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Thread: Post ANE K6 Results

  1. #1
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    Post Post ANE K6 Results

    ANCIENT EURASIA K6 CALCULATOR Admixture Proportions

    The following is now available at Gedmatch. Various ancient genomes, including the newly sequenced ancient Iranian and Near- Eastern ones were used to source allele frequencies for the calculator's components.

    For a discussion on the various ancient genomes used here, please refer to the following papers:

    The genetic structure of the world's first farmers, Lazaridis et al, 2016. http://biorxiv.org/content/early/2016/06/16/059311
    The genetic history of Ice Age Europe, Fu et al, 2016, http://www.nature.com/nature/journal...ture17993.html
    Early Neolithic genomes from the eastern Fertile Crescent, Broushaki et al, 2016, http://science.sciencemag.org/content/early/2016/07/13/science.aaf7943<

    Clones of various ancients were utilized to help form some of the clusters, and make results somewhat consistent with results obtained using formal methods such as qpAdm.

    A brief description of the calculator's components:

    Ancestral North Eurasian (ANE): Upper-Paleolithic genomes from the Lake Baikal region of Siberia, identified as Malta, Afontogora 2, and Afontogora 3, dated to 17 to 24 kya, when Mammoths roamed the area, form the ANE cluster.

    Ancestral South Eurasian (ASE): This component is maximized in the Andamanese and Australian Aboriginals. These Eastern non-Africans are believed to have split from other out-of-African populations over 50 kya, and some related populations (ASI), are believed to have played a role in the ethnogenisis of South Asians.

    E Asian: This component is maximized in groups such as the Han and Dai.

    Natufian: This was an Epipaleolithic culture that existed from 12,500 to 9,500 BC in the area of Israel. They were derived about 50% from an original Out-of-Africa population, referred to as Basal Eurasians. If you are a European and show Natufian admixture, this does not imply that Natufians interacted with your ancestors. All it means is that Natufian like admixture was mediated to you via intermediaries, such as the early European Farmers from the Near East.

    Western European Hunter Gatherers (WHG): This component maximizes in ancient samples known as Villabruna, La Brana, Bichon, Loschbour, and Hungarian KO1, also collectively referred to as WHG.

    Sub-Saharan: Various African populations such as Yoruba and Esan were used to source the allele frequencies for this component.

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  3. #2
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    KURD C1

    [IMG][/IMG]


    # Population Percent
    1 Natufian 49.62
    2 Ancestral_North_Eurasian 34.5
    3 Ancestral_South_Eurasian 7.12
    4 West_European_Hunter_Gartherer 6.88
    5 Sub_Saharan 1.15
    1 Kurd_C @ 2.725618
    2 Iran_LN @ 3.293840
    3 Kurd_F @ 3.595020
    4 Iranian_Mazandarani @ 3.861643
    5 Iran_ChL @ 4.114489
    6 Iran_recent @ 4.557532
    7 Iranian @ 4.612491
    8 Iranian_Shirazi @ 4.948186
    9 Iran_N_WC1 @ 5.755764
    10 Iranian_Lori @ 5.767646
    11 Iran_N @ 7.058374
    12 Georgian @ 9.047995
    13 Assyrian @ 9.843997
    14 Azeri @ 10.040548
    15 Jew_Iranian @ 10.183269
    16 Jew_iraqi @ 10.726925
    17 Baloch_Iranian @ 13.070098
    18 Chechen @ 13.093052
    19 Lezgin @ 13.235285
    20 Adygei @ 13.548306
    Using 2 populations approximation:
    1 50% Iran_LN + 50% Kurd_C @ 1.539294
    Using 3 populations approximation:
    1 50% Assyrian + 25% Balochi + 25% Iran_LN @ 1.356906
    Using 4 populations approximation:
    1 Balochi + Iran_LN + Jew_Iranian + Jew_Iranian @ 0.937070
    2 Brahui + Iran_LN + Jew_Iranian + Jew_Iranian @ 1.057653
    3 Balochi + CHG + Jew_Iranian + Levant_BA @ 1.118010
    4 Assyrian + Balochi + Iran_LN + Jew_Iranian @ 1.127984
    5 Assyrian + Balochi + CHG + Levant_BA @ 1.140040
    6 Balochi + Iranian_Lori + Jew_Iranian + Jew_Iranian @ 1.152867
    7 Assyrian + Brahui + Iran_LN + Jew_Iranian @ 1.174170
    8 Brahui + Iranian_Lori + Jew_Iranian + Jew_Iranian @ 1.185848
    9 Balochi + Iran_LN + Jew_Iranian + Jew_iraqi @ 1.263360
    10 Assyrian + Brahui + CHG + Levant_BA @ 1.275133

