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Thread: Post MDLP World-22 Admixture (Part 1)

  1. #1
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    Post Post MDLP World-22 Admixture (Part 1)

    .........
    Last edited by Kurd; 08-17-2016 at 12:57 AM.

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  3. #2
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    ............
    Last edited by Kurd; 08-17-2016 at 12:57 AM.

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  5. #3
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    African Union Ainu AchaemenidEmpire1 Kurdistan Star of David Dravida Nadu
    Admix Results (sorted):

    # Population Percent
    1 West-Asian 38.72
    2 Near_East 16.89
    3 Atlantic_Mediterranean_Neolithic 12.63
    4 Indian 11.39
    5 North-East-European 5.73
    6 Sub-Saharian 5.56
    7 Indo-Iranian 5.04
    8 Mesoamerican 0.96
    9 Austronesian 0.65
    10 North-European-Mesolithic 0.63
    11 Paleo-Siberian 0.58
    12 South-African 0.54
    13 South-America_Amerind 0.46
    14 North-Siberean 0.19
    15 Samoedic 0.03

    Single Population Sharing:

    # Population (source) Distance
    1 Iranian (derived) 9.54
    2 Azeri (derived) 13.44
    3 Kurd (derived) 14.29
    4 Turk (derived) 14.64
    5 Parsi (derived) 14.76
    6 Iraqi (derived) 14.82
    7 Jew-Uzbekistan (derived) 16.29
    8 Turkmen (derived) 17.32
    9 Jew_Kurd (derived) 17.59
    10 Syrian (derived) 18.46
    11 Jew_Tat (derived) 18.48
    12 Makrani (derived) 18.69
    13 Kumyk (derived) 18.76
    14 Jew_Azerbaijan (derived) 18.91
    15 Armenian (derived) 19.97
    16 Lebanese (derived) 19.97
    17 Jew_Iraqi (derived) 20.06
    18 Jew-Iran (derived) 20.25
    19 Cirkassian (derived) 20.29
    20 Tadjik (derived) 20.34



    Using 2 populations approximation:
    1 50% Jordanian +50% Pashtun @ 4.898008


    Using 3 populations approximation:
    1 50% Makrani +25% Palestinian +25% Tatar_Crim @ 3.108016

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    Here is admixture for an individual from Bandar Lengeh, S Central Coastal Iran:

    Admix Results (sorted):

    # Population Percent
    1 West-Asian 42.41
    2 Near_East 18.02
    3 Atlantic_Mediterranean_Neolithic 11.42
    4 Indian 10.09
    5 North-East-European 5.33
    6 Sub-Saharian 4.98
    7 Indo-Iranian 3.09
    8 Samoedic 1.95
    9 Pygmy 1.34


    Finished reading population data. 276 populations found.
    22 components mode.

    --------------------------------

    Least-squares method.

    Using 1 population approximation:
    1 Iranian @ 7.027721
    2 Azeri @ 12.209681
    3 Kurd @ 13.006738
    4 Parsi @ 14.873757
    5 Jew-Uzbekistan @ 15.004799
    6 Iraqi @ 15.349564
    7 Turk @ 15.588381
    8 Jew_Kurd @ 16.592844
    9 Jew_Tat @ 17.475550
    10 Jew_Azerbaijan @ 18.421282
    11 Kumyk @ 19.387396
    12 Jew-Iran @ 19.660955
    13 Turkmen @ 19.729494
    14 Jew_Iraqi @ 19.835733
    15 Armenian @ 19.843121
    16 Syrian @ 20.165697
    17 Makrani @ 20.367777
    18 Jew-Iraqi @ 20.621878
    19 Jew_Georgia @ 20.965078
    20 Georgian @ 21.688297

    Using 2 populations approximation:
    1 50% Lebanese +50% Makrani @ 4.335235


    Using 3 populations approximation:
    1 50% Azeri +25% Balochi +25% Yemen @ 3.283217


