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Thread: Post your Gedmatch calculator Gedrosia 12 results

  1. #1
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    Post your Gedmatch calculator Gedrosia 12 results

    I just wanted to share that I was pleased with the signal outputs and cross validation error of the run for my Gedrosia 12 calculator, so I decided to upload it to Gedmatch. It should be available for use within a week.

    I optimized the calculator for individuals of predominately South Asian and West Asian ancestry for inferring gedrosian Balochi admixture. Since those populations were mostly used to source allele frequencies, individuals with majority ancestry from outside those regions will most likely find this calculator less accurate and informative.

    In addition to the myriad of Indian tribal populations, the SC Asian populations, I also included about 5 Turkish groups, just to name a few.

    The Bronze age Steppe-Herder signal in this calculator reflects genetic Eurasian steppe admixture in excess of what is included in the Caucasus or Balochi signals. Some of the other signals I was pleased with were E African and SW Asian.

    I will inform when the calculator is up and running, so that our Asian members can give it a test ride.

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  3. #2
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    Thanks!!!!!

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    Great. Can we also get our official results?

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  7. #4
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    Quote Originally Posted by Kurd View Post
    I just wanted to share that I was pleased with the signal outputs and cross validation error of the run for my Gedrosia 12 calculator, so I decided to upload it to Gedmatch. It should be available for use within a week.

    I optimized the calculator for individuals of predominately South Asian and West Asian ancestry for inferring gedrosian Balochi admixture. Since those populations were mostly used to source allele frequencies, individuals with majority ancestry from outside those regions will most likely find this calculator less accurate and informative.

    In addition to the myriad of Indian tribal populations, the SC Asian populations, I also included about 5 Turkish groups, just to name a few.

    The Bronze age Steppe-Herder signal in this calculator reflects genetic Eurasian steppe admixture in excess of what is included in the Caucasus or Balochi signals. Some of the other signals I was pleased with were E African and SW Asian.

    I will inform when the calculator is up and running, so that our Asian members can give it a test ride.
    If there is "Turk_Trabzon" dataset in your 5 Turkish group let you know. That Turk_Trabzon" data set does not fit with real stats of Trabzon people from Turkey. I have never seen anyone from trabzon even close to Turk_Trabzon dataset. If you want i can provide you some (6-7) raw file from Trabzon.

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  9. #5
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    Quote Originally Posted by everest59 View Post
    Great. Can we also get our official results?
    Sure, as soon as the calculator is up

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  11. #6
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    Quote Originally Posted by Anabasis View Post
    If there is "Turk_Trabzon" dataset in your 5 Turkish group let you know. That Turk_Trabzon" data set does not fit with real stats of Trabzon people from Turkey. I have never seen anyone from trabzon even close to Turk_Trabzon dataset. If you want i can provide you some (6-7) raw file from Trabzon.
    I doubt that all Trabzon public samples are mislabeled, but what I will do is wait to see your oracles, and then move from there

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    Kurd, the calculator is up.

    Gedrosia K12

    Code:
    Population	 
    S_INDIAN	-    
    SUB_SAHARAN	-    
    EARLY_EUROPEAN_FARMERS	16.55%
    SW_ASIAN	29.00%
    W_SIBERIAN	-    
    SE_ASIAN	0.27%
    BALOCHI	13.33%
    SINTASHTA_STEPPE_HERDERS	0.40%
    INDO_TIBETAN	-    
    CAUCASUS	40.19%
    E_AFRICAN	-    
    E_SIBERIAN	0.26%
    Last edited by ZephyrousMandaru; 08-15-2015 at 04:48 PM.

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    Last edited by MfA; 08-15-2015 at 06:34 PM.
    E-M84>FGC18389>FGC18413>FGC18401>FGC18422>Y99171 tMRCA 2550ybp

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    Population
    S_INDIAN -
    SUB_SAHARAN 0.08%
    EARLY_EUROPEAN_FARMERS 31.68%
    SW_ASIAN 18.30%
    W_SIBERIAN 0.45%
    SE_ASIAN -
    BALOCHI 4.83%
    SINTASHTA_STEPPE_HERDERS 14.93%
    INDO_TIBETAN 0.67%
    CAUCASUS 26.90%
    E_AFRICAN 2.16%
    E_SIBERIAN -


    FTDNA


    Population
    S_INDIAN -
    SUB_SAHARAN -
    EARLY_EUROPEAN_FARMERS 31.25%
    SW_ASIAN 17.79%
    W_SIBERIAN 0.48%
    SE_ASIAN -
    BALOCHI 4.86%
    SINTASHTA_STEPPE_HERDERS 15.16%
    INDO_TIBETAN 1.30%
    CAUCASUS 27.22%
    E_AFRICAN 1.95%
    E_SIBERIAN -
    I can be certain of one thing, that I know nothing.

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    Population
    S_INDIAN 47.12%
    SUB_SAHARAN -
    EARLY_EUROPEAN_FARMERS 3.45%
    SW_ASIAN -
    W_SIBERIAN 1.98%
    SE_ASIAN 1.31%
    BALOCHI 26.41%
    SINTASHTA_STEPPE_HERDERS 7.64%
    INDO_TIBETAN 3.61%
    CAUCASUS 8.07%
    E_AFRICAN 0.39%
    E_SIBERIAN -

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