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  5. #3
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    KURD C2

    [IMG][/IMG]


    # Population Percent
    1 Natufian 47.87
    2 Ancestral_North_Eurasian 31.56
    3 West_European_Hunter_Gartherer 9.75
    4 Ancestral_South_Eurasian 6.42
    5 East_Asian 3.86
    Using 1 population approximation:
    1 Iran_recent @ 2.083662
    2 Iranian @ 2.286302
    3 Iran_N_WC1 @ 2.673938
    4 Kurd_C @ 2.925520
    5 Azeri @ 5.180098
    6 Iranian_Mazandarani @ 5.522789
    7 Iranian_Shirazi @ 6.005912
    8 Kurd_F @ 6.500091
    9 Iran_ChL @ 6.788298
    10 Iran_LN @ 7.958719
    11 Georgian @ 8.372274
    12 Assyrian @ 9.265222
    13 Adygei @ 9.370182
    14 Iranian_Lori @ 9.396403
    15 Iran_N @ 9.457068
    16 Chechen @ 9.675858
    17 Jew_Iranian @ 9.777298
    18 Kumyk @ 10.312595
    19 Jew_iraqi @ 10.357589
    20 Lezgin @ 10.549453
    Using 2 populations approximation:
    1 50% Iran_N_WC1 + 50% Iranian @ 1.770212
    Using 3 populations approximation:
    1 50% Assyrian + 25% Assyrian + 25% Burusho @ 0.627683
    Using 4 populations approximation:
    1 Assyrian + Assyrian + Assyrian + Burusho @ 0.627683
    2 Assyrian + Assyrian + Burusho + Jew_Iranian @ 0.663582
    3 Iran_recent + Jew_Iranian + Jew_Iranian + Pashtun_Afghan @ 0.720049
    4 Azeri + Iran_ChL + Kalash + Levant_BA @ 0.720351
    5 Burusho + CHG + Levant_N + Steppe_EMBA @ 0.726750
    6 Burusho + CHG + Natufian + Steppe_EMBA @ 0.726750
    7 Burusho + Georgian + Jew_Iranian + Jew_Iranian @ 0.778928
    8 Jew_Iranian + Jew_iraqi + Sindhi + Turkish @ 0.805967
    9 Iran_ChL + Iran_recent + Levant_BA + Pashtun_Afghan @ 0.811903
    10 Assyrian + Burusho + Jew_Iranian + Jew_Iranian @ 0.820524

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  7. #4
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    KURD SE

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    # Population Percent
    1 Ancestral_North_Eurasian 42.8
    2 Natufian 36.82
    3 Ancestral_South_Eurasian 12.12
    4 East_Asian 5.91
    5 West_European_Hunter_Gartherer 2.34

