14713138 ( 1.88 Mb)
    Chr 6 has a ROH of length 206 from position 15660871 to position 16423673 ( 0.76 Mb)
    Chr 6 has a ROH of length 219 from position 51393730 to position 52208065 ( 0.81 Mb)
    Chr 7 has a ROH of length 209 from position 98857884 to position 99639187 ( 0.78 Mb)
    Chr 10 has a ROH of length 313 from position 95959384 to position 97040225 ( 1.08 Mb)
    Chr 11 has a ROH of length 247 from position 49114605 to position 55148534 ( 6.03 Mb)
    Chr 12 has a ROH of length 215 from position 94943787 to position 95728972 ( 0.79 Mb)
    Chr 13 has a ROH of length 627 from position 32890583 to position 32935485 ( 0.04 Mb)
    Chr 13 has a ROH of length 337 from position 88032490 to position 90432585 ( 2.40 Mb)
    Chr 14 has a ROH of length 217 from position 23861811 to position 23994145 ( 0.13 Mb)
    Chr 15 has a ROH of length 223 from position 48675874 to position 48941544 ( 0.27 Mb)
    Chr 16 has a ROH of length 273 from position 12981789 to position 13984366 ( 1.00 Mb)
    Chr 16 has a ROH of length 265 from position 23455864 to position 24127743 ( 0.67 Mb)
    Chr 19 has a ROH of length 208 from position 11163601 to position 11224261 ( 0.06 Mb)
    Chr 21 has a ROH of length 212 from position 44569406 to position 45467448 ( 0.90 Mb)
    Chr 22 has a ROH of length 248 from position 42523598 to position 42536487 ( 0.01 Mb)
    Total ROH Mb: 30.14
    Total genome Mb: 3006.69
    The detected ROHs account for 1.002 % of the reported genome.

    The following percentages are for individual homozygous SNPs, not just those in ROHs.

    Chr 1: 84.436 % (44150 of 52288 SNPs) are homozygous, 660 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 2: 83.249 % (43174 of 51861 SNPs) are homozygous, 626 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 3: 83.554 % (35915 of 42984 SNPs) are homozygous, 517 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 4: 83.518 % (32931 of 39430 SNPs) are homozygous, 509 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 5: 83.299 % (30868 of 37057 SNPs) are homozygous, 457 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 6: 81.486 % (35819 of 43957 SNPs) are homozygous, 495 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 7: 82.444 % (28289 of 34313 SNPs) are homozygous, 470 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 8: 83.082 % (26259 of 31606 SNPs) are homozygous, 339 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 9: 82.476 % (21809 of 26443 SNPs) are homozygous, 414 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 10: 83.735 % (26924 of 32154 SNPs) are homozygous, 381 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 11: 83.657 % (26520 of 31701 SNPs) are homozygous, 369 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 12: 83.184 % (24427 of 29365 SNPs) are homozygous, 411 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 13: 83.346 % (18322 of 21983 SNPs) are homozygous, 218 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 14: 82.974 % (16472 of 19852 SNPs) are homozygous, 246 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 15: 82.431 % (15661 of 18999 SNPs) are homozygous, 252 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 16: 81.897 % (16712 of 20406 SNPs) are homozygous, 298 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 17: 83.784 % (16312 of 19469 SNPs) are homozygous, 327 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 18: 81.969 % (14515 of 17708 SNPs) are homozygous, 154 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 19: 83.615 % (12819 of 15331 SNPs) are homozygous, 360 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 20: 81.002 % (11994 of 14807 SNPs) are homozygous, 164 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 21: 81.618 % ( 7020 of 8601 SNPs) are homozygous, 132 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 22: 83.531 % ( 7679 of 9193 SNPs) are homozygous, 161 No-Calls, 0 heterozygous SNPs treated as homozygous

    Chr X: 4.458 % ( 726 of 16286 SNPs) are homozygous, 318 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr Y: 3549 SNPs, 252 No-Calls, 0 heterozygous SNPs treated as homozygous
    mtDNA : 4145 SNPs, 92 No-Calls, 0 heterozygous SNPs treated as homozygous

    Total autosomal (Chr 1-22): 1.285 % ( 7960 of 619508 SNPs) are NoCalls
    Total autosomal (Chr 1-22): 16.936 % (104917 of 619508 SNPs) are Heterozygous (this tally excludes 1 heterozygous SNPs that were treated as homozygous)
    Total autosomal (Chr 1-22): 83.064 % (514591 of 619508 SNPs) are Homozygous (this tally includes 1 heterozygous SNPs that were treated as homozygous)

    I don't understand can explain this thanks
    I translated your roH to centimorgan:

    chr start end cm
    1 92227848 94055542 0.6
    2 47612156 47790258 0.2
    2 166785836 166930062 0.1
    2 179364778 179642665 0.1
    4 105561708 106573131 0.7
    4 121538689 122621147 1.2
    4 122627925 125497725 2.0
    4 174885061 175891164 1.5
    5 39625080 42478347 1.1
    5 55423372 56681744 2.1
    6 12832046 14713138 2.9
    6 15660871 16423673 1.1
    6 51393730 52208065 0.7
    7 98857884 99639187 0.2
    10 95959384 97040225 0.3
    11 49114605 55148534 0.1
    12 94943787 95728972 1.4
    13 32890583 32935485 0.0
    13 88032490 90432585 1.0
    14 23861811 23994145 0.3

    Your longest inbred segment is 2.9 cM. This is probably normal in the same population and therefore no recent family ties between your parents.


    As for the percentages of homozygous markers, they are different depending on the DNA test.
    For example, I have 77% who are homozygous with a 23andMe V3 file and 83% with a 23andMe V5 file.
    Y haplogroup: R1b: L21 --> DF13 --> BY145002
    The oldest L21 known are I2457 et I2565 from Stonehenge (Beaker Culture, 2400-1900 BC)

    MTDNA: U4c1
    The oldest U4c1 known are "poz224", Yamnaya culture (2882-2698 BC), and 2 Bell-Beaker in Germany (Karsdorf, 2314-2042 BC)

    Paternal MTDNA: K1b2b
    The oldest K1b2 are Eastern European Mesolithic: Kunda Donkalnis5 (Lithuania), 6000 BC and Meso-Ene Lepenski Vir Lepe28 in Serbia, 5900 BC.
    The oldest K1b2b is Alt-3, Corded-Ware Germany (2500 BC)

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     capsian (11-25-2022),  Freb (01-20-2023)

  13. #8
    Registered Users
    Posts
    153
    Sex

    If you have a relatively small individual run of homozygosity, although over whole genome sequencing and in a highly unstable zone, presumably this too would imply recent shared parental ancestry?
    E.g. The HLA zone on chromosome 6 - thousands of exclusively homozygous variants over a 167,000 base pairs sequence, 50 or more of which occur in less than 1 in 10,000 people sampled and more than 10 of which are not found at all on a global database of over 100,00 samples.

