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Thread: Big Y results: the VCF file

  1. #1
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    Big Y results: the VCF file

    A member of one of the surname projects I manage has his Big Y results. I'm looking over his VCF. It's pretty straight forward, the positions and alleles are listed. But two questions: These are variants from what? From positions and values that are presently known and classified? The other question, What are the values in the ALT column?

    Thanks,
    Michael

  2. #2
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    Celtic, Goidelic
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    DF13>FGC5494>FGC5496
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    H11a2a>C12014T

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    Here is a nice review of what's in the VCF file.

    http://archiver.rootsweb.ancestry.co...-04/1397704949

    MJost
    148326, FGC-0FW1R, YSID6 & YF3272 R-DF13>FGC5494>*7448>*5496>*5521>*5511>*5539>*5538>* 5508>*5524
     
    Watterson USA GD1/67 & GD3/111, *5508+. GD1’s father’s sister-23andme pred. 3rd Cous w/ 0.91% DNA shared-3 seg. Largest on Chr1 w/non-Euro admix affirms my NPE paternal Watterson line via aDNA & YDNA. A 2nd pred. 4th cous has same DKA b. 1840's Georgia and MDKA d 1703 IOM. 3rd Cousin FtDNA FF is from the Watterson Ala. *5538+ b. IOM w/ GD6/67 & GD8/111 -SGD3. FGC5539+ a Scot-Ross GD13/111 -SGD8

  3. The Following 3 Users Say Thank You to MJost For This Useful Post:

     AJL (02-07-2015),  dp (02-07-2015),  Táltos (02-07-2015)

  4. #3
    Junior Member
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    Humboldt County, CA USA
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    Entirely white :(
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    R1a-YP355
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    H1a1

    Thanks. M!

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