    1 Balochi @ 3.72
    2 Brahui @ 4.35
    3 Kalash @ 5.98
    4 Pathan @ 6.37
    5 Makrani @ 6.42
    6 Baloch_Iranian @ 7.71
    7 Sindhi @ 9.06
    8 Pashtun_Afghan @ 9.52
    9 Punjabi @ 11.04
    10 CHG @ 11.17
    11 GujaratiA @ 12.59
    12 Iran_N @ 12.91
    13 Iranian_Lori @ 14.28
    14 Burusho @ 14.53
    15 Iranian_Mazandarani @ 14.62
    16 Iranian_Shirazi @ 15.30
    17 GujaratiB @ 15.33
    18 Iran_ChL @ 15.51
    1 Balochi + Kurd_SE + Kurd_SE + Kurd_SE @ 0.96
    2 Brahui + Kurd_SE + Kurd_SE + Kurd_SE @ 1.12
    3 CHG + Kurd_SE + Pashtun_Afghan + Sindhi @ 1.24
    4 Burusho + CHG + Iran_N + Sindhi @ 1.29
    5 Balochi + Burusho + CHG + Kurd_SE @ 1.37
    6 Burusho + CHG + Iran_ChL + Sindhi @ 1.41
    7 Brahui + Burusho + CHG + Kurd_SE @ 1.42
    8 Brahui + Kalash + Kurd_SE + Kurd_SE @ 1.42
    9 Kalash + Kurd_SE + Kurd_SE + Kurd_SE @ 1.43
    10 Burusho + CHG + Iranian_Lori + Punjabi @ 1.44

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  9. #5
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    European Union United Kingdom Pashtunistan
    Admix Results (sorted):

    # Population Percent
    1 Ancestral_North_Eurasian 41.08
    2 Natufian 33.17
    3 Ancestral_South_Eurasian 13.79
    4 East_Asian 7.49
    5 West_European_Hunter_Gartherer 4.42
    6 Sub_Saharan 0.04

    Code:
    Single Population Sharing:
    
    #	Population (source)	Distance
    1	Pathan	2.18
    2	Kalash	2.38
    3	Kurd_SE	5.2
    4	Pashtun_Afghan	5.97
    5	Sindhi	6.81
    6	Punjabi	7.46
    7	Balochi	7.75
    8	Brahui	8.53
    9	GujaratiA	8.72
    10	Makrani	10.22
    11	Burusho	10.25
    12	Baloch_Iranian	11.66
    13	GujaratiB	11.77
    14	Tajik	13.66
    15	CHG	15.86
    16	Iran_N	16.15
    17	GujaratiC	16.33
    18	Iranian_Mazandarani	17.47
    19	Iranian_Shirazi	17.78
    20	Iranian_Lori	17.95
    
    Mixed Mode Population Sharing:
    
    #	 	Primary Population (source)	Secondary Population (source)	Distance
    1	 	92.8%	Pathan	+	7.2%	Azeri	@	1.35
    2	 	93.5%	Pathan	+	6.5%	Balkar	@	1.48
    3	 	91.7%	Pathan	+	8.3%	Iranian_Mazandarani	@	1.5
    4	 	92.2%	Pathan	+	7.8%	Iran_ChL	@	1.51
    5	 	93.3%	Pathan	+	6.7%	Kurd_F	@	1.52
    6	 	92.9%	Pathan	+	7.1%	Iranian	@	1.52
    7	 	91.2%	Pathan	+	8.8%	Iran_N	@	1.52
    8	 	94.5%	Kalash	+	5.5%	Turkmen	@	1.54
    9	 	79%	Pathan	+	21%	Pashtun_Afghan	@	1.54
    10	 	76.5%	Pathan	+	23.5%	Kurd_SE	@	1.55
    11	 	92.2%	Pathan	+	7.8%	Iranian_Lori	@	1.56
    12	 	94.7%	Pathan	+	5.3%	Georgian	@	1.56
    13	 	94.9%	Pathan	+	5.1%	Turkish	@	1.57
    14	 	92.6%	Pathan	+	7.4%	Iran_recent	@	1.57
    15	 	94%	Pathan	+	6%	Adygei	@	1.57
    16	 	95.3%	Pathan	+	4.7%	Jew_iraqi	@	1.59
    17	 	93.3%	Pathan	+	6.7%	Iran_LN	@	1.59
    18	 	93.2%	Pathan	+	6.8%	Kurd_C	@	1.6
    19	 	95.2%	Pathan	+	4.8%	Assyrian	@	1.6
    20	 	92.3%	Pathan	+	7.7%	Iranian_Shirazi	@	1.6