  14. #9
    Registered Users
    Posts
    111
    Sex
    Location
    Malaysia
    Ethnicity
    South Asian
    Y-DNA (P)
    R1a-Y7
    mtDNA (M)
    HV

    Malaysia
     
    Chr 1 has a ROH of length 226 from position 45791154 to position 45966005 ( 0.17 Mb)
    Chr 1 has a ROH of length 501 from position 105394454 to position 108288220 ( 2.89 Mb)
    Chr 2 has a ROH of length 911 from position 47572160 to position 47789775 ( 0.22 Mb) (2 heterozygous SNPs treated as homozygous)
    Chr 2 has a ROH of length 726 from position 48013099 to position 48034084 ( 0.02 Mb)
    Chr 2 has a ROH of length 662 from position 129086164 to position 133474892 ( 4.39 Mb)
    Chr 2 has a ROH of length 329 from position 179558412 to position 179610967 ( 0.05 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 2 has a ROH of length 414 from position 189494381 to position 189882065 ( 0.39 Mb)
    Chr 2 has a ROH of length 235 from position 241681764 to position 241911027 ( 0.23 Mb)
    Chr 3 has a ROH of length 360 from position 148345526 to position 149347571 ( 1.00 Mb)
    Chr 5 has a ROH of length 969 from position 98599137 to position 106098747 ( 7.50 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 5 has a ROH of length 564 from position 112152920 to position 112185491 ( 0.03 Mb)
    Chr 6 has a ROH of length 212 from position 31132140 to position 31264361 ( 0.13 Mb)
    Chr 6 has a ROH of length 256 from position 85211340 to position 87063774 ( 1.85 Mb)
    Chr 6 has a ROH of length 880 from position 99279449 to position 104853996 ( 5.57 Mb)
    Chr 6 has a ROH of length 427 from position 115946279 to position 118101631 ( 2.16 Mb)
    Chr 7 has a ROH of length 276 from position 116864331 to position 117243836 ( 0.38 Mb)
    Chr 9 has a ROH of length 200 from position 34637265 to position 34652096 ( 0.01 Mb)
    Chr 10 has a ROH of length 329 from position 7783546 to position 8606014 ( 0.82 Mb)
    Chr 10 has a ROH of length 229 from position 88439174 to position 88938886 ( 0.50 Mb)
    Chr 11 has a ROH of length 829 from position 46695414 to position 50430532 ( 3.74 Mb)
    Chr 11 has a ROH of length 770 from position 108038477 to position 108440814 ( 0.40 Mb)
    Chr 12 has a ROH of length 498 from position 1936988 to position 3231116 ( 1.29 Mb)
    Chr 12 has a ROH of length 207 from position 13651081 to position 14075430 ( 0.42 Mb)
    Chr 12 has a ROH of length 205 from position 116213801 to position 116913028 ( 0.70 Mb)
    Chr 13 has a ROH of length 844 from position 32911889 to position 32915344 ( 0.00 Mb)
    Chr 13 has a ROH of length 271 from position 103686762 to position 104380700 ( 0.69 Mb)
    Chr 13 has a ROH of length 255 from position 105640647 to position 106393971 ( 0.75 Mb)
    Chr 14 has a ROH of length 211 from position 23848311 to position 23886150 ( 0.04 Mb)
    Chr 15 has a ROH of length 275 from position 25114867 to position 25771369 ( 0.66 Mb)
    Chr 15 has a ROH of length 566 from position 48370103 to position 48830006 ( 0.46 Mb)
    Chr 15 has a ROH of length 342 from position 96890714 to position 97970963 ( 1.08 Mb)
    Chr 16 has a ROH of length 310 from position 2121531 to position 2263516 ( 0.14 Mb)
    Chr 16 has a ROH of length 401 from position 23400194 to position 23725721 ( 0.33 Mb)
    Chr 16 has a ROH of length 208 from position 31888684 to position 48466286 (16.58 Mb)
    Chr 16 has a ROH of length 267 from position 68598007 to position 69006797 ( 0.41 Mb)
    Chr 17 has a ROH of length 936 from position 1595491 to position 4398442 ( 2.80 Mb)
    Chr 17 has a ROH of length 212 from position 7560294 to position 7579465 ( 0.02 Mb)
    Chr 17 has a ROH of length 372 from position 41245474 to position 41247055 ( 0.00 Mb)
    Chr 19 has a ROH of length 205 from position 40843127 to position 41440863 ( 0.60 Mb)
    Chr 19 has a ROH of length 1442 from position 41637219 to position 47587772 ( 5.95 Mb)
    Chr 20 has a ROH of length 542 from position 23903973 to position 30645959 ( 6.74 Mb)
    Chr 22 has a ROH of length 1213 from position 29485708 to position 34000413 ( 4.51 Mb)
    Chr X has a ROH of length 13532 from position 2703633 to position 88452214 (85.75 Mb) (2 heterozygous SNPs treated as homozygous)
    Chr X has a ROH of length 11573 from position 92181907 to position 154916845 (62.73 Mb)
    Chr Y has a ROH of length 1580 from position 5747681 to position 58883690 (53.14 Mb) (2 heterozygous SNPs treated as homozygous)
    mtDNA has a ROH of length 263 from position 523 to position 16391 ( 0.02 Mb)
    Total ROH Mb: 278.29
    Total genome Mb: 3058.10
    The detected ROHs account for 9.100 % of the reported genome.

    The following percentages are for individual homozygous SNPs, not just those in ROHs.

    Chr 1: 70.545 % (35680 of 50578 SNPs) are homozygous, 45 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 2: 70.998 % (38965 of 54882 SNPs) are homozygous, 29 No-Calls, 3 heterozygous SNPs treated as homozygous
    Chr 3: 68.767 % (29794 of 43326 SNPs) are homozygous, 37 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 4: 67.894 % (25034 of 36872 SNPs) are homozygous, 25 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 5: 69.945 % (27154 of 38822 SNPs) are homozygous, 38 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 6: 71.973 % (31188 of 43333 SNPs) are homozygous, 31 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 7: 69.126 % (23946 of 34641 SNPs) are homozygous, 30 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 8: 68.441 % (22574 of 32983 SNPs) are homozygous, 22 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 9: 67.806 % (20093 of 29633 SNPs) are homozygous, 15 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 10: 68.389 % (22424 of 32789 SNPs) are homozygous, 19 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 11: 70.256 % (22864 of 32544 SNPs) are homozygous, 23 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 12: 69.996 % (21917 of 31312 SNPs) are homozygous, 29 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 13: 71.087 % (17724 of 24933 SNPs) are homozygous, 18 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 14: 70.809 % (14969 of 21140 SNPs) are homozygous, 16 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 15: 70.156 % (14984 of 21358 SNPs) are homozygous, 13 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 16: 70.605 % (16499 of 23368 SNPs) are homozygous, 17 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 17: 75.297 % (17249 of 22908 SNPs) are homozygous, 17 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 18: 69.390 % (13182 of 18997 SNPs) are homozygous, 11 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 19: 74.051 % (12576 of 16983 SNPs) are homozygous, 13 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 20: 69.395 % (12546 of 18079 SNPs) are homozygous, 11 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 21: 67.774 % ( 6894 of 10172 SNPs) are homozygous, 4 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 22: 71.366 % ( 7846 of 10994 SNPs) are homozygous, 6 No-Calls, 0 heterozygous SNPs treated as homozygous

    Chr X: 99.988 % (25247 of 25250 SNPs) are homozygous, 19 No-Calls, 2 heterozygous SNPs treated as homozygous
    Chr Y: 1668 SNPs, 2 No-Calls, 2 heterozygous SNPs treated as homozygous
    Chr XY: 36 SNPs, 0 No-Calls, 0 heterozygous SNPs treated as homozygous
    mtDNA : 263 SNPs, 0 No-Calls, 0 heterozygous SNPs treated as homozygous

    Total autosomal (Chr 1-22): 0.072 % ( 469 of 650647 SNPs) are NoCalls
    Total autosomal (Chr 1-22): 29.900 % (194545 of 650647 SNPs) are Heterozygous (this tally excludes 4 heterozygous SNPs that were treated as homozygous)
    Total autosomal (Chr 1-22): 70.100 % (456102 of 650647 SNPs) are Homozygous (this tally includes 4 heterozygous SNPs that were treated as homozygous)

    Sample: ESPLover4
    Fit: 1.7118
    Results: Telugu GBR 67.5
    Srubnaya Alakul MLBA 16.5
    Gonur1 BA 12.5
    Mereke MBA 3.5

    Sample: ESPLover4
    Fit: 1.9161
    Results: Telugu GBR (3772/4061) 66.5
    Abusanteer IA3 33.5

    Modern:
    Sample: ESPLover4
    Fit: 1.3566
    Results: Punjabi Sikh India 52.5
    Chamar 47.5

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  16. #10
    Registered Users
    Posts
    218
    Sex