    Using 4 populations approximation:
    1 Jew_Azerbaijan + Lezgin + Sindhi + Yemen @ 2.721063
    2 Georgian_Laz + Parsi + Tadjik + Yemen @ 2.733877
    3 Chechen + Egyptian + Makrani + Parsi @ 2.766827
    4 Adygei + Brahui + Egyptian + Parsi @ 2.769471
    5 Balkarian + Brahui + Egyptian + Parsi @ 2.772270
    6 Chechen + Jew_Tat + Sindhi + Yemen @ 2.827445
    7 Jew_Tat + Lezgin + Sindhi + Yemen @ 2.835674
    8 Brahui + Chechen + Egyptian + Parsi @ 2.882403
    9 Brahui + Egyptian + NorthOssetian + Parsi @ 2.894899
    10 Chechen + Jew-Uzbekistan + Sindhi + Yemen @ 2.902480
    11 Adygei + Egyptian + Makrani + Parsi @ 2.908940
    12 Egyptian + Makrani + NorthOssetian + Parsi @ 2.933483
    13 Jew_Azerbaijan + Lak + Sindhi + Yemen @ 2.950268
    14 Bedouin + Georgian_Laz + Lak + Sindhi @ 2.952941
    15 Brahui + Egyptian + Kumyk + Parsi @ 2.954948
    16 Jew-Uzbekistan + Lezgin + Sindhi + Yemen @ 2.956057
    17 Bedouin + Georgian_Laz + Sindhi + Tabassaran @ 2.959122
    18 Egyptian + Georgian + Makrani + Parsi @ 2.971740
    19 Brahui + Egyptian + Kabardinian + Parsi @ 2.971858
    20 Iraqi + Jordanian + Lezgin + Sindhi @ 2.972242

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  9. #5
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    The following is a table showing the populations with the highest percentage of "Indo Iranian"
    POPULATION
    PROTO INDO IRANIAN
    Kalash
    84.4
    Burusho
    8.7
    Pashtun
    8.5
    Tadjik
    7.7
    Pathan
    7.6
    Sindhi
    7.4
    Balochi
    6.9
    Brahui
    6.6
    Makrani
    6.6
    Hindu
    6.5
    Indian
    4
    Norwegian_V
    3.8
    Parsi
    3.6
    Kurd
    3.2
    Azeri
    2.5
    Iranian
    2.5
    Iraqi
    2
    Lebanese
    1.7
    Swedish
    1.6
    Turk
    1.5
    Hungarian
    1
    Georgian
    0.8
    Yemen
    0.6
    Armenian
    0.6
    Greek_Cretan
    0.5
    Jordanian
    0.4
    Bedouin
    0.2
    Georgian_Laz
    0.2
    Last edited by Kurd; 01-22-2015 at 05:18 AM.

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  11. #6
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    Admix Results (sorted):

    # Population Percent
    1 West-Asian 39.22
    2 Indian 19.53
    3 North-East-European 12.77
    4 Indo-Iranian 7.76
    5 Atlantic_Mediterranean_Neolithic 4.87
    6 Near_East 3.44
    7 Samoedic 3.31
    8 North-European-Mesolithic 2.69
    9 North-Amerind 2.04
    10 South-America_Amerind 1.29
    11 Indo-Tibetan 1.10


    Finished reading population data. 276 populations found.
    22 components mode.

    --------------------------------

    Least-squares method.

    Using 1 population approximation:
    1 Pashtun @ 7.666590
    2 Tadjik @ 10.240953
    3 Pathan @ 10.529660
    4 Burusho @ 14.383930
    5 Balochi @ 15.656377
    6 Makrani @ 17.038118
    7 Brahui @ 18.106159
    8 Parsi @ 18.301308
    9 Sindhi @ 20.277481
    10 Turkmen @ 20.376228
    11 Kumyk @ 25.155216
    12 Tabassaran @ 26.280394
    13 Nogai @ 26.493690
    14 Azeri @ 26.572100
    15 Lezgin @ 26.826405
    16 Lak @ 26.871237
    17 Balkarian @ 27.073460
    18 Cirkassian @ 27.090433
    19 Iranian @ 27.268692
    20 Chechen @ 27.280479