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  11. #6
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    Y-DNA (P)
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    mtDNA (M)
    HV2a3
    Y-DNA (M)
    L-M27
    mtDNA (P)
    R0

    United States of America California Republic Canada India Punjab Sikh Empire Nishan Sahib
    Admix Results (sorted):

    # Population Percent
    1 Ancestral_North_Eurasian 45.68
    2 Natufian 28.92
    3 Ancestral_South_Eurasian 15.47
    4 East_Asian 8.28
    5 West_European_Hunter_Gartherer 1.64

     
    Single Population Sharing:

    # Population (source) Distance
    1 Punjabi 5.36
    2 Sindhi 6.18
    3 Pathan 6.29
    4 Kalash 6.84
    5 GujaratiA 7.51
    6 GujaratiB 8.37
    7 Kurd_SE 9.6
    8 Burusho 9.96
    9 Balochi 11.21
    10 Pashtun_Afghan 12
    11 Brahui 12.04
    12 GujaratiC 13.88
    13 Makrani 14.32
    14 GujaratiD 15.85
    15 Baloch_Iranian 16.12
    16 Punjabi_PJL 17.52
    17 CHG 17.99
    18 Tajik 18.83
    19 Iran_N 21.94
    20 Iranian_Lori 23.65

    Mixed Mode Population Sharing:

    # Primary Population (source) Secondary Population (source) Distance
    1 90.8% Sindhi + 9.2% EHG @ 3.3
    2 94% Punjabi + 6% AG2 @ 3.41
    3 94% Punjabi + 6% AG3 @ 3.41
    4 94% Punjabi + 6% MA1 @ 3.41
    5 92.5% Pathan + 7.5% AG2 @ 3.42
    6 92.5% Pathan + 7.5% AG3 @ 3.42
    7 92.5% Pathan + 7.5% MA1 @ 3.42
    8 92.8% Sindhi + 7.2% AG2 @ 3.55
    9 92.8% Sindhi + 7.2% AG3 @ 3.55
    10 92.8% Sindhi + 7.2% MA1 @ 3.55
    11 93.5% Punjabi + 6.5% EHG @ 3.98
    12 84.6% Punjabi + 15.4% CHG @ 4.31
    13 71.1% GujaratiB + 28.9% CHG @ 4.47
    14 92.6% Kalash + 7.4% MA1 @ 4.5
    15 92.6% Kalash + 7.4% AG2 @ 4.5
    16 92.6% Kalash + 7.4% AG3 @ 4.5
    17 75.8% Punjabi + 24.2% Kurd_SE @ 4.64
    18 54.7% GujaratiB + 45.3% Kurd_SE @ 4.67
    19 92.8% Pathan + 7.2% EHG @ 4.85
    20 82.4% Punjabi + 17.6% Balochi @ 4.91
    Last edited by Sapporo; 08-11-2016 at 11:15 PM.

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  13. #7
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    My results (Northwest European ancestry):

    Population
    Ancestral_North_Eurasian 19.12
    Ancestral_South_Eurasian -
    East_Asian -
    West_European_Hunter_Gartherer 45.06
    Natufian 35.83
    Sub_Saharan -

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  15. #8
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    England Ireland
    Admix Results (sorted):

    # Population Percent
    1 West_European_Hunter_Gartherer 40.42
    2 Natufian 37.86
    3 Ancestral_North_Eurasian 21.72

    Using 1 population approximation:
    1 Croatian @ 3.953593
    2 Hungarian @ 4.965858
    3 Romanian @ 5.798271
    4 Czech @ 6.229397
    5 French @ 6.445349
    6 Ukrainian @ 6.645546
    7 English @ 6.711285
    8 Bulgarian @ 7.078865
    9 Norwegian @ 7.290691
    10 Scottish @ 7.396870
    11 Spanish @ 9.382966
    12 Icelandic @ 9.546926
    13 Europe_LNBA @ 10.033398
    14 Albanian @ 11.693346
    15 Steppe_MLBA @ 12.218656
    16 Estonian @ 12.452640
    17 Greek @ 12.824142
    18 Lithuanian @ 13.386652
    19 Russian @ 13.669928
    20 Basque @ 13.780749