    Father

    Chr 21 has a No-Call run of length 11 from position 10748558 to position 10817654 (69.10 Kb)

    Chr 1 has a ROH of length 207 from position 121347299 to position 144553648 (23.21 Mb)
    Chr 3 has a ROH of length 200 from position 37035047 to position 37413764 ( 0.38 Mb)
    Chr 5 has a ROH of length 231 from position 39437999 to position 40759005 ( 1.32 Mb)
    Chr 9 has a ROH of length 205 from position 102077561 to position 103485819 ( 1.41 Mb)
    Chr 11 has a ROH of length 254 from position 107872524 to position 108412369 ( 0.54 Mb)
    Chr 13 has a ROH of length 435 from position 32906732 to position 32921030 ( 0.01 Mb)
    Chr 15 has a ROH of length 226 from position 75648138 to position 77494354 ( 1.85 Mb)
    Chr 17 has a ROH of length 595 from position 41064737 to position 41325764 ( 0.26 Mb)
    Chr 19 has a ROH of length 306 from position 11210898 to position 11243735 ( 0.03 Mb)
    Chr 22 has a ROH of length 341 from position 40698362 to position 42539385 ( 1.84 Mb)
    Total ROH Mb: 30.85
    Total genome Mb: 3007.10
    The detected ROHs account for 1.026 % of the reported genome.

    The following percentages are for individual homozygous SNPs, not just those in ROHs.

    Chr 1: 84.356 % (41768 of 49514 SNPs) are homozygous, 1248 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 2: 84.295 % (43643 of 51774 SNPs) are homozygous, 1157 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 3: 83.851 % (36076 of 43024 SNPs) are homozygous, 1007 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 4: 83.703 % (33041 of 39474 SNPs) are homozygous, 993 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 5: 84.759 % (31388 of 37032 SNPs) are homozygous, 857 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 6: 82.314 % (36237 of 44023 SNPs) are homozygous, 962 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 7: 83.788 % (28788 of 34358 SNPs) are homozygous, 911 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 8: 83.890 % (26579 of 31683 SNPs) are homozygous, 692 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 9: 83.420 % (22062 of 26447 SNPs) are homozygous, 751 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 10: 82.907 % (25310 of 30528 SNPs) are homozygous, 690 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 11: 83.982 % (25985 of 30941 SNPs) are homozygous, 674 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 12: 82.876 % (24392 of 29432 SNPs) are homozygous, 729 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 13: 82.810 % (18282 of 22077 SNPs) are homozygous, 402 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 14: 84.084 % (16784 of 19961 SNPs) are homozygous, 499 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 15: 83.621 % (15893 of 19006 SNPs) are homozygous, 478 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 16: 84.012 % (17136 of 20397 SNPs) are homozygous, 545 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 17: 85.051 % (16499 of 19399 SNPs) are homozygous, 533 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 18: 83.463 % (14752 of 17675 SNPs) are homozygous, 319 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 19: 84.179 % (12557 of 14917 SNPs) are homozygous, 579 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 20: 83.898 % (12401 of 14781 SNPs) are homozygous, 345 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 21: 83.130 % ( 7155 of 8607 SNPs) are homozygous, 248 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 22: 83.109 % ( 7410 of 8916 SNPs) are homozygous, 267 No-Calls, 0 heterozygous SNPs treated as homozygous

    Chr X: 6.830 % ( 1129 of 16530 SNPs) are homozygous, 716 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr Y: 3733 SNPs, 456 No-Calls, 0 heterozygous SNPs treated as homozygous
    mtDNA : 4301 SNPs, 299 No-Calls, 0 heterozygous SNPs treated as homozygous

    Total autosomal (Chr 1-22): 2.425 % ( 14886 of 613966 SNPs) are NoCalls
    Total autosomal (Chr 1-22): 16.260 % (99828 of 613966 SNPs) are Heterozygous (this tally excludes 0 heterozygous SNPs that were treated as homozygous)
    Total autosomal (Chr 1-22): 83.740 % (514138 of 613966 SNPs) are Homozygous (this tally includes 0 heterozygous SNPs that were treated as homozygous)




    Mother:
    Chr Y has a No-Call run of length 3733 from position 1726773 to position 58997092 (57270.32 Kb)

    Chr 1 has a ROH of length 202 from position 45434659 to position 46664576 ( 1.23 Mb)
    Chr 1 has a ROH of length 253 from position 120361206 to position 143543213 (23.18 Mb)
    Chr 2 has a ROH of length 217 from position 47541864 to position 47778096 ( 0.24 Mb)
    Chr 2 has a ROH of length 301 from position 152153243 to position 153273442 ( 1.12 Mb)
    Chr 2 has a ROH of length 202 from position 179271075 to position 179470369 ( 0.20 Mb)
    Chr 3 has a ROH of length 356 from position 78987603 to position 81440480 ( 2.45 Mb)
    Chr 5 has a ROH of length 221 from position 36953198 to position 37244554 ( 0.29 Mb)
    Chr 6 has a ROH of length 330 from position 28219695 to position 29293627 ( 1.07 Mb)
    Chr 6 has a ROH of length 419 from position 30365952 to position 30627216 ( 0.26 Mb)
    Chr 6 has a ROH of length 240 from position 31631792 to position 31851354 ( 0.22 Mb)
    Chr 11 has a ROH of length 231 from position 108040562 to position 108498885 ( 0.46 Mb)
    Chr 13 has a ROH of length 435 from position 32906732 to position 32921030 ( 0.01 Mb)
    Chr 15 has a ROH of length 204 from position 48180935 to position 48764870 ( 0.58 Mb)
    Chr 17 has a ROH of length 609 from position 41154748 to position 41539020 ( 0.38 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 21 has a ROH of length 202 from position 47476357 to position 48099610 ( 0.62 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr Y has a ROH of length 3733 from position 1726773 to position 58997092 (57.27 Mb)
    Total ROH Mb: 89.60
    Total genome Mb: 3007.10
    The detected ROHs account for 2.980 % of the reported genome.

    The following percentages are for individual homozygous SNPs, not just those in ROHs.

    Chr 1: 84.197 % (41691 of 49516 SNPs) are homozygous, 1105 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 2: 84.121 % (43557 of 51779 SNPs) are homozygous, 987 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 3: 83.428 % (35895 of 43025 SNPs) are homozygous, 878 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 4: 83.090 % (32799 of 39474 SNPs) are homozygous, 844 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 5: 83.694 % (30996 of 37035 SNPs) are homozygous, 748 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 6: 82.559 % (36350 of 44029 SNPs) are homozygous, 823 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 7: 83.264 % (28608 of 34358 SNPs) are homozygous, 813 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 8: 84.419 % (26749 of 31686 SNPs) are homozygous, 624 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 9: 82.739 % (21882 of 26447 SNPs) are homozygous, 645 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 10: 83.402 % (25461 of 30528 SNPs) are homozygous, 615 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 11: 84.038 % (26004 of 30943 SNPs) are homozygous, 576 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 12: 83.230 % (24498 of 29434 SNPs) are homozygous, 631 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 13: 83.879 % (18518 of 22077 SNPs) are homozygous, 363 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 14: 83.218 % (16612 of 19962 SNPs) are homozygous, 447 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 15: 82.385 % (15659 of 19007 SNPs) are homozygous, 412 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 16: 83.793 % (17093 of 20399 SNPs) are homozygous, 458 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 17: 84.351 % (16364 of 19400 SNPs) are homozygous, 471 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 18: 83.440 % (14748 of 17675 SNPs) are homozygous, 272 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 19: 84.219 % (12568 of 14923 SNPs) are homozygous, 523 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 20: 83.233 % (12306 of 14785 SNPs) are homozygous, 280 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 21: 82.758 % ( 7123 of 8607 SNPs) are homozygous, 212 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 22: 83.894 % ( 7480 of 8916 SNPs) are homozygous, 232 No-Calls, 0 heterozygous SNPs treated as homozygous