    Using 2 populations approximation:
    1 50% Pathan +50% Tadjik @ 3.762469


    Using 3 populations approximation:
    1 50% Pathan +25% Tadjik +25% Tadjik @ 3.762469


    Using 4 populations approximation:
    1 Jew_India + Tadjik + Tadjik + Tadjik @ 3.617563
    2 Hindu + Lezgin + Tadjik + Tadjik @ 3.666125
    3 Pathan + Pathan + Tadjik + Tadjik @ 3.762469
    4 Hindu + Lak + Tadjik + Tadjik @ 3.840879
    5 Jew_India + Pashtun + Tadjik + Tadjik @ 3.904472
    6 Hindu + Tabassaran + Tadjik + Tadjik @ 3.934704
    7 Chechen + Hindu + Tadjik + Tadjik @ 4.057576
    8 Pashtun + Sindhi + Tadjik + Tadjik @ 4.219381
    9 Balochi + Pathan + Tadjik + Tadjik @ 4.297041
    10 Hindu + Pashtun + Tabassaran + Tadjik @ 4.308979
    11 Brahui + Brahui + Pathan + Tatar @ 4.324818
    12 Burusho + Pathan + Tadjik + Tadjik @ 4.357576
    13 Hindu + Georgian + Tadjik + Tadjik @ 4.387406
    14 Avar + Hindu + Tadjik + Tadjik @ 4.395862
    15 Burusho + Parsi + Tadjik + Tadjik @ 4.406223
    16 Sindhi + Tadjik + Tadjik + Tadjik @ 4.415235
    17 Hindu + Kumyk + Tadjik + Tadjik @ 4.437837
    18 Hindu + Lezgin + Pashtun + Tadjik @ 4.438826
    19 Pathan + Sindhi + Tadjik + Tadjik @ 4.454434
    20 Pashtun + Pathan + Pathan + Tatar_Crim @ 4.461469

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  13. #7
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    # Population Percent


    1 Indian 33.92
    2 West-Asian 31.04
    3 Indo-Iranian 8.77
    4 Samoedic 6.13
    5 North-East-European 5.5
    6 East-South-Asian 3.53
    7 Near_East 2.04
    8 North-European-Mesolithic 1.95
    9 North-Amerind 1.81
    10 Indo-Tibetan 1.66
    11 Austronesian 1.32
    12 Arctic-Amerind 0.83
    13 Mesoamerican 0.81
    14 East-Siberean 0.42
    15 Atlantic_Mediterranean_Neolithic 0.28

    Single Population Sharing:

    # Population (source) Distance
    1 Burusho (derived) 7.81
    2 Pathan (derived) 11.97
    3 Sindhi (derived) 12.44
    4 Jew_India (derived) 14.47
    5 Balochi (derived) 17.93
    6 Pashtun (derived) 19.29
    7 Hindu (derived) 21.83
    8 Makrani (derived) 22.16
    9 Brahui (derived) 22.67
    10 Parsi (derived) 24.18
    11 Tadjik (derived) 24.4
    12 Turkmen (derived) 28.68
    13 Roma (derived) 29.15
    14 Indian (derived) 29.16
    15 Uzbek (derived) 31.51
    16 Hazara (derived) 32.86
    17 Iranian (derived) 35.62
    18 Nogai (derived) 36.78
    19 Azeri (derived) 37.26
    20 Uygur (derived) 37.93
    Last edited by kenji.aryan; 01-22-2015 at 05:18 AM.