    Using 2 populations approximation:
    1 50% Europe_EN +50% Steppe_EMBA @ 2.556792


    Using 3 populations approximation:
    1 50% Georgian +25% Greek +25% Hungarian_KO1 @ 1.616416


    Using 4 populations approximation:
    1 EHG + Hungarian_KO1 + Levant_N + Sardinian @ 0.589947
    2 EHG + Hungarian_KO1 + Natufian + Sardinian @ 0.589947
    3 EHG + Levant_N + Sardinian + WHG @ 0.589947
    4 EHG + Natufian + Sardinian + WHG @ 0.589947
    5 Albanian + Georgian + Georgian + Hungarian_KO1 @ 1.496268
    6 Albanian + Georgian + Georgian + WHG @ 1.496268
    7 Assyrian + Icelandic + Icelandic + Lithuanian @ 1.525889
    8 Basque + Icelandic + Lezgin + Norwegian @ 1.555013
    9 Georgian + Icelandic + Icelandic + Icelandic @ 1.555500
    10 French + Georgian + Lithuanian + Lithuanian @ 1.568850
    Last edited by L1983; 08-11-2016 at 10:53 PM.

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  17. #9
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    J2a4h2f* (J-L192)
    mtDNA (M)
    H, U3b

    Turkey Ottoman Empire Ottoman Empire 2
    I posted in the other thread but I'll post here also.

    Me

    1 Natufian 50.94
    2 Ancestral_North_Eurasian 27.09
    3 West_European_Hunter_Gartherer 14.72
    4 East_Asian 5.11
    5 Ancestral_South_Eurasian 1.46
    6 Sub_Saharan 0.68

    Single Population Sharing:

    # Population (source) Distance
    1 Turkish 5.66
    2 Azeri 6.08
    3 Assyrian 7.41
    4 Georgian 7.54
    5 Druze 7.67
    6 Adygei 7.9
    7 Jew_Iranian 8.05
    8 Jew_iraqi 8.13
    9 Lebanese 8.36
    10 Syrian 8.64
    11 Armenia_ChL 8.83
    12 Balkar 9.24
    13 Iranian 9.39
    14 Cypriot 9.41
    15 Kumyk 9.61
    16 Chechen 10.04
    17 Iran_N_WC1 10.1
    18 Iran_recent 10.51
    19 Jordanian 10.55
    20 Kurd_C 10.67



    My aunt

    1 Natufian 52.26
    2 Ancestral_North_Eurasian 30.51
    3 West_European_Hunter_Gartherer 11.35
    4 Ancestral_South_Eurasian 4.09
    5 East_Asian 1.79

    Single Population Sharing:

    # Population (source) Distance
    1 Assyrian 3.71
    2 Georgian 3.73
    3 Jew_Iranian 4.5
    4 Jew_iraqi 5.21
    5 Iranian 5.9
    6 Kurd_C 6.12
    7 Kurd_F 6.96
    8 Iran_N_WC1 7.02
    9 Iran_recent 7.05
    10 Azeri 7.09
    11 Druze 9.01
    12 Iran_ChL 9.27
    13 Iran_LN 9.32
    14 Iranian_Mazandarani 9.5
    15 Adygei 10.02
    16 Iranian_Shirazi 10.16
    17 Chechen 10.79
    18 Lebanese 10.82
    19 Syrian

    My grandma

    1 Natufian 50.99
    2 Ancestral_North_Eurasian 28.87
    3 West_European_Hunter_Gartherer 14.61
    4 Ancestral_South_Eurasian 3.68
    5 East_Asian 1.85

    Single Population Sharing:

    # Population (source) Distance
    1 Georgian 4.99
    2 Assyrian 5.44
    3 Jew_Iranian 6.29
    4 Azeri 6.82
    5 Jew_iraqi 6.9
    6 Adygei 7.63
    7 Iranian 7.64
    8 Druze 7.7
    9 Iran_N_WC1 7.77
    10 Armenia_ChL 8.18
    11 Turkish 8.32
    12 Kurd_C 8.44
    13 Iran_recent 8.54
    14 Chechen 8.86
    15 Kumyk 9.28
    16 Lebanese 9.33
    17 Syrian 9.51
    18 Kurd_F 9.95
    19 Cypriot 10.27
    20 Lezgin 10.43