    Chr X: 78.434 % (12966 of 16531 SNPs) are homozygous, 543 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr Y: 3733 SNPs, 3733 No-Calls, 0 heterozygous SNPs treated as homozygous
    mtDNA : 4301 SNPs, 309 No-Calls, 0 heterozygous SNPs treated as homozygous

    Total autosomal (Chr 1-22): 2.111 % ( 12959 of 614005 SNPs) are NoCalls
    Total autosomal (Chr 1-22): 16.457 % (101044 of 614005 SNPs) are Heterozygous (this tally excludes 2 heterozygous SNPs that were treated as homozygous)
    Total autosomal (Chr 1-22): 83.543 % (512961 of 614005 SNPs) are Homozygous (this tally includes 2 heterozygous SNPs that were treated as homozygous)



    Myself:

    Chr Y has a No-Call run of length 14 from position 2945498 to position 3026733 (81.23 Kb)
    Chr Y has a No-Call run of length 32 from position 3048114 to position 3299144 (251.03 Kb)
    Chr Y has a No-Call run of length 12 from position 3387992 to position 3419500 (31.51 Kb)
    Chr Y has a No-Call run of length 26 from position 3438029 to position 3496205 (58.18 Kb)
    Chr Y has a No-Call run of length 40 from position 3800253 to position 4065381 (265.13 Kb)
    Chr Y has a No-Call run of length 26 from position 4087052 to position 4239428 (152.38 Kb)
    Chr Y has a No-Call run of length 19 from position 4280157 to position 4389694 (109.54 Kb)
    Chr Y has a No-Call run of length 27 from position 4400485 to position 4518978 (118.49 Kb)
    Chr Y has a No-Call run of length 30 from position 4534217 to position 4672316 (138.10 Kb)
    Chr Y has a No-Call run of length 18 from position 4702703 to position 4800467 (97.76 Kb)
    Chr Y has a No-Call run of length 57 from position 4804521 to position 4925084 (120.56 Kb)
    Chr Y has a No-Call run of length 57 from position 4927998 to position 5012099 (84.10 Kb)
    Chr Y has a No-Call run of length 10 from position 5015824 to position 5034233 (18.41 Kb)
    Chr Y has a No-Call run of length 14 from position 5055224 to position 5085510 (30.29 Kb)
    Chr Y has a No-Call run of length 20 from position 5127976 to position 5187330 (59.35 Kb)
    Chr Y has a No-Call run of length 28 from position 5210582 to position 5287617 (77.03 Kb)
    Chr Y has a No-Call run of length 31 from position 5291619 to position 5357573 (65.95 Kb)
    Chr Y has a No-Call run of length 23 from position 5382696 to position 5434873 (52.18 Kb)
    Chr Y has a No-Call run of length 44 from position 5458035 to position 5557491 (99.46 Kb)
    Chr Y has a No-Call run of length 24 from position 5577743 to position 5672315 (94.57 Kb)
    Chr Y has a No-Call run of length 15 from position 5789456 to position 5907588 (118.13 Kb)
    Chr Y has a No-Call run of length 22 from position 6006768 to position 6421339 (414.57 Kb)
    Chr Y has a No-Call run of length 17 from position 6435266 to position 6579939 (144.67 Kb)
    Chr Y has a No-Call run of length 12 from position 6739767 to position 6739858 ( 0.09 Kb)
    Chr Y has a No-Call run of length 14 from position 8965844 to position 9131474 (165.63 Kb)
    Chr Y has a No-Call run of length 10 from position 28462106 to position 28539062 (76.96 Kb)
    Chr Y has a No-Call run of length 11 from position 28797422 to position 28817559 (20.14 Kb)

    Chr 1 has a ROH of length 201 from position 68851568 to position 69442881 ( 0.59 Mb)
    Chr 1 has a ROH of length 211 from position 88457516 to position 89723344 ( 1.27 Mb)
    Chr 1 has a ROH of length 226 from position 173633528 to position 175109884 ( 1.48 Mb)
    Chr 2 has a ROH of length 437 from position 47637291 to position 47782756 ( 0.15 Mb)
    Chr 2 has a ROH of length 206 from position 62503017 to position 64447884 ( 1.94 Mb)
    Chr 3 has a ROH of length 202 from position 38620852 to position 38656033 ( 0.04 Mb)
    Chr 5 has a ROH of length 252 from position 84062058 to position 85768775 ( 1.71 Mb)
    Chr 5 has a ROH of length 492 from position 111983052 to position 112614518 ( 0.63 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 5 has a ROH of length 376 from position 117577409 to position 119518377 ( 1.94 Mb)
    Chr 6 has a ROH of length 467 from position 29275298 to position 29797951 ( 0.52 Mb)
    Chr 6 has a ROH of length 452 from position 29912564 to position 30321189 ( 0.41 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 7 has a ROH of length 426 from position 117235064 to position 117304813 ( 0.07 Mb)
    Chr 10 has a ROH of length 258 from position 96013824 to position 96852690 ( 0.84 Mb)
    Chr 11 has a ROH of length 212 from position 5247802 to position 5248491 ( 0.00 Mb)
    Chr 13 has a ROH of length 308 from position 32906738 to position 32914885 ( 0.01 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 13 has a ROH of length 252 from position 52408735 to position 52542680 ( 0.13 Mb)
    Chr 15 has a ROH of length 382 from position 48760178 to position 48845043 ( 0.08 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 16 has a ROH of length 431 from position 2125844 to position 2166876 ( 0.04 Mb)
    Chr 16 has a ROH of length 262 from position 67506247 to position 69007987 ( 1.50 Mb)
    Chr 17 has a ROH of length 223 from position 41245072 to position 41251876 ( 0.01 Mb)
    Chr 19 has a ROH of length 352 from position 38917251 to position 39378804 ( 0.46 Mb)
    Total ROH Mb: 13.82
    Total genome Mb: 3003.11
    The detected ROHs account for 0.460 % of the reported genome.

    The following percentages are for individual homozygous SNPs, not just those in ROHs.

    Chr 1: 72.131 % (33658 of 46662 SNPs) are homozygous, 296 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 2: 70.430 % (32488 of 46128 SNPs) are homozygous, 206 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 3: 70.076 % (26991 of 38517 SNPs) are homozygous, 170 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 4: 68.896 % (23366 of 33915 SNPs) are homozygous, 192 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 5: 71.443 % (24567 of 34387 SNPs) are homozygous, 196 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 6: 72.655 % (29341 of 40384 SNPs) are homozygous, 728 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 7: 73.128 % (24171 of 33053 SNPs) are homozygous, 261 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 8: 69.707 % (21099 of 30268 SNPs) are homozygous, 123 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 9: 71.154 % (18917 of 26586 SNPs) are homozygous, 115 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 10: 70.418 % (20569 of 29210 SNPs) are homozygous, 149 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 11: 72.289 % (21201 of 29328 SNPs) are homozygous, 173 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 12: 72.468 % (20618 of 28451 SNPs) are homozygous, 148 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 13: 72.951 % (15815 of 21679 SNPs) are homozygous, 93 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 14: 71.459 % (13360 of 18696 SNPs) are homozygous, 99 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 15: 73.245 % (13390 of 18281 SNPs) are homozygous, 98 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 16: 73.379 % (14088 of 19199 SNPs) are homozygous, 142 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 17: 75.292 % (14112 of 18743 SNPs) are homozygous, 198 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 18: 69.879 % (11523 of 16490 SNPs) are homozygous, 63 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 19: 75.419 % ( 9806 of 13002 SNPs) are homozygous, 196 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 20: 72.216 % (10467 of 14494 SNPs) are homozygous, 73 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 21: 69.980 % ( 5921 of 8461 SNPs) are homozygous, 58 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 22: 71.653 % ( 6519 of 9098 SNPs) are homozygous, 89 No-Calls, 0 heterozygous SNPs treated as homozygous