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  15. #8
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    The following table shows populations with the highest Indo Iranian component. I have included the Indian component for comparison. Some of the upcoming ensuing discussion and plot will be based on this data:
    POPULATION
    PROTO INDO IRANIAN
    INDIAN
    Kalash
    84.4
    3.3
    Burusho
    8.7
    29.4
    Pashtun
    8.5
    19.3
    Tadjik
    7.7
    11.2
    Pathan
    7.6
    28.2
    Sindhi
    7.4
    35.3
    Balochi
    6.9
    26.5
    Brahui
    6.6
    23.4
    Makrani
    6.6
    21.3
    Hindu
    6.5
    56.5
    Indian
    4
    60.9
    Norwegian_V
    3.8
    0
    Parsi
    3.6
    20.9
    Kurd
    3.2
    3.5
    Azeri
    2.5
    3
    Iranian
    2.5
    6.7
    Iraqi
    2
    2.8
    Lebanese
    1.7
    0.6
    Swedish
    1.6
    0.1
    Turk
    1.5
    1.6
    Hungarian
    1
    0.5
    Georgian
    0.8
    0
    Yemen
    0.6
    2.3
    Armenian
    0.6
    0.6
    Greek_Cretan
    0.5
    0.2
    Jordanian
    0.4
    0.4
    Bedouin
    0.2
    0.4
    Georgian_Laz
    0.2
    0



    EDIT: Besides "owning" the Indo Iranian component, Kalash have one of the highest (if not the highest) ANE scores according to some calculations. There may be a correlation between the Indo Iranianess or Kalashness of a population and its corresponding ANE score.I may plot the ratio of Kalash/ANE of some populations.

    The possibility certainly exists that the Kalash are remnants of a larger Kalash type group who spread "Kalash" or ANE to the NE and NE Europe (it is interesting that the population identified as Norwegian V has the highest "Kalash" score, whereas this component decreases as we move southward and westward in Europe)
    Last edited by Kurd; 01-22-2015 at 01:07 PM.

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  17. #9
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    African Union Ainu AchaemenidEmpire1 Kurdistan Star of David Dravida Nadu
    Kandahari Pashtun

    # Population Percent
    1 West-Asian 41.67
    2 Indian 18.10
    3 North-East-European 10.01
    4 Indo-Iranian 7.43
    5 Atlantic_Mediterranean_Neolithic 5.97
    6 Near_East 5.71
    7 Samoedic 3.79
    8 North-European-Mesolithic 1.79
    9 North-Amerind 1.12
    10 South-America_Amerind 1.09
    11 East-South-Asian 1.06


    Using 1 population approximation:
    1 Pashtun @ 7.373367
    2 Tadjik @ 11.264337
    3 Pathan @ 11.914203
    4 Balochi @ 13.888158
    5 Parsi @ 14.379761
    6 Makrani @ 14.602252
    7 Brahui @ 15.357545
    8 Burusho @ 15.941795
    9 Turkmen @ 18.824993
    10 Sindhi @ 20.979082
    11 Kumyk @ 22.634285
    12 Azeri @ 22.725178
    13 Iranian @ 23.247553
    14 Lezgin @ 24.675817
    15 Tabassaran @ 24.798187
    16 Balkarian @ 24.877811
    17 Kabardinian @ 24.957584
    18 Chechen @ 24.973455
    19 Cirkassian @ 25.036488
    20 Lak @ 25.092953

    Using 2 populations approximation:
    1 50% Parsi +50% Tadjik @ 4.578388


    Using 3 populations approximation:
    1 50% Pathan +25% Tadjik +25% Turk @ 3.226615


    Using 4 populations approximation:
    1 Iranian + Pathan + Pathan + Tadjik @ 2.372766
    2 Burusho + Kurd + Pathan + Tadjik @ 2.445048
    3 Azeri + Pathan + Pathan + Tadjik @ 2.455239
    4 Kurd + Pathan + Pathan + Tadjik @ 2.521580
    5 Azeri + Burusho + Pathan + Tadjik @ 2.592736
    6 Parsi + Pathan + Tadjik + Tadjik @ 2.883371
    7 Burusho + Iranian + Pathan + Tadjik @ 2.972752
    8 Burusho + Jew-Uzbekistan + Pathan + Tadjik @ 3.009230
    9 Jew-Uzbekistan + Pathan + Pathan + Tadjik @ 3.098452
    10 Burusho + Parsi + Tadjik + Tadjik @ 3.178530
    11 Burusho + Iranian + Pashtun + Tadjik @ 3.205842
    12 Pathan + Pathan + Tadjik + Turk @ 3.226615
    13 Azeri + Balochi + Burusho + Tadjik @ 3.247608
    14 Iranian + Pashtun + Pathan + Tadjik @ 3.251407
    15 Azeri + Pathan + Sindhi + Tadjik @ 3.299635
    16 Burusho + Jew_Tat + Pathan + Tadjik @ 3.324961
    17 Balochi + Burusho + Tadjik + Turk @ 3.387740
    18 Parsi + Sindhi + Tadjik + Tadjik @ 3.391261
    19 Balochi + Parsi + Tadjik + Tadjik @ 3.410753
    20 Balochi + Pathan + Tadjik + Turk @ 3.450826