    My grandfather

    1 Natufian 52.05
    2 Ancestral_North_Eurasian 31.97
    3 West_European_Hunter_Gartherer 9.68
    4 Ancestral_South_Eurasian 3.22
    5 East_Asian 3.08

    Single Population Sharing:

    # Population (source) Distance
    1 Georgian 4.46
    2 Iranian 5.1
    3 Assyrian 5.19
    4 Kurd_F 5.28
    5 Kurd_C 5.36
    6 Jew_Iranian 5.96
    7 Jew_iraqi 6.3
    8 Iran_recent 6.47
    9 Azeri 6.63
    10 Iran_N_WC1 7.29
    11 Iran_ChL 7.71
    12 Iran_LN 7.77
    13 Iranian_Mazandarani 8.09
    14 Iranian_Shirazi 9.17
    15 Iranian_Lori 10.45
    16 Adygei 10.63
    17 Druze 10.99
    18 Chechen 11.27
    19 Iran_N 11.39
    20 Lezgin 12.08
    Last edited by Hanna; 08-12-2016 at 12:22 AM.

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  19. #10
    Banned
    Posts
    5,173
    Sex

    FARID - IRANIAN BALOCH

    # Population Percent
    1 Ancestral_North_Eurasian 41.33
    2 Natufian 39.2
    3 Ancestral_South_Eurasian 10.64
    4 Sub_Saharan 4.1
    5 East_Asian 2.7
    6 West_European_Hunter_Gartherer 2.02
    Using 1 population approximation:
    1 Makrani @ 1.827513
    2 Baloch_Iranian @ 2.226703
    3 Brahui @ 3.997602
    4 Balochi @ 4.633072
    5 Kurd_SE @ 6.057146
    6 CHG @ 9.329386
    7 Iran_N @ 9.545780
    8 Kalash @ 9.977983
    9 Iranian_Lori @ 10.537346
    10 Pathan @ 10.539520
    11 Iranian_Shirazi @ 11.505595
    12 Iranian_Mazandarani @ 11.575656
    13 Pashtun_Afghan @ 12.502123
    14 Sindhi @ 12.689663
    15 Iran_ChL @ 12.813694
    16 Iran_LN @ 13.500947
    17 Iran_recent @ 14.365224
    18 Kurd_C @ 14.837963
    19 Punjabi @ 15.079246
    20 Iranian @ 15.441460
    Using 2 populations approximation:
    1 50% Baloch_Iranian + 50% Makrani @ 1.492220
    Using 3 populations approximation:
    1 50% Baloch_Iranian + 25% Baloch_Iranian + 25% Kalash @ 1.060967
    Using 4 populations approximation:
    1 Baloch_Iranian + Baloch_Iranian + Baloch_Iranian + Kalash @ 1.060967
    2 Baloch_Iranian + Baloch_Iranian + Baloch_Iranian + Pathan @ 1.170448
    3 Baloch_Iranian + Baloch_Iranian + Kurd_SE + Makrani @ 1.300192
    4 Baloch_Iranian + Baloch_Iranian + Baloch_Iranian + Kurd_SE @ 1.370984
    5 Baloch_Iranian + Baloch_Iranian + Baloch_Iranian + Balochi @ 1.437913
    6 Baloch_Iranian + Baloch_Iranian + Balochi + Makrani @ 1.448579
    7 Baloch_Iranian + Baloch_Iranian + Iran_N + Sindhi @ 1.459142
    8 Baloch_Iranian + Baloch_Iranian + Brahui + Makrani @ 1.488103
    9 Baloch_Iranian + Baloch_Iranian + Makrani + Makrani @ 1.492220
    10 Baloch_Iranian + Makrani + Makrani + Makrani @ 1.502070

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