    Chr X: 2.552 % ( 497 of 19478 SNPs) are homozygous, 288 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr Y: 2302 SNPs, 1039 No-Calls, 0 heterozygous SNPs treated as homozygous
    mtDNA : 5075 SNPs, 357 No-Calls, 0 heterozygous SNPs treated as homozygous

    Total autosomal (Chr 1-22): 0.672 % ( 3866 of 575032 SNPs) are NoCalls
    Total autosomal (Chr 1-22): 28.354 % (163045 of 575032 SNPs) are Heterozygous (this tally excludes 4 heterozygous SNPs that were treated as homozygous)
    Total autosomal (Chr 1-22): 71.646 % (411987 of 575032 SNPs) are Homozygous (this tally includes 4 heterozygous SNPs that were treated as homozygous)




    Sister:
    Chr 1 has a No-Call run of length 14 from position 94466392 to position 94466615 ( 0.22 Kb)
    Chr 1 has a No-Call run of length 22 from position 94486794 to position 94487468 ( 0.67 Kb)
    Chr 1 has a No-Call run of length 10 from position 94494961 to position 94495188 ( 0.23 Kb)
    Chr 1 has a No-Call run of length 16 from position 94508342 to position 94508919 ( 0.58 Kb)
    Chr 1 has a No-Call run of length 10 from position 94512478 to position 94512533 ( 0.06 Kb)
    Chr 1 has a No-Call run of length 16 from position 94520718 to position 94522284 ( 1.57 Kb)
    Chr 1 has a No-Call run of length 15 from position 94526092 to position 94526317 ( 0.23 Kb)
    Chr 1 has a No-Call run of length 13 from position 94528148 to position 94528281 ( 0.13 Kb)
    Chr 1 has a No-Call run of length 13 from position 94543245 to position 94544230 ( 0.98 Kb)
    Chr 1 has a No-Call run of length 18 from position 94546067 to position 94546285 ( 0.22 Kb)
    Chr 1 has a No-Call run of length 10 from position 94564372 to position 94564462 ( 0.09 Kb)
    Chr 1 has a No-Call run of length 14 from position 155205490 to position 155205632 ( 0.14 Kb)
    Chr 1 has a No-Call run of length 15 from position 155207148 to position 155208387 ( 1.24 Kb)
    Chr 1 has a No-Call run of length 18 from position 156084782 to position 156084998 ( 0.22 Kb)
    Chr 1 has a No-Call run of length 14 from position 156104600 to position 156104756 ( 0.16 Kb)
    Chr 1 has a No-Call run of length 13 from position 156105704 to position 156105901 ( 0.20 Kb)
    Chr 1 has a No-Call run of length 15 from position 156106204 to position 156106824 ( 0.62 Kb)
    Chr 1 has a No-Call run of length 11 from position 156106909 to position 156107462 ( 0.55 Kb)
    Chr 1 has a No-Call run of length 19 from position 161275900 to position 161277185 ( 1.28 Kb)
    Chr 1 has a No-Call run of length 22 from position 197396856 to position 197411366 (14.51 Kb)
    Chr 1 has a No-Call run of length 10 from position 229567305 to position 229568856 ( 1.55 Kb)
    Chr 1 has a No-Call run of length 11 from position 230846110 to position 230846586 ( 0.48 Kb)
    Chr 2 has a No-Call run of length 17 from position 47630358 to position 47630517 ( 0.16 Kb)
    Chr 2 has a No-Call run of length 14 from position 47635547 to position 47635657 ( 0.11 Kb)
    Chr 2 has a No-Call run of length 12 from position 47635672 to position 47637325 ( 1.65 Kb)
    Chr 2 has a No-Call run of length 11 from position 47637374 to position 47637431 ( 0.06 Kb)
    Chr 2 has a No-Call run of length 46 from position 47637443 to position 47643450 ( 6.01 Kb)
    Chr 2 has a No-Call run of length 14 from position 47643481 to position 47643568 ( 0.09 Kb)
    Chr 2 has a No-Call run of length 12 from position 47656890 to position 47656969 ( 0.08 Kb)
    Chr 2 has a No-Call run of length 19 from position 47656986 to position 47657079 ( 0.09 Kb)
    Chr 2 has a No-Call run of length 13 from position 47672695 to position 47672783 ( 0.09 Kb)
    Chr 2 has a No-Call run of length 14 from position 47693852 to position 47693947 ( 0.10 Kb)
    Chr 2 has a No-Call run of length 22 from position 47702163 to position 47702285 ( 0.12 Kb)
    Chr 2 has a No-Call run of length 14 from position 47702293 to position 47702410 ( 0.12 Kb)
    Chr 2 has a No-Call run of length 37 from position 47703501 to position 47703704 ( 0.20 Kb)
    Chr 2 has a No-Call run of length 40 from position 47705428 to position 47708010 ( 2.58 Kb)
    Chr 2 has a No-Call run of length 15 from position 48025773 to position 48026275 ( 0.50 Kb)
    Chr 2 has a No-Call run of length 48 from position 48026312 to position 48027361 ( 1.05 Kb)
    Chr 2 has a No-Call run of length 13 from position 48027424 to position 48027671 ( 0.25 Kb)
    Chr 2 has a No-Call run of length 25 from position 48027763 to position 48028263 ( 0.50 Kb)
    Chr 2 has a No-Call run of length 26 from position 48032123 to position 48033750 ( 1.63 Kb)
    Chr 2 has a No-Call run of length 19 from position 48915062 to position 48915833 ( 0.77 Kb)
    Chr 2 has a No-Call run of length 12 from position 219525813 to position 219528760 ( 2.95 Kb)
    Chr 2 has a No-Call run of length 10 from position 220285661 to position 220286137 ( 0.48 Kb)
    Chr 3 has a No-Call run of length 23 from position 10183719 to position 10188328 ( 4.61 Kb)
    Chr 3 has a No-Call run of length 11 from position 10191470 to position 10191605 ( 0.14 Kb)
    Chr 3 has a No-Call run of length 23 from position 37035041 to position 37035154 ( 0.11 Kb)
    Chr 3 has a No-Call run of length 43 from position 37038115 to position 37042537 ( 4.42 Kb)
    Chr 3 has a No-Call run of length 28 from position 37045903 to position 37050323 ( 4.42 Kb)
    Chr 3 has a No-Call run of length 11 from position 37053318 to position 37053545 ( 0.23 Kb)
    Chr 3 has a No-Call run of length 35 from position 37053586 to position 37059091 ( 5.50 Kb)
    Chr 3 has a No-Call run of length 20 from position 37061854 to position 37067239 ( 5.38 Kb)
    Chr 3 has a No-Call run of length 22 from position 37067314 to position 37067495 ( 0.18 Kb)
    Chr 3 has a No-Call run of length 13 from position 37070286 to position 37070414 ( 0.13 Kb)
    Chr 3 has a No-Call run of length 32 from position 37081679 to position 37089011 ( 7.33 Kb)
    Chr 3 has a No-Call run of length 17 from position 37089023 to position 37089109 ( 0.09 Kb)
    Chr 3 has a No-Call run of length 19 from position 37089153 to position 37090069 ( 0.92 Kb)
    Chr 3 has a No-Call run of length 23 from position 37090403 to position 37092015 ( 1.61 Kb)
    Chr 3 has a No-Call run of length 13 from position 122002611 to position 122003442 ( 0.83 Kb)
    Chr 3 has a No-Call run of length 29 from position 129247620 to position 129261688 (14.07 Kb)
    Chr 4 has a No-Call run of length 13 from position 74270112 to position 74275191 ( 5.08 Kb)
    Chr 4 has a No-Call run of length 14 from position 74280762 to position 74283961 ( 3.20 Kb)
    Chr 5 has a No-Call run of length 13 from position 69175823 to position 70305696 (1129.87 Kb)
    Chr 5 has a No-Call run of length 11 from position 149357613 to position 149361189 ( 3.58 Kb)
    Chr 6 has a No-Call run of length 13 from position 31323029 to position 31324153 ( 1.12 Kb)
    Chr 6 has a No-Call run of length 11 from position 31827667 to position 31830485 ( 2.82 Kb)
    Chr 6 has a No-Call run of length 20 from position 42672158 to position 42672347 ( 0.19 Kb)
    Chr 6 has a No-Call run of length 17 from position 42689519 to position 42689697 ( 0.18 Kb)
    Chr 6 has a No-Call run of length 11 from position 121768025 to position 121768574 ( 0.55 Kb)
    Chr 7 has a No-Call run of length 13 from position 6026543 to position 6026605 ( 0.06 Kb)
    Chr 7 has a No-Call run of length 11 from position 19155531 to position 19156863 ( 1.33 Kb)
    Chr 7 has a No-Call run of length 10 from position 75612857 to position 75614511 ( 1.65 Kb)
    Chr 7 has a No-Call run of length 40 from position 94034995 to position 94039134 ( 4.14 Kb)
    Chr 7 has a No-Call run of length 22 from position 94039553 to position 94040459 ( 0.91 Kb)
    Chr 7 has a No-Call run of length 27 from position 94041389 to position 94043252 ( 1.86 Kb)
    Chr 7 has a No-Call run of length 31 from position 94049545 to position 94051247 ( 1.70 Kb)
    Chr 7 has a No-Call run of length 11 from position 94052278 to position 94052435 ( 0.16 Kb)
    Chr 7 has a No-Call run of length 25 from position 94054426 to position 94055844 ( 1.42 Kb)
    Chr 7 has a No-Call run of length 19 from position 94056320 to position 94057166 ( 0.85 Kb)
    Chr 7 has a No-Call run of length 10 from position 117227832 to position 117227869 ( 0.04 Kb)
    Chr 7 has a No-Call run of length 11 from position 142457785 to position 142460832 ( 3.05 Kb)
    Chr 8 has a No-Call run of length 13 from position 143956369 to position 143958423 ( 2.05 Kb)
    Chr 9 has a No-Call run of length 12 from position 21970994 to position 21971191 ( 0.20 Kb)
    Chr 10 has a No-Call run of length 11 from position 89690847 to position 89692985 ( 2.14 Kb)
    Chr 10 has a No-Call run of length 10 from position 90773874 to position 90774113 ( 0.24 Kb)
    Chr 10 has a No-Call run of length 11 from position 104591623 to position 104593831 ( 2.21 Kb)
    Chr 10 has a No-Call run of length 11 from position 123276856 to position 123276974 ( 0.12 Kb)
    Chr 10 has a No-Call run of length 13 from position 126091571 to position 126097466 ( 5.89 Kb)
    Chr 11 has a No-Call run of length 11 from position 2181128 to position 2182186 ( 1.06 Kb)
    Chr 11 has a No-Call run of length 42 from position 5246715 to position 5247102 ( 0.39 Kb)
    Chr 11 has a No-Call run of length 81 from position 5247806 to position 5248154 ( 0.35 Kb)
    Chr 11 has a No-Call run of length 17 from position 5248234 to position 5248329 ( 0.10 Kb)
    Chr 11 has a No-Call run of length 31 from position 5254237 to position 5255572 ( 1.33 Kb)
    Chr 11 has a No-Call run of length 43 from position 5269624 to position 5271298 ( 1.67 Kb)
    Chr 11 has a No-Call run of length 10 from position 17415842 to position 17417206 ( 1.36 Kb)
    Chr 11 has a No-Call run of length 13 from position 31815627 to position 31824317 ( 8.69 Kb)
    Chr 11 has a No-Call run of length 10 from position 32413521 to position 32414263 ( 0.74 Kb)
    Chr 11 has a No-Call run of length 20 from position 61717863 to position 61719366 ( 1.50 Kb)
    Chr 11 has a No-Call run of length 11 from position 61719400 to position 61722637 ( 3.24 Kb)