    Done.

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  19. #10
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    MDLP World-22 Oracle results

    Admix Results (sorted):

    # Population Percent
    1 West-Asian 35.78
    2 Indian 31.98
    3 North-East-European 10.75
    4 Indo-Iranian 8.34
    5 Samoedic 3.19
    6 North-European-Mesolithic 2.57
    7 Near_East 1.84
    8 North-Amerind 1.82
    9 Indo-Tibetan 1.45
    10 Atlantic_Mediterranean_Neolithic 1.41
    11 East-Siberean 0.51
    12 South-America_Amerind 0.34
    13 Mesoamerican 0.02

    Single Population Sharing:

    # Population (source) Distance
    1 Pathan (derived) 6.52
    2 Burusho (derived) 6.88
    3 Sindhi (derived) 11.02
    4 Balochi (derived) 14.25
    5 Pashtun (derived) 14.27
    6 Jew_India (derived) 17.12
    7 Brahui (derived) 18.79
    8 Makrani (derived) 19.09
    9 Tadjik (derived) 20.14
    10 Parsi (derived) 21.03
    11 Hindu (derived) 25.37
    12 Turkmen (derived) 27.1
    13 Roma (derived) 27.97
    14 Uzbek (derived) 31.47
    15 Iranian (derived) 33.15
    16 Indian (derived) 33.64
    17 Nogai (derived) 33.82
    18 Kumyk (derived) 33.85
    19 Hazara (derived) 34.06
    20 Azeri (derived) 34.07

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 86.4% Pathan (derived) + 13.6% Indian (derived) @ 3.83
    2 82.8% Pathan (derived) + 17.2% Hindu (derived) @ 3.93
    3 93.1% Pathan (derived) + 6.9% Indian (ancestral) @ 4.01
    4 64.7% Pashtun (derived) + 35.3% Hindu (derived) @ 4.17
    5 83.6% Pashtun (derived) + 16.4% Indian (ancestral) @ 4.49
    6 56% Tadjik (derived) + 44% Hindu (derived) @ 4.54
    7 79.6% Pathan (derived) + 20.4% Jew_India (derived) @ 4.99
    8 57.9% Hindu (derived) + 42.1% Tabassaran (derived) @ 5.3
    9 58.2% Hindu (derived) + 41.8% Lak (derived) @ 5.41
    10 59% Hindu (derived) + 41% Avar (derived) @ 5.51
    11 55.3% Pathan (derived) + 44.7% Burusho (derived) @ 5.78
    12 58.2% Hindu (derived) + 41.8% Lezgin (derived) @ 5.86
    13 96.2% Burusho (derived) + 3.8% North-East-European (ancestral) @ 5.9
    14 95.6% Burusho (derived) + 4.4% Lithuanian (derived) @ 5.94
    15 95.3% Burusho (derived) + 4.7% Belarusian (derived) @ 5.94
    16 95.5% Burusho (derived) + 4.5% Lithuanian_V (derived) @ 5.96
    17 95.6% Burusho (derived) + 4.4% Latvian (derived) @ 5.98
    18 95.4% Burusho (derived) + 4.6% Russian (derived) @ 6.01
    19 95.3% Burusho (derived) + 4.7% Polish (derived) @ 6.01
    20 95.2% Burusho (derived) + 4.8% Polish_V (derived) @ 6.01

    Population Averages:

    https://docs.google.com/a/scu.edu/sp...zT1E5Ymc#gid=0

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