Hello,
I am wondering if the BAM file is available for sample HGDP00146 ? (from the Human Genome Diversity Project)
I have seen some HGDP samples on YFull.com ( In which they require the BAM file for their analysis )
I found the following links about the HGDP00146 sample:
ftp://ftp.cephb.fr/hgdp_supp14/
in the ( SNPlist.txt ) file.
and
ftp://ftp.cephb.fr/hgdp_supp10/Harvard_HGDP-CEPH/
It is in included in Panel 4 ( sample_panel4.txt )
I am not sure if the panel4.ped.gz or panel4.map.gz file can help in generating the BAM file for HGDP00146 ?