    Chr 11 has a No-Call run of length 14 from position 61722648 to position 61723364 ( 0.72 Kb)
    Chr 11 has a No-Call run of length 11 from position 61724330 to position 61724411 ( 0.08 Kb)
    Chr 11 has a No-Call run of length 11 from position 61724417 to position 61724472 ( 0.06 Kb)
    Chr 11 has a No-Call run of length 25 from position 61724853 to position 61725733 ( 0.88 Kb)
    Chr 11 has a No-Call run of length 21 from position 88911352 to position 88911689 ( 0.34 Kb)
    Chr 11 has a No-Call run of length 12 from position 88924367 to position 88924532 ( 0.17 Kb)
    Chr 11 has a No-Call run of length 10 from position 116706664 to position 116707337 ( 0.67 Kb)
    Chr 11 has a No-Call run of length 17 from position 118959348 to position 118962225 ( 2.88 Kb)
    Chr 11 has a No-Call run of length 12 from position 118962834 to position 118963668 ( 0.83 Kb)
    Chr 12 has a No-Call run of length 10 from position 5021064 to position 5021793 ( 0.73 Kb)
    Chr 12 has a No-Call run of length 11 from position 6058282 to position 6059041 ( 0.76 Kb)
    Chr 12 has a No-Call run of length 18 from position 6127580 to position 6127795 ( 0.21 Kb)
    Chr 12 has a No-Call run of length 13 from position 6128161 to position 6128436 ( 0.28 Kb)
    Chr 12 has a No-Call run of length 40 from position 6128449 to position 6128882 ( 0.43 Kb)
    Chr 12 has a No-Call run of length 11 from position 6131126 to position 6135194 ( 4.07 Kb)
    Chr 12 has a No-Call run of length 10 from position 6140660 to position 6143966 ( 3.31 Kb)
    Chr 12 has a No-Call run of length 10 from position 6153536 to position 6153615 ( 0.08 Kb)
    Chr 12 has a No-Call run of length 13 from position 6166038 to position 6167213 ( 1.18 Kb)
    Chr 12 has a No-Call run of length 10 from position 52306964 to position 52310003 ( 3.04 Kb)
    Chr 12 has a No-Call run of length 16 from position 52908949 to position 52910899 ( 1.95 Kb)
    Chr 12 has a No-Call run of length 13 from position 52911412 to position 52912904 ( 1.49 Kb)
    Chr 12 has a No-Call run of length 19 from position 52913525 to position 52913662 ( 0.14 Kb)
    Chr 12 has a No-Call run of length 11 from position 53070065 to position 53070135 ( 0.07 Kb)
    Chr 12 has a No-Call run of length 13 from position 53073540 to position 53073912 ( 0.37 Kb)
    Chr 12 has a No-Call run of length 16 from position 103237404 to position 103237466 ( 0.06 Kb)
    Chr 12 has a No-Call run of length 23 from position 103237484 to position 103237560 ( 0.08 Kb)
    Chr 12 has a No-Call run of length 39 from position 103238082 to position 103238215 ( 0.13 Kb)
    Chr 12 has a No-Call run of length 16 from position 103240682 to position 103240736 ( 0.05 Kb)
    Chr 12 has a No-Call run of length 16 from position 103245464 to position 103245536 ( 0.07 Kb)
    Chr 12 has a No-Call run of length 14 from position 103246588 to position 103246612 ( 0.02 Kb)
    Chr 12 has a No-Call run of length 29 from position 103246617 to position 103246698 ( 0.08 Kb)
    Chr 12 has a No-Call run of length 10 from position 103246708 to position 103246730 ( 0.02 Kb)
    Chr 12 has a No-Call run of length 29 from position 103248926 to position 103249007 ( 0.08 Kb)
    Chr 12 has a No-Call run of length 13 from position 103249009 to position 103249116 ( 0.11 Kb)
    Chr 12 has a No-Call run of length 21 from position 103288534 to position 103288709 ( 0.17 Kb)
    Chr 12 has a No-Call run of length 12 from position 103306563 to position 103306620 ( 0.06 Kb)
    Chr 12 has a No-Call run of length 40 from position 133532874 to position 133680699 (147.82 Kb)
    Chr 13 has a No-Call run of length 12 from position 20763452 to position 20763590 ( 0.14 Kb)
    Chr 14 has a No-Call run of length 10 from position 23883224 to position 23886383 ( 3.16 Kb)
    Chr 14 has a No-Call run of length 16 from position 23891501 to position 23897088 ( 5.59 Kb)
    Chr 14 has a No-Call run of length 11 from position 23897792 to position 23900859 ( 3.07 Kb)
    Chr 14 has a No-Call run of length 12 from position 73637521 to position 73637756 ( 0.23 Kb)
    Chr 14 has a No-Call run of length 33 from position 73640279 to position 73653628 (13.35 Kb)
    Chr 14 has a No-Call run of length 25 from position 73659355 to position 73659570 ( 0.21 Kb)
    Chr 14 has a No-Call run of length 20 from position 73664748 to position 73664825 ( 0.08 Kb)
    Chr 14 has a No-Call run of length 20 from position 73683834 to position 73685908 ( 2.07 Kb)
    Chr 14 has a No-Call run of length 19 from position 81609330 to position 81610417 ( 1.09 Kb)
    Chr 15 has a No-Call run of length 10 from position 48729223 to position 48738902 ( 9.68 Kb)
    Chr 15 has a No-Call run of length 11 from position 72640459 to position 72642919 ( 2.46 Kb)
    Chr 16 has a No-Call run of length 138 from position 221986 to position 223675 ( 1.69 Kb)
    Chr 16 has a No-Call run of length 30 from position 226720 to position 227402 ( 0.68 Kb)
    Chr 16 has a No-Call run of length 19 from position 2105401 to position 2106246 ( 0.84 Kb)
    Chr 16 has a No-Call run of length 11 from position 2110656 to position 2110791 ( 0.14 Kb)
    Chr 16 has a No-Call run of length 11 from position 2111885 to position 2112496 ( 0.61 Kb)
    Chr 16 has a No-Call run of length 15 from position 2113008 to position 2114403 ( 1.40 Kb)
    Chr 16 has a No-Call run of length 17 from position 2120429 to position 2121531 ( 1.10 Kb)
    Chr 16 has a No-Call run of length 17 from position 2121916 to position 2122354 ( 0.44 Kb)
    Chr 16 has a No-Call run of length 16 from position 2122880 to position 2124252 ( 1.37 Kb)
    Chr 16 has a No-Call run of length 10 from position 2124268 to position 2124400 ( 0.13 Kb)
    Chr 16 has a No-Call run of length 14 from position 2126070 to position 2126426 ( 0.36 Kb)
    Chr 16 has a No-Call run of length 10 from position 2129084 to position 2129172 ( 0.09 Kb)
    Chr 16 has a No-Call run of length 16 from position 2129275 to position 2130189 ( 0.91 Kb)
    Chr 16 has a No-Call run of length 13 from position 2134521 to position 2134733 ( 0.21 Kb)
    Chr 16 has a No-Call run of length 46 from position 2135306 to position 2136858 ( 1.55 Kb)
    Chr 16 has a No-Call run of length 11 from position 2138097 to position 2138252 ( 0.15 Kb)
    Chr 16 has a No-Call run of length 11 from position 16248495 to position 16248772 ( 0.28 Kb)
    Chr 16 has a No-Call run of length 10 from position 16248800 to position 16248876 ( 0.08 Kb)
    Chr 16 has a No-Call run of length 12 from position 16253351 to position 16253443 ( 0.09 Kb)
    Chr 16 has a No-Call run of length 12 from position 16256941 to position 16258625 ( 1.68 Kb)
    Chr 16 has a No-Call run of length 18 from position 75512688 to position 75513675 ( 0.99 Kb)
    Chr 17 has a No-Call run of length 10 from position 7573948 to position 7577120 ( 3.17 Kb)
    Chr 17 has a No-Call run of length 12 from position 7906654 to position 7909738 ( 3.08 Kb)
    Chr 17 has a No-Call run of length 15 from position 7918676 to position 7919565 ( 0.89 Kb)
    Chr 17 has a No-Call run of length 11 from position 38975817 to position 38978381 ( 2.56 Kb)
    Chr 17 has a No-Call run of length 15 from position 39724436 to position 39728029 ( 3.59 Kb)
    Chr 17 has a No-Call run of length 32 from position 39739509 to position 39742741 ( 3.23 Kb)
    Chr 17 has a No-Call run of length 10 from position 40690709 to position 40695952 ( 5.24 Kb)
    Chr 17 has a No-Call run of length 19 from position 42428095 to position 42428926 ( 0.83 Kb)
    Chr 17 has a No-Call run of length 12 from position 42428980 to position 42429497 ( 0.52 Kb)
    Chr 17 has a No-Call run of length 10 from position 42987997 to position 42988739 ( 0.74 Kb)
    Chr 17 has a No-Call run of length 15 from position 42990789 to position 42992668 ( 1.88 Kb)
    Chr 17 has a No-Call run of length 18 from position 44087666 to position 44087793 ( 0.13 Kb)
    Chr 17 has a No-Call run of length 12 from position 44095989 to position 44096112 ( 0.12 Kb)
    Chr 17 has a No-Call run of length 11 from position 48262867 to position 48263747 ( 0.88 Kb)
    Chr 17 has a No-Call run of length 33 from position 48264025 to position 48265343 ( 1.32 Kb)
    Chr 17 has a No-Call run of length 106 from position 48265512 to position 48269229 ( 3.72 Kb)
    Chr 17 has a No-Call run of length 27 from position 48270017 to position 48271404 ( 1.39 Kb)
    Chr 17 has a No-Call run of length 55 from position 48271709 to position 48273026 ( 1.32 Kb)
    Chr 17 has a No-Call run of length 28 from position 48273523 to position 48274031 ( 0.51 Kb)
    Chr 17 has a No-Call run of length 18 from position 48274366 to position 48275128 ( 0.76 Kb)
    Chr 17 has a No-Call run of length 15 from position 48275344 to position 48275866 ( 0.52 Kb)
    Chr 17 has a No-Call run of length 12 from position 54671688 to position 54672363 ( 0.68 Kb)
    Chr 17 has a No-Call run of length 11 from position 61995269 to position 61995818 ( 0.55 Kb)
    Chr 18 has a No-Call run of length 23 from position 29172884 to position 29175210 ( 2.33 Kb)
    Chr 18 has a No-Call run of length 10 from position 58038633 to position 58039060 ( 0.43 Kb)
    Chr 19 has a No-Call run of length 25 from position 11210928 to position 11218190 ( 7.26 Kb)
    Chr 20 has a No-Call run of length 10 from position 4680398 to position 4680516 ( 0.12 Kb)
    Chr 21 has a No-Call run of length 10 from position 14998515 to position 15165769 (167.25 Kb)
    Chr 21 has a No-Call run of length 14 from position 27264073 to position 27264170 ( 0.10 Kb)
    Chr 21 has a No-Call run of length 12 from position 33032095 to position 33038809 ( 6.71 Kb)
    Chr 22 has a No-Call run of length 14 from position 28217846 to position 28250810 (32.96 Kb)
    Chr 22 has a No-Call run of length 13 from position 33069928 to position 33087509 (17.58 Kb)
    Chr 22 has a No-Call run of length 10 from position 51065435 to position 51065808 ( 0.37 Kb)
    Chr X has a No-Call run of length 26007 from position 62321 to position 155236747 (155174.43 Kb)
    Chr Y has a No-Call run of length 1766 from position 2649694 to position 59032809 (56383.11 Kb)
    mtDNA has a No-Call run of length 2458 from position 3 to position 16567 (16.56 Kb)

    Chr 1 has a ROH of length 271 from position 45795027 to position 46938837 ( 1.14 Mb)
    Chr 1 has a ROH of length 218 from position 58918699 to position 59552704 ( 0.63 Mb)
    Chr 1 has a ROH of length 285 from position 60233747 to position 60869362 ( 0.64 Mb)
    Chr 1 has a ROH of length 362 from position 88457516 to position 89723344 ( 1.27 Mb)
    Chr 1 has a ROH of length 345 from position 94408908 to position 94509045 ( 0.10 Mb) (1 heterozygous SNPs treated as homozygous)
    Chr 1 has a ROH of length 206 from position 101843254 to position 102292385 ( 0.45 Mb)
    Chr 1 has a ROH of length 227 from position 145742000 to position 147007372 ( 1.27 Mb)
    Chr 1 has a ROH of length 307 from position 173509365 to position 175109884 ( 1.60 Mb)
    Chr 1 has a ROH of length 235 from position 219055281 to position 219742768 ( 0.69 Mb)
    Chr 2 has a ROH of length 200 from position 17563549 to position 18160897 ( 0.60 Mb)
    Chr 3 has a ROH of length 231 from position 12314846 to position 12470043 ( 0.16 Mb)
    Chr 3 has a ROH of length 219 from position 103919543 to position 104580647 ( 0.66 Mb)
    Chr 4 has a ROH of length 569 from position 29446907 to position 31370788 ( 1.92 Mb)
    Chr 5 has a ROH of length 307 from position 39435224 to position 40321158 ( 0.89 Mb)
    Chr 5 has a ROH of length 203 from position 51717417 to position 52178056 ( 0.46 Mb)
    Chr 5 has a ROH of length 263 from position 65599040 to position 66275284 ( 0.68 Mb)
    Chr 5 has a ROH of length 256 from position 112324789 to position 113012707 ( 0.69 Mb)
    Chr 6 has a ROH of length 298 from position 18418708 to position 19359154 ( 0.94 Mb)
    Chr 6 has a ROH of length 236 from position 44548984 to position 45405777 ( 0.86 Mb)
    Chr 7 has a ROH of length 211 from position 7355509 to position 7805729 ( 0.45 Mb)
    Chr 7 has a ROH of length 249 from position 99266443 to position 99758136 ( 0.49 Mb)
    Chr 7 has a ROH of length 279 from position 117052915 to position 117450792 ( 0.40 Mb)
    Chr 8 has a ROH of length 200 from position 86513414 to position 87635451 ( 1.12 Mb)
    Chr 11 has a ROH of length 278 from position 8337966 to position 9171775 ( 0.83 Mb)
    Chr 11 has a ROH of length 223 from position 11082966 to position 11361458 ( 0.28 Mb)
    Chr 11 has a ROH of length 294 from position 26554127 to position 27219795 ( 0.67 Mb)
    Chr 11 has a ROH of length 263 from position 36285390 to position 36861230 ( 0.58 Mb)
    Chr 11 has a ROH of length 218 from position 116589127 to position 117102648 ( 0.51 Mb)
    Chr 12 has a ROH of length 229 from position 19016864 to position 19701039 ( 0.68 Mb)
    Chr 12 has a ROH of length 282 from position 23742654 to position 24295876 ( 0.55 Mb)
    Chr 12 has a ROH of length 219 from position 81861791 to position 82585022 ( 0.72 Mb)
    Chr 13 has a ROH of length 310 from position 96186575 to position 97519611 ( 1.33 Mb)
    Chr 14 has a ROH of length 263 from position 46361884 to position 47454901 ( 1.09 Mb)
    Chr 15 has a ROH of length 344 from position 42703537 to position 44598544 ( 1.90 Mb)
    Chr 16 has a ROH of length 386 from position 66708481 to position 68317061 ( 1.61 Mb)
    Chr 16 has a ROH of length 236 from position 70833405 to position 72007232 ( 1.17 Mb)
    Chr 17 has a ROH of length 298 from position 30226738 to position 31433639 ( 1.21 Mb)
    Chr 17 has a ROH of length 283 from position 48232184 to position 48273348 ( 0.04 Mb)
    Chr 18 has a ROH of length 259 from position 25918380 to position 26873513 ( 0.96 Mb)
    Chr 20 has a ROH of length 224 from position 33793159 to position 34848116 ( 1.05 Mb)
    Chr 21 has a ROH of length 324 from position 26121156 to position 27255117 ( 1.13 Mb)
    Chr 22 has a ROH of length 211 from position 28301743 to position 29361159 ( 1.06 Mb)
    Chr 22 has a ROH of length 202 from position 35414540 to position 35789263 ( 0.37 Mb)
    Chr X has a ROH of length 26007 from position 62321 to position 155236747 (155.17 Mb)
    Chr Y has a ROH of length 1766 from position 2649694 to position 59032809 (56.38 Mb)
    mtDNA has a ROH of length 2458 from position 3 to position 16567 ( 0.02 Mb)
    Total ROH Mb: 247.42
    Total genome Mb: 3003.48
    The detected ROHs account for 8.238 % of the reported genome.

    The following percentages are for individual homozygous SNPs, not just those in ROHs.

    Chr 1: 72.759 % (55956 of 76906 SNPs) are homozygous, 2271 No-Calls, 1 heterozygous SNPs treated as homozygous
    Chr 2: 69.852 % (54026 of 77344 SNPs) are homozygous, 1630 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 3: 70.391 % (44547 of 63285 SNPs) are homozygous, 1356 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 4: 69.428 % (38197 of 55017 SNPs) are homozygous, 621 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 5: 70.708 % (39610 of 56019 SNPs) are homozygous, 1828 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 6: 70.232 % (44417 of 63243 SNPs) are homozygous, 1292 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 7: 70.562 % (35961 of 50964 SNPs) are homozygous, 1371 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 8: 68.881 % (33900 of 49215 SNPs) are homozygous, 622 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 9: 70.718 % (30386 of 42968 SNPs) are homozygous, 596 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 10: 70.710 % (35582 of 50321 SNPs) are homozygous, 713 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 11: 70.975 % (34043 of 47965 SNPs) are homozygous, 1529 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 12: 71.598 % (33740 of 47124 SNPs) are homozygous, 1509 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 13: 70.348 % (25380 of 36078 SNPs) are homozygous, 389 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 14: 70.790 % (21816 of 30818 SNPs) are homozygous, 532 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 15: 70.636 % (20060 of 28399 SNPs) are homozygous, 557 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 16: 71.681 % (21621 of 30163 SNPs) are homozygous, 1441 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 17: 72.855 % (19442 of 26686 SNPs) are homozygous, 1506 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 18: 71.478 % (19993 of 27971 SNPs) are homozygous, 352 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 19: 73.010 % (13531 of 18533 SNPs) are homozygous, 808 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 20: 69.275 % (16511 of 23834 SNPs) are homozygous, 475 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 21: 69.241 % ( 9281 of 13404 SNPs) are homozygous, 242 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr 22: 71.450 % (10073 of 14098 SNPs) are homozygous, 502 No-Calls, 0 heterozygous SNPs treated as homozygous

    Chr X: 100.000 % (26007 of 26007 SNPs) are homozygous, 26007 No-Calls, 0 heterozygous SNPs treated as homozygous
    Chr Y: 1766 SNPs, 1766 No-Calls, 0 heterozygous SNPs treated as homozygous
    mtDNA : 2458 SNPs, 2458 No-Calls, 0 heterozygous SNPs treated as homozygous

    Total autosomal (Chr 1-22): 2.380 % ( 22142 of 930355 SNPs) are NoCalls
    Total autosomal (Chr 1-22): 29.266 % (272282 of 930355 SNPs) are Heterozygous (this tally excludes 1 heterozygous SNPs that were treated as homozygous)
    Total autosomal (Chr 1-22): 70.734 % (658073 of 930355 SNPs) are Homozygous (this tally includes 1 heterozygous SNPs that were treated as homozygous)

  17. The Following User Says Thank You to Olymp For This Useful Post:

     Freb (01-20-2023)

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